RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 CAPNS2Q96L46 248 aa13.86□□□□□ -0.19
CTSC-209ENST00000534131 ZKSCAN3Q9BRR0 538 aa13.86□□□□□ -0.19
CTSC-209ENST00000534131 KAT14Q9H8E8 782 aa13.86□□□□□ -0.19
CTSC-209ENST00000534131 SYNPO2Q9UMS6 1093 aa13.86□□□□□ -0.19
CTSC-209ENST00000534131 TNKSO95271 1327 aa13.86□□□□□ -0.19
CTSC-209ENST00000534131 WDR33Q9C0J8 1336 aaKnown RBP13.86□□□□□ -0.19
CTSC-209ENST00000534131 IGKV6D-41A0A0C4DH26 115 aa13.85□□□□□ -0.19
CTSC-209ENST00000534131 IRF6O14896 467 aa13.85□□□□□ -0.19
CTSC-209ENST00000534131 RBM25P49756 843 aaKnown RBP13.85□□□□□ -0.19
CTSC-209ENST00000534131 BACE1P56817 501 aa13.85□□□□□ -0.19
CTSC-209ENST00000534131 JAG1P78504 1218 aa13.85□□□□□ -0.19
CTSC-209ENST00000534131 SREBF2Q12772 1141 aa13.85□□□□□ -0.19
CTSC-209ENST00000534131 MKRN3Q13064 507 aaKnown RBP13.85□□□□□ -0.19
CTSC-209ENST00000534131 PABPC4Q13310 644 aaKnown RBP eCLIP13.85□□□□□ -0.19
CTSC-209ENST00000534131 ADCK5Q3MIX3 580 aa13.85□□□□□ -0.19
CTSC-209ENST00000534131 CYP4F22Q6NT55 531 aa13.85□□□□□ -0.19
CTSC-209ENST00000534131 SYNE3Q6ZMZ3 975 aa13.85□□□□□ -0.19
CTSC-209ENST00000534131 NFXL1Q6ZNB6 911 aa13.85□□□□□ -0.19
CTSC-209ENST00000534131 GADL1Q6ZQY3 521 aa13.85□□□□□ -0.19
CTSC-209ENST00000534131 RUFY3Q7L099 469 aa13.85□□□□□ -0.19
CTSC-209ENST00000534131 CYB5R4Q7L1T6 521 aa13.85□□□□□ -0.19
CTSC-209ENST00000534131 MKL1Q969V6 931 aa13.85□□□□□ -0.19
CTSC-209ENST00000534131 KCNH4Q9UQ05 1017 aa13.85□□□□□ -0.19
CTSC-209ENST00000534131 TAF6LQ9Y6J9 622 aa13.85□□□□□ -0.19
CTSC-209ENST00000534131 CCDC69A6NI79 296 aa13.84□□□□□ -0.19
CTSC-209ENST00000534131 RPS6KB1P23443 525 aa13.84□□□□□ -0.19
CTSC-209ENST00000534131 MTMR2Q13614 643 aa13.84□□□□□ -0.19
CTSC-209ENST00000534131 ZYXQ15942 572 aaKnown RBP13.84□□□□□ -0.19
CTSC-209ENST00000534131 SHROOM1Q2M3G4 852 aaPredicted RBP13.84□□□□□ -0.19
CTSC-209ENST00000534131 CHST3Q7LGC8 479 aa13.84□□□□□ -0.19
CTSC-209ENST00000534131 CCDC84Q86UT8 332 aaPredicted RBP13.84□□□□□ -0.19
CTSC-209ENST00000534131 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.84□□□□□ -0.19
CTSC-209ENST00000534131 KIAA1683Q9H0B3 1180 aa13.84□□□□□ -0.19
CTSC-209ENST00000534131 ZSWIM6Q9HCJ5 1215 aa13.84□□□□□ -0.19
CTSC-209ENST00000534131 IL17RBQ9NRM6 502 aa13.84□□□□□ -0.19
CTSC-209ENST00000534131 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.84□□□□□ -0.19
CTSC-209ENST00000534131 TMX2Q9Y320 296 aa13.84□□□□□ -0.19
CTSC-209ENST00000534131 LOC285556D6RIA3 1793 aa13.83□□□□□ -0.19
CTSC-209ENST00000534131 CCL15-CCL14A0A0B4J2E2 113 aa13.83□□□□□ -0.2
CTSC-209ENST00000534131 FOXN1O15353 648 aa13.83□□□□□ -0.2
CTSC-209ENST00000534131 NMT2O60551 498 aa13.83□□□□□ -0.2
CTSC-209ENST00000534131 MAP2K2P36507 400 aa13.83□□□□□ -0.2
CTSC-209ENST00000534131 HMGCS2P54868 508 aa13.83□□□□□ -0.2
CTSC-209ENST00000534131 ANKRD1Q15327 319 aa13.83□□□□□ -0.2
CTSC-209ENST00000534131 CCL15Q16663 113 aa13.83□□□□□ -0.2
CTSC-209ENST00000534131 SH3D19Q5HYK7 790 aa13.83□□□□□ -0.2
CTSC-209ENST00000534131 CATIPQ7Z7H3 387 aa13.83□□□□□ -0.2
CTSC-209ENST00000534131 PROCA1Q8NCQ7 364 aaPredicted RBP13.83□□□□□ -0.2
CTSC-209ENST00000534131 LPAR1Q92633 364 aa13.83□□□□□ -0.2
CTSC-209ENST00000534131 TMEM47Q9BQJ4 181 aa13.83□□□□□ -0.2
CTSC-209ENST00000534131 VCPKMTQ9H867 229 aa13.83□□□□□ -0.2
CTSC-209ENST00000534131 PDRG1Q9NUG6 133 aa13.83□□□□□ -0.2
CTSC-209ENST00000534131 ISY1Q9ULR0 285 aaKnown RBP13.83□□□□□ -0.2
CTSC-209ENST00000534131 MYH6P13533 1939 aa13.82□□□□□ -0.2
CTSC-209ENST00000534131 A0A0G2JLL6 359 aaPredicted RBP13.82□□□□□ -0.2
CTSC-209ENST00000534131 LIFRP42702 1097 aa13.82□□□□□ -0.2
CTSC-209ENST00000534131 ANTXR2P58335 489 aa13.82□□□□□ -0.2
CTSC-209ENST00000534131 EXOSC10Q01780 885 aaKnown RBP13.82□□□□□ -0.2
CTSC-209ENST00000534131 SLFN13Q68D06 897 aa13.82□□□□□ -0.2
CTSC-209ENST00000534131 PRRT2Q7Z6L0 340 aaPredicted RBP13.82□□□□□ -0.2
CTSC-209ENST00000534131 CLEC10AQ8IUN9 316 aa13.82□□□□□ -0.2
CTSC-209ENST00000534131 ENAHQ8N8S7 591 aaPredicted RBP13.82□□□□□ -0.2
CTSC-209ENST00000534131 ACER1Q8TDN7 264 aa13.82□□□□□ -0.2
CTSC-209ENST00000534131 ANKS1AQ92625 1134 aa13.82□□□□□ -0.2
CTSC-209ENST00000534131 TBC1D32Q96NH3 1257 aa13.82□□□□□ -0.2
CTSC-209ENST00000534131 A0A1W2PRG0 241 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 FAM155AB1AL88 458 aaPredicted RBP13.81□□□□□ -0.2
CTSC-209ENST00000534131 F5H6K3 240 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 SH2B2O14492 632 aaPredicted RBP13.81□□□□□ -0.2
CTSC-209ENST00000534131 CALM1P0DP23 149 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 CALM2P0DP24 149 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 CALM3P0DP25 149 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 GJA5P36382 358 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 NOVP48745 357 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 NEK4P51957 841 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 KIF23Q02241 960 aaPredicted RBP13.81□□□□□ -0.2
CTSC-209ENST00000534131 KLRC3Q07444 240 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 RABEP1Q15276 862 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 SEC23AQ15436 765 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 Q6ZUG5 572 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 LRRC47Q8N1G4 583 aaKnown RBP13.81□□□□□ -0.2
CTSC-209ENST00000534131 PNMA1Q8ND90 353 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 GMCL1P1Q8NEA9 526 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 IGDCC4Q8TDY8 1250 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 IL17RAQ96F46 866 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 C12orf42Q96LP6 360 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 WBP1LQ9NX94 342 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 PNMA3Q9UL41 463 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 NAP1L2Q9ULW6 460 aaPredicted RBP13.81□□□□□ -0.2
CTSC-209ENST00000534131 MTMR7Q9Y216 660 aa13.81□□□□□ -0.2
CTSC-209ENST00000534131 WDR46O15213 610 aaKnown RBP13.8□□□□□ -0.2
CTSC-209ENST00000534131 ST18O60284 1047 aa13.8□□□□□ -0.2
CTSC-209ENST00000534131 ALDH1A1P00352 501 aa13.8□□□□□ -0.2
CTSC-209ENST00000534131 CPA1P15085 419 aa13.8□□□□□ -0.2
CTSC-209ENST00000534131 OSBPP22059 807 aa13.8□□□□□ -0.2
CTSC-209ENST00000534131 SLC1A4P43007 532 aa13.8□□□□□ -0.2
CTSC-209ENST00000534131 MAP2K1Q02750 393 aaPredicted RBP13.8□□□□□ -0.2
CTSC-209ENST00000534131 RCSD1Q6JBY9 416 aa13.8□□□□□ -0.2
CTSC-209ENST00000534131 SIAH1Q8IUQ4 282 aa13.8□□□□□ -0.2
CTSC-209ENST00000534131 TNS4Q8IZW8 715 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms