RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 WDR18Q9BV38 432 aa14.36□□□□□ -0.11
SCARB1-204ENST00000535005 ZNF408Q9H9D4 720 aa14.36□□□□□ -0.11
SCARB1-204ENST00000535005 SENP2Q9HC62 589 aa14.36□□□□□ -0.11
SCARB1-204ENST00000535005 PICK1Q9NRD5 415 aa14.36□□□□□ -0.11
SCARB1-204ENST00000535005 STX8Q9UNK0 236 aa14.36□□□□□ -0.11
SCARB1-204ENST00000535005 CSADQ9Y600 493 aa14.36□□□□□ -0.11
SCARB1-204ENST00000535005 SNCAIPQ9Y6H5 919 aa14.36□□□□□ -0.11
SCARB1-204ENST00000535005 USP17L5A8MUK1 530 aa14.35□□□□□ -0.11
SCARB1-204ENST00000535005 CD2BP2O95400 341 aaKnown RBP14.35□□□□□ -0.11
SCARB1-204ENST00000535005 EEF2P13639 858 aaKnown RBP14.35□□□□□ -0.11
SCARB1-204ENST00000535005 PTPRAP18433 802 aa14.35□□□□□ -0.11
SCARB1-204ENST00000535005 VGLL4Q14135 290 aa14.35□□□□□ -0.11
SCARB1-204ENST00000535005 KLHL40Q2TBA0 621 aa14.35□□□□□ -0.11
SCARB1-204ENST00000535005 MOB2Q70IA6 237 aa14.35□□□□□ -0.11
SCARB1-204ENST00000535005 ZNF274Q96GC6 653 aaPredicted RBP14.35□□□□□ -0.11
SCARB1-204ENST00000535005 CLIP2Q9UDT6 1046 aa14.35□□□□□ -0.11
SCARB1-204ENST00000535005 LIMCH1Q9UPQ0 1083 aa14.35□□□□□ -0.11
SCARB1-204ENST00000535005 UBE2Q2LH0YL09 131 aa14.34□□□□□ -0.11
SCARB1-204ENST00000535005 K7ELQ4 463 aaPredicted RBP14.34□□□□□ -0.11
SCARB1-204ENST00000535005 RCAN1P53805 252 aa14.34□□□□□ -0.11
SCARB1-204ENST00000535005 CLEC10AQ8IUN9 316 aa14.34□□□□□ -0.11
SCARB1-204ENST00000535005 SPRYD3Q8NCJ5 442 aa14.34□□□□□ -0.11
SCARB1-204ENST00000535005 KAT14Q9H8E8 782 aa14.34□□□□□ -0.11
SCARB1-204ENST00000535005 TMX2Q9Y320 296 aa14.34□□□□□ -0.11
SCARB1-204ENST00000535005 DOCK1Q14185 1865 aa14.34□□□□□ -0.11
SCARB1-204ENST00000535005 TRPM7Q96QT4 1865 aa14.34□□□□□ -0.11
SCARB1-204ENST00000535005 CCDC69A6NI79 296 aa14.34□□□□□ -0.11
SCARB1-204ENST00000535005 OFD1O75665 1012 aa14.34□□□□□ -0.11
SCARB1-204ENST00000535005 APOBRQ0VD83 1088 aa14.34□□□□□ -0.11
SCARB1-204ENST00000535005 ZSCAN31Q96LW9 406 aaPredicted RBP14.34□□□□□ -0.11
SCARB1-204ENST00000535005 ARHGEF10LQ9HCE6 1279 aa14.34□□□□□ -0.11
SCARB1-204ENST00000535005 TPCN1Q9ULQ1 816 aa14.34□□□□□ -0.11
SCARB1-204ENST00000535005 ATAD5Q96QE3 1844 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 KLF18A0A0U1RQI7 1052 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 A0A1W2PRG0 241 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 SPDYE5A6NIY4 337 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 DDAH1O94760 285 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 ZNF445P59923 1031 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 TROAPQ12815 778 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 APOA5Q6Q788 366 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 NFXL1Q6ZNB6 911 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 CATIPQ7Z7H3 387 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 ERO1BQ86YB8 467 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 ZNF654Q8IZM8 581 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 PNMA1Q8ND90 353 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 ACER1Q8TDN7 264 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 MAP3K14Q99558 947 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 SH2D4AQ9H788 454 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 AS3MTQ9HBK9 375 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 SLC12A7Q9Y666 1083 aa14.33□□□□□ -0.12
SCARB1-204ENST00000535005 CALM1P0DP23 149 aa14.32□□□□□ -0.12
SCARB1-204ENST00000535005 CALM2P0DP24 149 aa14.32□□□□□ -0.12
SCARB1-204ENST00000535005 CALM3P0DP25 149 aa14.32□□□□□ -0.12
SCARB1-204ENST00000535005 PDIA3P30101 505 aaKnown RBP14.32□□□□□ -0.12
SCARB1-204ENST00000535005 PPATQ06203 517 aa14.32□□□□□ -0.12
SCARB1-204ENST00000535005 SYNE3Q6ZMZ3 975 aa14.32□□□□□ -0.12
SCARB1-204ENST00000535005 CLMNQ96JQ2 1002 aa14.32□□□□□ -0.12
SCARB1-204ENST00000535005 ZMYND15Q9H091 742 aa14.32□□□□□ -0.12
SCARB1-204ENST00000535005 KIAA1683Q9H0B3 1180 aa14.32□□□□□ -0.12
SCARB1-204ENST00000535005 SH2B1Q9NRF2 756 aaPredicted RBP14.32□□□□□ -0.12
SCARB1-204ENST00000535005 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.32□□□□□ -0.12
SCARB1-204ENST00000535005 ZHX2Q9Y6X8 837 aa14.32□□□□□ -0.12
SCARB1-204ENST00000535005 OTOFQ9HC10 1997 aa14.32□□□□□ -0.12
SCARB1-204ENST00000535005 NID2Q14112 1375 aa14.32□□□□□ -0.12
SCARB1-204ENST00000535005 ZBTB43O43298 467 aa14.31□□□□□ -0.12
SCARB1-204ENST00000535005 NASPP49321 788 aaPredicted RBP14.31□□□□□ -0.12
SCARB1-204ENST00000535005 ATP2B2Q01814 1243 aa14.31□□□□□ -0.12
SCARB1-204ENST00000535005 MTERF4Q7Z6M4 381 aaKnown RBP14.31□□□□□ -0.12
SCARB1-204ENST00000535005 CCDC84Q86UT8 332 aaPredicted RBP14.31□□□□□ -0.12
SCARB1-204ENST00000535005 ZNF280CQ8ND82 737 aa14.31□□□□□ -0.12
SCARB1-204ENST00000535005 GMCL1P1Q8NEA9 526 aa14.31□□□□□ -0.12
SCARB1-204ENST00000535005 LARP6Q9BRS8 491 aaKnown RBP14.31□□□□□ -0.12
SCARB1-204ENST00000535005 ELP3Q9H9T3 547 aa14.31□□□□□ -0.12
SCARB1-204ENST00000535005 HPS5Q9UPZ3 1129 aa14.31□□□□□ -0.12
SCARB1-204ENST00000535005 AFG3L2Q9Y4W6 797 aa14.31□□□□□ -0.12
SCARB1-204ENST00000535005 PFKFB2O60825 505 aa14.31□□□□□ -0.12
SCARB1-204ENST00000535005 SNHG28P0DPA3 235 aa14.31□□□□□ -0.12
SCARB1-204ENST00000535005 ECE1P42892 770 aa14.31□□□□□ -0.12
SCARB1-204ENST00000535005 PPP2R5BQ15173 497 aa14.31□□□□□ -0.12
SCARB1-204ENST00000535005 ME3Q16798 604 aa14.31□□□□□ -0.12
SCARB1-204ENST00000535005 LRRC47Q8N1G4 583 aaKnown RBP14.31□□□□□ -0.12
SCARB1-204ENST00000535005 SLC10A4Q96EP9 437 aa14.31□□□□□ -0.12
SCARB1-204ENST00000535005 C19orf81C9J6K1 198 aa14.3□□□□□ -0.12
SCARB1-204ENST00000535005 USP17L10C9JJH3 530 aa14.3□□□□□ -0.12
SCARB1-204ENST00000535005 F5H6K3 240 aa14.3□□□□□ -0.12
SCARB1-204ENST00000535005 CXCL11O14625 94 aa14.3□□□□□ -0.12
SCARB1-204ENST00000535005 NUCB2P80303 420 aa14.3□□□□□ -0.12
SCARB1-204ENST00000535005 KLRC3Q07444 240 aa14.3□□□□□ -0.12
SCARB1-204ENST00000535005 SPP2Q13103 211 aa14.3□□□□□ -0.12
SCARB1-204ENST00000535005 PPIL2Q13356 520 aa14.3□□□□□ -0.12
SCARB1-204ENST00000535005 GAS2L3Q86XJ1 694 aa14.3□□□□□ -0.12
SCARB1-204ENST00000535005 GMCL1Q96IK5 515 aa14.3□□□□□ -0.12
SCARB1-204ENST00000535005 TMX3Q96JJ7 454 aa14.3□□□□□ -0.12
SCARB1-204ENST00000535005 VCPKMTQ9H867 229 aa14.3□□□□□ -0.12
SCARB1-204ENST00000535005 GOLGA8BA8MQT2 603 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 LARGE1O95461 756 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 MSNP26038 577 aaKnown RBP14.29□□□□□ -0.12
SCARB1-204ENST00000535005 USP14P54578 494 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 BACE1P56817 501 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 HUNKP57058 714 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms