RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-231ENST00000534382 FAM47AQ5JRC9 791 aa17.24■□□□□ 0.35
CTSB-231ENST00000534382 KIAA1755Q5JYT7 1200 aa17.24■□□□□ 0.35
CTSB-231ENST00000534382 NEDD1Q8NHV4 660 aa17.24■□□□□ 0.35
CTSB-231ENST00000534382 INCENPQ9NQS7 918 aa17.24■□□□□ 0.35
CTSB-231ENST00000534382 RBPJLQ9UBG7 517 aa17.24■□□□□ 0.35
CTSB-231ENST00000534382 FGRP09769 529 aa17.23■□□□□ 0.35
CTSB-231ENST00000534382 CHMLP26374 656 aa17.23■□□□□ 0.35
CTSB-231ENST00000534382 SPICE1Q8N0Z3 855 aa17.23■□□□□ 0.35
CTSB-231ENST00000534382 RUFY2Q8WXA3 655 aa17.23■□□□□ 0.35
CTSB-231ENST00000534382 DSCC1Q9BVC3 393 aa17.23■□□□□ 0.35
CTSB-231ENST00000534382 GOPCQ9HD26 462 aa17.23■□□□□ 0.35
CTSB-231ENST00000534382 TXNRD2Q9NNW7 524 aa17.23■□□□□ 0.35
CTSB-231ENST00000534382 MTMR4Q9NYA4 1195 aa17.23■□□□□ 0.35
CTSB-231ENST00000534382 SRRDQ9UH36 339 aa17.23■□□□□ 0.35
CTSB-231ENST00000534382 TACC3Q9Y6A5 838 aa17.23■□□□□ 0.35
CTSB-231ENST00000534382 ORC4O43929 436 aa17.22■□□□□ 0.35
CTSB-231ENST00000534382 COG2Q14746 738 aa17.22■□□□□ 0.35
CTSB-231ENST00000534382 POTEEQ6S8J3 1075 aa17.22■□□□□ 0.35
CTSB-231ENST00000534382 LBX2Q6XYB7 198 aa17.22■□□□□ 0.35
CTSB-231ENST00000534382 GPRC5AQ8NFJ5 357 aa17.22■□□□□ 0.35
CTSB-231ENST00000534382 CEP95Q96GE4 821 aa17.22■□□□□ 0.35
CTSB-231ENST00000534382 TANGO6Q9C0B7 1094 aa17.22■□□□□ 0.35
CTSB-231ENST00000534382 HOXC10Q9NYD6 342 aa17.22■□□□□ 0.35
CTSB-231ENST00000534382 CLIP2Q9UDT6 1046 aa17.22■□□□□ 0.35
CTSB-231ENST00000534382 PTCH2Q9Y6C5 1203 aa17.22■□□□□ 0.35
CTSB-231ENST00000534382 PLIN4Q96Q06 1357 aa17.22■□□□□ 0.35
CTSB-231ENST00000534382 RAD50Q92878 1312 aa17.21■□□□□ 0.35
CTSB-231ENST00000534382 TSPY2A6NKD2 308 aa17.21■□□□□ 0.35
CTSB-231ENST00000534382 TNPO2O14787 897 aaKnown RBP17.21■□□□□ 0.35
CTSB-231ENST00000534382 WDR46O15213 610 aaKnown RBP17.21■□□□□ 0.35
CTSB-231ENST00000534382 TTLL1O95922 423 aa17.21■□□□□ 0.35
CTSB-231ENST00000534382 HAND2P61296 217 aa17.21■□□□□ 0.35
CTSB-231ENST00000534382 MKL1Q969V6 931 aa17.21■□□□□ 0.35
CTSB-231ENST00000534382 PAGR1Q9BTK6 254 aa17.21■□□□□ 0.35
CTSB-231ENST00000534382 IL25Q9H293 177 aa17.21■□□□□ 0.35
CTSB-231ENST00000534382 RABGAP1Q9Y3P9 1069 aa17.21■□□□□ 0.35
CTSB-231ENST00000534382 GREB1LQ9C091 1923 aaPredicted RBP17.21■□□□□ 0.35
CTSB-231ENST00000534382 ZSWIM8A7E2V4 1837 aa17.21■□□□□ 0.35
CTSB-231ENST00000534382 MYPNQ86TC9 1320 aa17.21■□□□□ 0.34
CTSB-231ENST00000534382 SPDYE16A6NNV3 312 aaPredicted RBP17.2■□□□□ 0.34
CTSB-231ENST00000534382 ZNF213O14771 459 aa17.2■□□□□ 0.34
CTSB-231ENST00000534382 RAD21O60216 631 aa17.2■□□□□ 0.34
CTSB-231ENST00000534382 RANBP6O60518 1105 aaKnown RBP17.2■□□□□ 0.34
CTSB-231ENST00000534382 PEX10O60683 326 aa17.2■□□□□ 0.34
CTSB-231ENST00000534382 PCP11498 1178 aaKnown RBP17.2■□□□□ 0.34
CTSB-231ENST00000534382 ERVK-9P63128 1117 aa17.2■□□□□ 0.34
CTSB-231ENST00000534382 ERVK-24P63145 666 aa17.2■□□□□ 0.34
CTSB-231ENST00000534382 Q3C1V9 767 aa17.2■□□□□ 0.34
CTSB-231ENST00000534382 AKNAD1Q5T1N1 836 aa17.2■□□□□ 0.34
CTSB-231ENST00000534382 SKAP1Q86WV1 359 aa17.2■□□□□ 0.34
CTSB-231ENST00000534382 STAG1Q8WVM7 1258 aa17.2■□□□□ 0.34
CTSB-231ENST00000534382 COA7Q96BR5 231 aa17.2■□□□□ 0.34
CTSB-231ENST00000534382 TOMM22Q9NS69 142 aa17.2■□□□□ 0.34
CTSB-231ENST00000534382 CTNNA3Q9UI47 895 aa17.2■□□□□ 0.34
CTSB-231ENST00000534382 SYNPO2Q9UMS6 1093 aa17.2■□□□□ 0.34
CTSB-231ENST00000534382 F5H6K3 240 aa17.19■□□□□ 0.34
CTSB-231ENST00000534382 CNMDO75829 334 aa17.19■□□□□ 0.34
CTSB-231ENST00000534382 FLOT1O75955 427 aa17.19■□□□□ 0.34
CTSB-231ENST00000534382 PRKCZQ05513 592 aa17.19■□□□□ 0.34
CTSB-231ENST00000534382 KLRC3Q07444 240 aa17.19■□□□□ 0.34
CTSB-231ENST00000534382 PPP4R3BQ5MIZ7 849 aa17.19■□□□□ 0.34
CTSB-231ENST00000534382 MFSD6Q6ZSS7 791 aa17.19■□□□□ 0.34
CTSB-231ENST00000534382 NBPF11Q86T75 865 aa17.19■□□□□ 0.34
CTSB-231ENST00000534382 RAET1EQ8TD07 263 aa17.19■□□□□ 0.34
CTSB-231ENST00000534382 NBPF3Q9H094 633 aa17.19■□□□□ 0.34
CTSB-231ENST00000534382 RNF41Q9H4P4 317 aaPredicted RBP17.19■□□□□ 0.34
CTSB-231ENST00000534382 GABRQQ9UN88 632 aa17.19■□□□□ 0.34
CTSB-231ENST00000534382 DSG3P32926 999 aa17.18■□□□□ 0.34
CTSB-231ENST00000534382 FLT3LGP49771 235 aa17.18■□□□□ 0.34
CTSB-231ENST00000534382 SLC9C1Q4G0N8 1177 aa17.18■□□□□ 0.34
CTSB-231ENST00000534382 RRP12Q5JTH9 1297 aaKnown RBP17.18■□□□□ 0.34
CTSB-231ENST00000534382 ERICH6BQ5W0A0 696 aa17.18■□□□□ 0.34
CTSB-231ENST00000534382 TBC1D10CQ8IV04 446 aa17.18■□□□□ 0.34
CTSB-231ENST00000534382 ARMC5Q96C12 935 aa17.18■□□□□ 0.34
CTSB-231ENST00000534382 IL17RBQ9NRM6 502 aa17.18■□□□□ 0.34
CTSB-231ENST00000534382 BTBD7Q9P203 1132 aa17.18■□□□□ 0.34
CTSB-231ENST00000534382 SGSM2O43147 1006 aa17.17■□□□□ 0.34
CTSB-231ENST00000534382 NDUFB10O96000 172 aa17.17■□□□□ 0.34
CTSB-231ENST00000534382 MAPK4P31152 587 aa17.17■□□□□ 0.34
CTSB-231ENST00000534382 CCNA1P78396 465 aa17.17■□□□□ 0.34
CTSB-231ENST00000534382 IMMTQ16891 758 aaKnown RBP17.17■□□□□ 0.34
CTSB-231ENST00000534382 BMP2KLQ5H9B9 411 aa17.17■□□□□ 0.34
CTSB-231ENST00000534382 FAM83BQ5T0W9 1011 aa17.17■□□□□ 0.34
CTSB-231ENST00000534382 CCAR1Q8IX12 1150 aaKnown RBP17.17■□□□□ 0.34
CTSB-231ENST00000534382 LRRC47Q8N1G4 583 aaKnown RBP17.17■□□□□ 0.34
CTSB-231ENST00000534382 MB21D1Q8N884 522 aa17.17■□□□□ 0.34
CTSB-231ENST00000534382 PORCNQ9H237 461 aa17.17■□□□□ 0.34
CTSB-231ENST00000534382 MGAMO43451 1857 aa17.16■□□□□ 0.34
CTSB-231ENST00000534382 NMT2O60551 498 aa17.16■□□□□ 0.34
CTSB-231ENST00000534382 GRK4P32298 578 aa17.16■□□□□ 0.34
CTSB-231ENST00000534382 NOVP48745 357 aa17.16■□□□□ 0.34
CTSB-231ENST00000534382 IRF5Q13568 498 aa17.16■□□□□ 0.34
CTSB-231ENST00000534382 GMCL1P1Q8NEA9 526 aa17.16■□□□□ 0.34
CTSB-231ENST00000534382 SH3TC2Q8TF17 1288 aa17.16■□□□□ 0.34
CTSB-231ENST00000534382 ATG4CQ96DT6 458 aa17.16■□□□□ 0.34
CTSB-231ENST00000534382 NUP88Q99567 741 aaPredicted RBP17.16■□□□□ 0.34
CTSB-231ENST00000534382 TCP11L1Q9NUJ3 509 aa17.16■□□□□ 0.34
CTSB-231ENST00000534382 GJD2Q9UKL4 321 aa17.16■□□□□ 0.34
CTSB-231ENST00000534382 STX8Q9UNK0 236 aa17.16■□□□□ 0.34
CTSB-231ENST00000534382 NT5C2P49902 561 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms