RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 PPARAQ07869 468 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 SLC15A2Q16348 729 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 NAA16Q6N069 864 aaPredicted RBP10.29□□□□□ -0.76
SF3B2-216ENST00000534765 CCDC82Q8N4S0 544 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 RTFDC1Q9BY42 306 aaPredicted RBP10.29□□□□□ -0.76
SF3B2-216ENST00000534765 ACBD3Q9H3P7 528 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 A0A087WWV3 80 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 ERLIN2O94905 339 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 LIG1P18858 919 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 KRT32Q14532 448 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 NAA25Q14CX7 972 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 SYCP1Q15431 976 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 SLC35G1Q2M3R5 365 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 NAIF1Q69YI7 327 aaPredicted RBP10.29□□□□□ -0.76
SF3B2-216ENST00000534765 PGBD1Q96JS3 809 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 NAPBQ9H115 298 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 ADAM21Q9UKJ8 722 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 F8W031 263 aaPredicted RBP10.28□□□□□ -0.76
SF3B2-216ENST00000534765 PPEF1O14829 653 aaPredicted RBP10.28□□□□□ -0.76
SF3B2-216ENST00000534765 SSBP05455 408 aaKnown RBP eCLIP10.28□□□□□ -0.76
SF3B2-216ENST00000534765 ALX1Q15699 326 aa10.28□□□□□ -0.76
SF3B2-216ENST00000534765 FOXR1Q6PIV2 292 aa10.28□□□□□ -0.76
SF3B2-216ENST00000534765 APOA5Q6Q788 366 aa10.28□□□□□ -0.76
SF3B2-216ENST00000534765 MMS22LQ6ZRQ5 1243 aa10.28□□□□□ -0.76
SF3B2-216ENST00000534765 GOLGA8BA8MQT2 603 aa10.28□□□□□ -0.76
SF3B2-216ENST00000534765 AKNAD1Q5T1N1 836 aa10.28□□□□□ -0.76
SF3B2-216ENST00000534765 NBPF11Q86T75 865 aa10.28□□□□□ -0.76
SF3B2-216ENST00000534765 MICU3Q86XE3 530 aa10.28□□□□□ -0.76
SF3B2-216ENST00000534765 FBXL16Q8N461 479 aa10.28□□□□□ -0.76
SF3B2-216ENST00000534765 NCOA7Q8NI08 942 aa10.28□□□□□ -0.76
SF3B2-216ENST00000534765 ZSCAN31Q96LW9 406 aaPredicted RBP10.28□□□□□ -0.76
SF3B2-216ENST00000534765 WNT7AO00755 349 aa10.28□□□□□ -0.76
SF3B2-216ENST00000534765 IRF6O14896 467 aa10.28□□□□□ -0.76
SF3B2-216ENST00000534765 KCNA3P22001 575 aa10.28□□□□□ -0.76
SF3B2-216ENST00000534765 SEC23AQ15436 765 aa10.28□□□□□ -0.76
SF3B2-216ENST00000534765 ZFPM1Q8IX07 1006 aa10.28□□□□□ -0.76
SF3B2-216ENST00000534765 IL1R1P14778 569 aa10.27□□□□□ -0.76
SF3B2-216ENST00000534765 ZNF513Q8N8E2 541 aaPredicted RBP10.27□□□□□ -0.76
SF3B2-216ENST00000534765 SGSM3Q96HU1 749 aa10.27□□□□□ -0.76
SF3B2-216ENST00000534765 DBNDD1Q9H9R9 158 aa10.27□□□□□ -0.76
SF3B2-216ENST00000534765 DDX4Q9NQI0 724 aaKnown RBP10.27□□□□□ -0.76
SF3B2-216ENST00000534765 IL17RBQ9NRM6 502 aa10.27□□□□□ -0.76
SF3B2-216ENST00000534765 SAP30BPQ9UHR5 308 aaKnown RBP10.27□□□□□ -0.76
SF3B2-216ENST00000534765 MRVI1Q9Y6F6 885 aa10.27□□□□□ -0.76
SF3B2-216ENST00000534765 MYH1P12882 1939 aa10.27□□□□□ -0.77
SF3B2-216ENST00000534765 STAG1Q8WVM7 1258 aa10.27□□□□□ -0.77
SF3B2-216ENST00000534765 ZNF75DP51815 510 aa10.27□□□□□ -0.77
SF3B2-216ENST00000534765 RHBDL3P58872 404 aa10.27□□□□□ -0.77
SF3B2-216ENST00000534765 CLEC10AQ8IUN9 316 aa10.27□□□□□ -0.77
SF3B2-216ENST00000534765 ENAHQ8N8S7 591 aaPredicted RBP10.27□□□□□ -0.77
SF3B2-216ENST00000534765 LRRN4CLQ8ND94 238 aa10.27□□□□□ -0.77
SF3B2-216ENST00000534765 C7orf43Q8WVR3 580 aa10.27□□□□□ -0.77
SF3B2-216ENST00000534765 BRIP1Q9BX63 1249 aa10.27□□□□□ -0.77
SF3B2-216ENST00000534765 ANKRD2Q9GZV1 360 aa10.27□□□□□ -0.77
SF3B2-216ENST00000534765 CBX8Q9HC52 389 aa10.27□□□□□ -0.77
SF3B2-216ENST00000534765 MYH6P13533 1939 aa10.27□□□□□ -0.77
SF3B2-216ENST00000534765 QSER1Q2KHR3 1735 aa10.27□□□□□ -0.77
SF3B2-216ENST00000534765 N4BP2L2Q92802 583 aaPredicted RBP10.27□□□□□ -0.77
SF3B2-216ENST00000534765 ATP6V0A2Q9Y487 856 aa10.27□□□□□ -0.77
SF3B2-216ENST00000534765 C6orf229H3BNL8 230 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 EIF3JO75822 258 aaKnown RBP10.26□□□□□ -0.77
SF3B2-216ENST00000534765 KIAA0754O94854 1291 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 GCKP35557 465 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 SCNN1DP51172 638 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 NAP1L1P55209 391 aaKnown RBP10.26□□□□□ -0.77
SF3B2-216ENST00000534765 GTF2IP78347 998 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 PPARDQ03181 441 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 FBXW10Q5XX13 1052 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 RCSD1Q6JBY9 416 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 PDILTQ8N807 584 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 ZNF274Q96GC6 653 aaPredicted RBP10.26□□□□□ -0.77
SF3B2-216ENST00000534765 RBM17Q96I25 401 aaKnown RBP10.26□□□□□ -0.77
SF3B2-216ENST00000534765 CLNS1AP54105 237 aaKnown RBP10.26□□□□□ -0.77
SF3B2-216ENST00000534765 CACNB3P54284 484 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 EARS2Q5JPH6 523 aaKnown RBP10.26□□□□□ -0.77
SF3B2-216ENST00000534765 TGFBRAP1Q8WUH2 860 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 CRAMP1Q96RY5 1269 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 ANGEL1Q9UNK9 670 aaKnown RBP10.26□□□□□ -0.77
SF3B2-216ENST00000534765 SCAF8Q9UPN6 1271 aaKnown RBP10.26□□□□□ -0.77
SF3B2-216ENST00000534765 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.26□□□□□ -0.77
SF3B2-216ENST00000534765 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.26□□□□□ -0.771e-19■■■■□ 21.2
SF3B2-216ENST00000534765 FHOD1Q9Y613 1164 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 DNAH12Q6ZR08 3092 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 ZMYM6O95789 1325 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 MUM1L1Q5H9M0 696 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 TMC6Q7Z403 805 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 MAPKAPK5Q8IW41 473 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 RBM28Q9NW13 759 aaKnown RBP10.26□□□□□ -0.77
SF3B2-216ENST00000534765 DACT1Q9NYF0 836 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 GGA1Q9UJY5 639 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 LEMD3Q9Y2U8 911 aa10.26□□□□□ -0.77
SF3B2-216ENST00000534765 FAM205CA6NFA0 338 aa10.25□□□□□ -0.77
SF3B2-216ENST00000534765 KIF1CO43896 1103 aaKnown RBP10.25□□□□□ -0.77
SF3B2-216ENST00000534765 PLEKHA8P1O95397 391 aa10.25□□□□□ -0.77
SF3B2-216ENST00000534765 RNF187Q5TA31 235 aaPredicted RBP10.25□□□□□ -0.77
SF3B2-216ENST00000534765 AP1ARQ63HQ0 302 aa10.25□□□□□ -0.77
SF3B2-216ENST00000534765 KIRREL3Q8IZU9 778 aa10.25□□□□□ -0.77
SF3B2-216ENST00000534765 ERCC4Q92889 916 aaPredicted RBP10.25□□□□□ -0.77
SF3B2-216ENST00000534765 CPVLQ9H3G5 476 aa10.25□□□□□ -0.77
SF3B2-216ENST00000534765 PDE11AQ9HCR9 933 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms