RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 PDE2AO00408 941 aaPredicted RBP4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 ZBTB39O15060 712 aa4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 TRPA1O75762 1119 aa4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 LMNB1P20700 586 aa4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 RFC4P35249 363 aa4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 USP11P51784 963 aa4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 DNM1Q05193 864 aaKnown RBP4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 C19orf57Q0VDD7 668 aa4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 GRM1Q13255 1194 aa4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 SGO2Q562F6 1265 aa4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 HSP90AB2PQ58FF8 381 aa4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 RAPGEF4Q8WZA2 1011 aa4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 EDEM1Q92611 657 aa4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 SMARCC1Q92922 1105 aaPredicted RBP4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 USP26Q9BXU7 913 aa4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 CYP4F12Q9HCS2 524 aa4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 CNTN3Q9P232 1028 aa4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 TRPM1Q7Z4N2 1603 aa4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 CNTNAP1P78357 1384 aa4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 SBNO2Q9Y2G9 1366 aa4.23□□□□□ -1.73
CHMP4A-208ENST00000534106 PIK3C2AO00443 1686 aa4.22□□□□□ -1.73
CHMP4A-208ENST00000534106 AKAP12Q02952 1782 aa4.22□□□□□ -1.73
CHMP4A-208ENST00000534106 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.22□□□□□ -1.73
CHMP4A-208ENST00000534106 NFKBIEO00221 500 aa4.22□□□□□ -1.73
CHMP4A-208ENST00000534106 ACPPP15309 386 aa4.22□□□□□ -1.73
CHMP4A-208ENST00000534106 TM4SF1P30408 202 aa4.22□□□□□ -1.73
CHMP4A-208ENST00000534106 HOXA10P31260 410 aaPredicted RBP4.22□□□□□ -1.73
CHMP4A-208ENST00000534106 FZD5Q13467 585 aa4.22□□□□□ -1.73
CHMP4A-208ENST00000534106 AAMPQ13685 434 aa4.22□□□□□ -1.73
CHMP4A-208ENST00000534106 IKBKEQ14164 716 aa4.22□□□□□ -1.73
CHMP4A-208ENST00000534106 DEFB115Q30KQ5 88 aa4.22□□□□□ -1.73
CHMP4A-208ENST00000534106 PAOXQ6QHF9 649 aa4.22□□□□□ -1.73
CHMP4A-208ENST00000534106 ATCAYQ86WG3 371 aa4.22□□□□□ -1.73
CHMP4A-208ENST00000534106 TP53INP2Q8IXH6 220 aa4.22□□□□□ -1.73
CHMP4A-208ENST00000534106 C1orf127Q8N9H9 656 aa4.22□□□□□ -1.73
CHMP4A-208ENST00000534106 PMEPA1Q969W9 287 aa4.22□□□□□ -1.73
CHMP4A-208ENST00000534106 SALL4Q9UJQ4 1053 aa4.22□□□□□ -1.73
CHMP4A-208ENST00000534106 PASKQ96RG2 1323 aa4.21□□□□□ -1.73
CHMP4A-208ENST00000534106 WDR33Q9C0J8 1336 aaKnown RBP4.21□□□□□ -1.73
CHMP4A-208ENST00000534106 C10orf71Q711Q0 1435 aa4.21□□□□□ -1.73
CHMP4A-208ENST00000534106 NSD3Q9BZ95 1437 aa4.21□□□□□ -1.73
CHMP4A-208ENST00000534106 FAM95CA0A1B0GW59 222 aa4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 TMEM88BA6NKF7 163 aa4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 POLRMTO00411 1230 aaKnown RBP4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 TM4SF5O14894 197 aa4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 AOC2O75106 756 aa4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 RPS6KA4O75676 772 aa4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 F13BP05160 661 aa4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 SOX10P56693 466 aa4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 EAPPQ56P03 285 aaPredicted RBP4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 TMEM164Q5U3C3 297 aa4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 MAP1SQ66K74 1059 aaPredicted RBP4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 C2CD5Q86YS7 1000 aa4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 ASAP3Q8TDY4 903 aa4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 YIPF2Q9BWQ6 316 aa4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 MCOLN1Q9GZU1 580 aa4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 DZANK1Q9NVP4 752 aa4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 TMOD3Q9NYL9 352 aa4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 ADGRE2Q9UHX3 823 aa4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 PLEKHG2Q9H7P9 1386 aa4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 CICQ96RK0 1608 aaPredicted RBP4.21□□□□□ -1.74
CHMP4A-208ENST00000534106 RAB3GAP2Q9H2M9 1393 aa4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 MEGF11A6BM72 1044 aa4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 A6NHS1 94 aa4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 CYP26A1O43174 497 aa4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 NOM1Q5C9Z4 860 aaKnown RBP4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 USPL1Q5W0Q7 1092 aa4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 HGSNATQ68CP4 663 aa4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 CYP4F22Q6NT55 531 aa4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 HDGFL2Q7Z4V5 671 aaPredicted RBP4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 ABI1Q8IZP0 508 aa4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 TTLL6Q8N841 843 aa4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 COG3Q96JB2 828 aa4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 TBC1D32Q96NH3 1257 aa4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 OSMRQ99650 979 aa4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 METTL22Q9BUU2 404 aaPredicted RBP4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 GGNBP2Q9H3C7 697 aa4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 TAF1DQ9H5J8 278 aaPredicted RBP4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 WNK3Q9BYP7 1800 aa4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 PCDH11XQ9BZA7 1347 aa4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 PCDH11YQ9BZA8 1340 aa4.2□□□□□ -1.74
CHMP4A-208ENST00000534106 N4BP2Q86UW6 1770 aaPredicted RBP4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 CD163L1Q9NR16 1453 aa4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 ITSN1Q15811 1721 aa4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 QSER1Q2KHR3 1735 aa4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 KRTAP4-8A0A0G2JLE6 195 aa4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 SOX1O00570 391 aaPredicted RBP4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 PPM1GO15355 546 aaPredicted RBP4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 ATG7O95352 703 aa4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 FOSL1P15407 271 aa4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 ATP2B4P23634 1241 aa4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 CRKLP46109 303 aaKnown RBP4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 MAP2K1Q02750 393 aaPredicted RBP4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 GSTM4Q03013 218 aa4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 NFIXQ14938 502 aa4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 EXOSC6Q5RKV6 272 aaKnown RBP4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 OLFM4Q6UX06 510 aa4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 XKR5Q6UX68 686 aa4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 CNTROBQ8N137 903 aa4.19□□□□□ -1.74
CHMP4A-208ENST00000534106 TMEM102Q8N9M5 508 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms