RNA–Protein interactions for RNA: ENST00000534638.1

ME3-211, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-211ENST00000534638 ALBP02768 609 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 HOXD8P13378 290 aaPredicted RBP4.76□□□□□ -1.65
ME3-211ENST00000534638 CPEP16870 476 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 EIF2AK2P19525 551 aaKnown RBP4.76□□□□□ -1.65
ME3-211ENST00000534638 COL8A1P27658 744 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 GRIA2P42262 883 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 ID4P47928 161 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 NEK4P51957 841 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 NRLP54845 237 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 PPP2R2AP63151 447 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 TCIRG1Q13488 830 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 SETDB1Q15047 1291 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 ABCB5Q2M3G0 1257 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 ZC3H12BQ5HYM0 836 aaKnown RBP4.76□□□□□ -1.65
ME3-211ENST00000534638 BRAPQ7Z569 592 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 NECAB2Q7Z6G3 386 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 FGD2Q7Z6J4 655 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 TAB3Q8N5C8 712 aaPredicted RBP4.76□□□□□ -1.65
ME3-211ENST00000534638 GPBAR1Q8TDU6 330 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 DDX1Q92499 740 aaKnown RBP4.76□□□□□ -1.65
ME3-211ENST00000534638 TIFAQ96CG3 184 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 IPO9Q96P70 1041 aaKnown RBP4.76□□□□□ -1.65
ME3-211ENST00000534638 AARSD1Q9BTE6 412 aaKnown RBP4.76□□□□□ -1.65
ME3-211ENST00000534638 EMILIN2Q9BXX0 1053 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 LACRTQ9GZZ8 138 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 EPN3Q9H201 632 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 SLC6A14Q9UN76 642 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 PHLDB1Q86UU1 1377 aa4.76□□□□□ -1.65
ME3-211ENST00000534638 CCDC163A0A0D9SF12 145 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 VSTM5A8MXK1 200 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 M0R082 166 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 AGRPO00253 132 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 GFRA2O00451 464 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 IFRD1O00458 451 aaPredicted RBP4.75□□□□□ -1.65
ME3-211ENST00000534638 GABRDO14764 452 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 TNFRSF10CO14798 259 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 PRODHO43272 600 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 TBX1O43435 398 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 MAP3K6O95382 1288 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 ECEL1O95672 775 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 GHRHP01286 108 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 TP53P04637 393 aaPredicted RBP4.75□□□□□ -1.65
ME3-211ENST00000534638 GSTP1P09211 210 aaKnown RBP4.75□□□□□ -1.65
ME3-211ENST00000534638 ESRRAP11474 423 aaPredicted RBP4.75□□□□□ -1.65
ME3-211ENST00000534638 RAG1P15918 1043 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 GPLD1P80108 840 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 SKOR2Q2VWA4 1001 aaPredicted RBP4.75□□□□□ -1.65
ME3-211ENST00000534638 FAM102BQ5T8I3 360 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 C8orf86Q6ZUL3 223 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 PPFIBP1Q86W92 1011 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 PASD1Q8IV76 773 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 MICALL1Q8N3F8 863 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 PPM1KQ8N3J5 372 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 CNTD1Q8N815 330 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 ZNF417Q8TAU3 575 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 SLC7A14Q8TBB6 771 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 CHMP4CQ96CF2 233 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 TRIM11Q96F44 468 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 ZNF587Q96SQ5 575 aaPredicted RBP4.75□□□□□ -1.65
ME3-211ENST00000534638 PLVAPQ9BX97 442 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 MRPL4Q9BYD3 311 aaKnown RBP4.75□□□□□ -1.65
ME3-211ENST00000534638 RHOBTB2Q9BYZ6 727 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 MAF1Q9H063 256 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 PPCSQ9HAB8 311 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 TRIM39Q9HCM9 518 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 SH2B1Q9NRF2 756 aaPredicted RBP4.75□□□□□ -1.65
ME3-211ENST00000534638 DNAJB12Q9NXW2 375 aaKnown RBP4.75□□□□□ -1.65
ME3-211ENST00000534638 NOP53Q9NZM5 478 aaKnown RBP4.75□□□□□ -1.65
ME3-211ENST00000534638 LRP2BPQ9P2M1 347 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 APEX2Q9UBZ4 518 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 SOX13Q9UN79 622 aa4.75□□□□□ -1.65
ME3-211ENST00000534638 TNPO3Q9Y5L0 923 aaKnown RBP4.75□□□□□ -1.65
ME3-211ENST00000534638 TNKSO95271 1327 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 PRR36Q9H6K5 1346 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 PRAMEF27A3QJZ7 478 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 BLACEA4D250 179 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 KRBA1A5PL33 1030 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 DCDC2CA8MYV0 355 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 CHURC1-FNTBB4DL54 471 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 OPA1O60313 960 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 SMNDC1O75940 238 aaKnown RBP eCLIP4.74□□□□□ -1.65
ME3-211ENST00000534638 EPHX1P07099 455 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 CDC25BP30305 580 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 NEK3P51956 506 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 FOXD4Q12950 439 aaPredicted RBP4.74□□□□□ -1.65
ME3-211ENST00000534638 MLECQ14165 292 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 PLA2G4EQ3MJ16 856 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 LONRF3Q496Y0 759 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 RNF219Q5W0B1 726 aaPredicted RBP4.74□□□□□ -1.65
ME3-211ENST00000534638 IL31Q6EBC2 164 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 GPAT2Q6NUI2 795 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 C20orf204Q6ZNR8 217 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 ALYREFQ86V81 257 aaKnown RBP4.74□□□□□ -1.65
ME3-211ENST00000534638 SPATS2Q86XZ4 545 aaKnown RBP4.74□□□□□ -1.65
ME3-211ENST00000534638 TCEAL8Q8IYN2 117 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 MAGEB6Q8N7X4 407 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 SVIPQ8NHG7 77 aa4.74□□□□□ -1.65
ME3-211ENST00000534638 JPH3Q8WXH2 748 aaPredicted RBP4.74□□□□□ -1.65
ME3-211ENST00000534638 ZNF512BQ96KM6 892 aaPredicted RBP4.74□□□□□ -1.65
ME3-211ENST00000534638 FGD4Q96M96 766 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms