RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 PPFIA3O75145 1194 aa26.64■■□□□ 1.86
RBFOX1-206ENST00000535565 FMNL1O95466 1100 aaPredicted RBP26.64■■□□□ 1.86
RBFOX1-206ENST00000535565 MKL1Q969V6 931 aa26.64■■□□□ 1.86
RBFOX1-206ENST00000535565 SLC26A6Q9BXS9 759 aa26.64■■□□□ 1.86
RBFOX1-206ENST00000535565 DOCK1Q14185 1865 aa26.64■■□□□ 1.85
RBFOX1-206ENST00000535565 PHF20L1A8MW92 1017 aa26.63■■□□□ 1.85
RBFOX1-206ENST00000535565 BRD1O95696 1058 aa26.63■■□□□ 1.85
RBFOX1-206ENST00000535565 ASNSP08243 561 aa26.63■■□□□ 1.85
RBFOX1-206ENST00000535565 PARP1P09874 1014 aaKnown RBP26.63■■□□□ 1.85
RBFOX1-206ENST00000535565 FDPSP14324 419 aaKnown RBP26.63■■□□□ 1.85
RBFOX1-206ENST00000535565 EAPPQ56P03 285 aaPredicted RBP26.63■■□□□ 1.85
RBFOX1-206ENST00000535565 WASF1Q92558 559 aa26.63■■□□□ 1.85
RBFOX1-206ENST00000535565 GINM1Q9NU53 330 aa26.63■■□□□ 1.85
RBFOX1-206ENST00000535565 VPS37CA5D8V6 355 aaPredicted RBP26.63■■□□□ 1.85
RBFOX1-206ENST00000535565 JAG1P78504 1218 aa26.63■■□□□ 1.85
RBFOX1-206ENST00000535565 AKAP17AQ02040 695 aaKnown RBP26.63■■□□□ 1.85
RBFOX1-206ENST00000535565 PRAMEF18Q5VWM3 479 aa26.63■■□□□ 1.85
RBFOX1-206ENST00000535565 LZTS2Q9BRK4 669 aa26.63■■□□□ 1.85
RBFOX1-206ENST00000535565 RNF26Q9BY78 433 aaPredicted RBP26.63■■□□□ 1.85
RBFOX1-206ENST00000535565 ARHGEF10LQ9HCE6 1279 aa26.63■■□□□ 1.85
RBFOX1-206ENST00000535565 SYNPO2Q9UMS6 1093 aa26.63■■□□□ 1.85
RBFOX1-206ENST00000535565 POTECB2RU33 542 aa26.62■■□□□ 1.85
RBFOX1-206ENST00000535565 H3BQV1 296 aa26.62■■□□□ 1.85
RBFOX1-206ENST00000535565 CTNND1O60716 968 aaKnown RBP26.62■■□□□ 1.85
RBFOX1-206ENST00000535565 PLEKHA8P1O95397 391 aa26.62■■□□□ 1.85
RBFOX1-206ENST00000535565 IFFO2Q5TF58 517 aa26.62■■□□□ 1.85
RBFOX1-206ENST00000535565 KRT26Q7Z3Y9 468 aa26.62■■□□□ 1.85
RBFOX1-206ENST00000535565 NBPF11Q86T75 865 aa26.62■■□□□ 1.85
RBFOX1-206ENST00000535565 CCDC82Q8N4S0 544 aa26.62■■□□□ 1.85
RBFOX1-206ENST00000535565 MAD2L2Q9UI95 211 aa26.62■■□□□ 1.85
RBFOX1-206ENST00000535565 CMTR1Q8N1G2 835 aaKnown RBP26.61■■□□□ 1.85
RBFOX1-206ENST00000535565 ZDHHC9Q9Y397 364 aa26.61■■□□□ 1.85
RBFOX1-206ENST00000535565 PALM3A6NDB9 673 aaPredicted RBP26.6■■□□□ 1.85
RBFOX1-206ENST00000535565 DEXIO95424 95 aa26.6■■□□□ 1.85
RBFOX1-206ENST00000535565 ZSCAN22P10073 491 aaPredicted RBP26.6■■□□□ 1.85
RBFOX1-206ENST00000535565 PDHBP11177 359 aa26.6■■□□□ 1.85
RBFOX1-206ENST00000535565 ASPRV1Q53RT3 343 aa26.6■■□□□ 1.85
RBFOX1-206ENST00000535565 TNPO1Q92973 898 aaKnown RBP26.6■■□□□ 1.85
RBFOX1-206ENST00000535565 SSC5DA1L4H1 1573 aa26.59■■□□□ 1.85
RBFOX1-206ENST00000535565 ADM5C9JUS6 153 aa26.59■■□□□ 1.85
RBFOX1-206ENST00000535565 USP48Q86UV5 1035 aa26.59■■□□□ 1.85
RBFOX1-206ENST00000535565 SIAH1Q8IUQ4 282 aa26.59■■□□□ 1.85
RBFOX1-206ENST00000535565 RBM27Q9P2N5 1060 aaKnown RBP26.59■■□□□ 1.85
RBFOX1-206ENST00000535565 MTMR6Q9Y217 621 aa26.59■■□□□ 1.85
RBFOX1-206ENST00000535565 CNTNAP5Q8WYK1 1306 aa26.59■■□□□ 1.85
RBFOX1-206ENST00000535565 USP17L5A8MUK1 530 aa26.58■■□□□ 1.85
RBFOX1-206ENST00000535565 SNHG28P0DPA3 235 aa26.58■■□□□ 1.85
RBFOX1-206ENST00000535565 FUT2Q10981 343 aa26.58■■□□□ 1.85
RBFOX1-206ENST00000535565 FOXD4L5Q5VV16 416 aaPredicted RBP26.58■■□□□ 1.85
RBFOX1-206ENST00000535565 USP17L2Q6R6M4 530 aa26.58■■□□□ 1.85
RBFOX1-206ENST00000535565 STAG2Q8N3U4 1231 aa26.58■■□□□ 1.85
RBFOX1-206ENST00000535565 SRBD1Q8N5C6 995 aaKnown RBP26.58■■□□□ 1.85
RBFOX1-206ENST00000535565 FOXD4L4Q8WXT5 416 aaPredicted RBP26.58■■□□□ 1.85
RBFOX1-206ENST00000535565 C8orf76Q96K31 380 aa26.58■■□□□ 1.85
RBFOX1-206ENST00000535565 ALG1Q9BT22 464 aa26.58■■□□□ 1.85
RBFOX1-206ENST00000535565 SH2D4AQ9H788 454 aa26.58■■□□□ 1.85
RBFOX1-206ENST00000535565 ZNF112Q9UJU3 913 aa26.58■■□□□ 1.85
RBFOX1-206ENST00000535565 KLRF2D3W0D1 207 aa26.58■■□□□ 1.85
RBFOX1-206ENST00000535565 PRPF3O43395 683 aaKnown RBP26.58■■□□□ 1.85
RBFOX1-206ENST00000535565 RGS22Q8NE09 1264 aa26.58■■□□□ 1.85
RBFOX1-206ENST00000535565 GMCL1P1Q8NEA9 526 aa26.58■■□□□ 1.85
RBFOX1-206ENST00000535565 WRNIP1Q96S55 665 aa26.58■■□□□ 1.85
RBFOX1-206ENST00000535565 RAD21O60216 631 aa26.57■■□□□ 1.84
RBFOX1-206ENST00000535565 FOSBP53539 338 aa26.57■■□□□ 1.84
RBFOX1-206ENST00000535565 GPATCH4Q5T3I0 446 aaKnown RBP26.57■■□□□ 1.84
RBFOX1-206ENST00000535565 DCAF4Q8WV16 495 aa26.57■■□□□ 1.84
RBFOX1-206ENST00000535565 GOLGA8HP0CJ92 632 aa26.56■■□□□ 1.84
RBFOX1-206ENST00000535565 VEGFAP15692 232 aaPredicted RBP26.56■■□□□ 1.84
RBFOX1-206ENST00000535565 NF2P35240 595 aa26.56■■□□□ 1.84
RBFOX1-206ENST00000535565 TRIM29Q14134 588 aa26.56■■□□□ 1.84
RBFOX1-206ENST00000535565 SLFN13Q68D06 897 aa26.56■■□□□ 1.84
RBFOX1-206ENST00000535565 CLEC11AQ9Y240 323 aa26.56■■□□□ 1.84
RBFOX1-206ENST00000535565 F13A1P00488 732 aa26.55■■□□□ 1.84
RBFOX1-206ENST00000535565 SMARCA1P28370 1054 aa26.55■■□□□ 1.84
RBFOX1-206ENST00000535565 ZNF543Q08ER8 600 aa26.55■■□□□ 1.84
RBFOX1-206ENST00000535565 CCDC96Q2M329 555 aa26.55■■□□□ 1.84
RBFOX1-206ENST00000535565 CDC37L1Q7L3B6 337 aa26.55■■□□□ 1.84
RBFOX1-206ENST00000535565 RASGRP2Q7LDG7 609 aa26.55■■□□□ 1.84
RBFOX1-206ENST00000535565 SPZ1Q9BXG8 430 aa26.55■■□□□ 1.84
RBFOX1-206ENST00000535565 GOPCQ9HD26 462 aa26.55■■□□□ 1.84
RBFOX1-206ENST00000535565 TMX2Q9Y320 296 aa26.55■■□□□ 1.84
RBFOX1-206ENST00000535565 ATP6V1DQ9Y5K8 247 aa26.55■■□□□ 1.84
RBFOX1-206ENST00000535565 V9GY48 417 aaPredicted RBP26.55■■□□□ 1.84
RBFOX1-206ENST00000535565 FRMPD2Q68DX3 1309 aaPredicted RBP26.55■■□□□ 1.84
RBFOX1-206ENST00000535565 F5H6K3 240 aa26.54■■□□□ 1.84
RBFOX1-206ENST00000535565 PPP1R12BO60237 982 aaPredicted RBP26.54■■□□□ 1.84
RBFOX1-206ENST00000535565 INPP5BP32019 993 aa26.54■■□□□ 1.84
RBFOX1-206ENST00000535565 SLC1A4P43007 532 aa26.54■■□□□ 1.84
RBFOX1-206ENST00000535565 KLRC3Q07444 240 aa26.54■■□□□ 1.84
RBFOX1-206ENST00000535565 SCYL3Q8IZE3 742 aa26.54■■□□□ 1.84
RBFOX1-206ENST00000535565 KLRG1Q96E93 195 aa26.54■■□□□ 1.84
RBFOX1-206ENST00000535565 GBP4Q96PP9 640 aa26.54■■□□□ 1.84
RBFOX1-206ENST00000535565 PICK1Q9NRD5 415 aa26.54■■□□□ 1.84
RBFOX1-206ENST00000535565 BAZ2BQ9UIF8 2168 aaKnown RBP26.54■■□□□ 1.84
RBFOX1-206ENST00000535565 A0A1W2PRG0 241 aa26.54■■□□□ 1.84
RBFOX1-206ENST00000535565 XBP1P17861 261 aa26.54■■□□□ 1.84
RBFOX1-206ENST00000535565 FBXO18Q8NFZ0 1043 aa26.54■■□□□ 1.84
RBFOX1-206ENST00000535565 RRAGCQ9HB90 399 aa26.54■■□□□ 1.84
RBFOX1-206ENST00000535565 CDCA5Q96FF9 252 aa26.53■■□□□ 1.84
RBFOX1-206ENST00000535565 GMCL1Q96IK5 515 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms