RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 TRIM47Q96LD4 638 aa15.87■□□□□ 0.13
CAPN1-227ENST00000533909 VCPKMTQ9H867 229 aa15.87■□□□□ 0.13
CAPN1-227ENST00000533909 ZMYM6O95789 1325 aa15.87■□□□□ 0.13
CAPN1-227ENST00000533909 HAND2P61296 217 aa15.86■□□□□ 0.13
CAPN1-227ENST00000533909 FAM47AQ5JRC9 791 aa15.86■□□□□ 0.13
CAPN1-227ENST00000533909 RRP12Q5JTH9 1297 aaKnown RBP15.86■□□□□ 0.13
CAPN1-227ENST00000533909 SAMD1Q6SPF0 538 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-227ENST00000533909 CATSPERGQ6ZRH7 1159 aa15.86■□□□□ 0.13
CAPN1-227ENST00000533909 GPRC5AQ8NFJ5 357 aa15.86■□□□□ 0.13
CAPN1-227ENST00000533909 RAET1EQ8TD07 263 aa15.86■□□□□ 0.13
CAPN1-227ENST00000533909 RNF41Q9H4P4 317 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-227ENST00000533909 CLIP2Q9UDT6 1046 aa15.86■□□□□ 0.13
CAPN1-227ENST00000533909 CTNNA3Q9UI47 895 aa15.86■□□□□ 0.13
CAPN1-227ENST00000533909 ANAPC4Q9UJX5 808 aa15.86■□□□□ 0.13
CAPN1-227ENST00000533909 ISY1Q9ULR0 285 aaKnown RBP15.86■□□□□ 0.13
CAPN1-227ENST00000533909 ZNF213O14771 459 aa15.85■□□□□ 0.13
CAPN1-227ENST00000533909 TTLL1O95922 423 aa15.85■□□□□ 0.13
CAPN1-227ENST00000533909 SLC9C1Q4G0N8 1177 aa15.85■□□□□ 0.13
CAPN1-227ENST00000533909 MFSD6Q6ZSS7 791 aa15.85■□□□□ 0.13
CAPN1-227ENST00000533909 NBPF11Q86T75 865 aa15.85■□□□□ 0.13
CAPN1-227ENST00000533909 NEDD1Q8NHV4 660 aa15.85■□□□□ 0.13
CAPN1-227ENST00000533909 CEP95Q96GE4 821 aa15.85■□□□□ 0.13
CAPN1-227ENST00000533909 HOXC10Q9NYD6 342 aa15.85■□□□□ 0.13
CAPN1-227ENST00000533909 NYAP2Q9P242 653 aa15.85■□□□□ 0.13
CAPN1-227ENST00000533909 SRRDQ9UH36 339 aa15.85■□□□□ 0.13
CAPN1-227ENST00000533909 MYPNQ86TC9 1320 aa15.85■□□□□ 0.13
CAPN1-227ENST00000533909 RAD50Q92878 1312 aa15.85■□□□□ 0.13
CAPN1-227ENST00000533909 WDR46O15213 610 aaKnown RBP15.84■□□□□ 0.13
CAPN1-227ENST00000533909 FLOT1O75955 427 aa15.84■□□□□ 0.13
CAPN1-227ENST00000533909 CHMLP26374 656 aa15.84■□□□□ 0.13
CAPN1-227ENST00000533909 CCNA1P78396 465 aa15.84■□□□□ 0.13
CAPN1-227ENST00000533909 COG2Q14746 738 aa15.84■□□□□ 0.13
CAPN1-227ENST00000533909 IMMTQ16891 758 aaKnown RBP15.84■□□□□ 0.13
CAPN1-227ENST00000533909 SIAH1Q8IUQ4 282 aa15.84■□□□□ 0.13
CAPN1-227ENST00000533909 DSCC1Q9BVC3 393 aa15.84■□□□□ 0.13
CAPN1-227ENST00000533909 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.84■□□□□ 0.13
CAPN1-227ENST00000533909 MORF4L1Q9UBU8 362 aa15.84■□□□□ 0.13
CAPN1-227ENST00000533909 STX8Q9UNK0 236 aa15.84■□□□□ 0.13
CAPN1-227ENST00000533909 PTCH2Q9Y6C5 1203 aa15.84■□□□□ 0.13
CAPN1-227ENST00000533909 ORC4O43929 436 aa15.83■□□□□ 0.12
CAPN1-227ENST00000533909 PCP11498 1178 aaKnown RBP15.83■□□□□ 0.12
CAPN1-227ENST00000533909 ERVK-9P63128 1117 aa15.83■□□□□ 0.12
CAPN1-227ENST00000533909 ERVK-24P63145 666 aa15.83■□□□□ 0.12
CAPN1-227ENST00000533909 WDR78Q5VTH9 848 aa15.83■□□□□ 0.12
CAPN1-227ENST00000533909 INCENPQ9NQS7 918 aa15.83■□□□□ 0.12
CAPN1-227ENST00000533909 MTMR4Q9NYA4 1195 aa15.83■□□□□ 0.12
CAPN1-227ENST00000533909 BIN2Q9UBW5 565 aaPredicted RBP15.83■□□□□ 0.12
CAPN1-227ENST00000533909 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.83■□□□□ 0.12
CAPN1-227ENST00000533909 RABGAP1Q9Y3P9 1069 aa15.83■□□□□ 0.12
CAPN1-227ENST00000533909 CTGFP29279 349 aa15.82■□□□□ 0.12
CAPN1-227ENST00000533909 MAPK4P31152 587 aa15.82■□□□□ 0.12
CAPN1-227ENST00000533909 CAP1Q01518 475 aa15.82■□□□□ 0.12
CAPN1-227ENST00000533909 PRKCZQ05513 592 aa15.82■□□□□ 0.12
CAPN1-227ENST00000533909 AKNAD1Q5T1N1 836 aa15.82■□□□□ 0.12
CAPN1-227ENST00000533909 CASC1Q6TDU7 716 aa15.82■□□□□ 0.12
CAPN1-227ENST00000533909 KIAA1211Q6ZU35 1233 aa15.82■□□□□ 0.12
CAPN1-227ENST00000533909 LRRC47Q8N1G4 583 aaKnown RBP15.82■□□□□ 0.12
CAPN1-227ENST00000533909 RBPJLQ9UBG7 517 aa15.82■□□□□ 0.12
CAPN1-227ENST00000533909 PLIN4Q96Q06 1357 aa15.82■□□□□ 0.12
CAPN1-227ENST00000533909 IGKV6D-41A0A0C4DH26 115 aa15.81■□□□□ 0.12
CAPN1-227ENST00000533909 SPDYE16A6NNV3 312 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-227ENST00000533909 F5H6K3 240 aa15.81■□□□□ 0.12
CAPN1-227ENST00000533909 KLRC3Q07444 240 aa15.81■□□□□ 0.12
CAPN1-227ENST00000533909 PLS1Q14651 629 aa15.81■□□□□ 0.12
CAPN1-227ENST00000533909 KIAA1755Q5JYT7 1200 aa15.81■□□□□ 0.12
CAPN1-227ENST00000533909 FAM83BQ5T0W9 1011 aa15.81■□□□□ 0.12
CAPN1-227ENST00000533909 MB21D1Q8N884 522 aa15.81■□□□□ 0.12
CAPN1-227ENST00000533909 STAG1Q8WVM7 1258 aa15.81■□□□□ 0.12
CAPN1-227ENST00000533909 ESR2Q92731 530 aa15.81■□□□□ 0.12
CAPN1-227ENST00000533909 TXNRD2Q9NNW7 524 aa15.81■□□□□ 0.12
CAPN1-227ENST00000533909 SYNPO2Q9UMS6 1093 aa15.81■□□□□ 0.12
CAPN1-227ENST00000533909 CTDP1Q9Y5B0 961 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-227ENST00000533909 ZSWIM8A7E2V4 1837 aa15.8■□□□□ 0.12
CAPN1-227ENST00000533909 PEX10O60683 326 aa15.8■□□□□ 0.12
CAPN1-227ENST00000533909 NDUFB10O96000 172 aa15.8■□□□□ 0.12
CAPN1-227ENST00000533909 FLT3LGP49771 235 aa15.8■□□□□ 0.12
CAPN1-227ENST00000533909 BMP2KLQ5H9B9 411 aa15.8■□□□□ 0.12
CAPN1-227ENST00000533909 ERICH6BQ5W0A0 696 aa15.8■□□□□ 0.12
CAPN1-227ENST00000533909 LBX2Q6XYB7 198 aa15.8■□□□□ 0.12
CAPN1-227ENST00000533909 MKL1Q969V6 931 aa15.8■□□□□ 0.12
CAPN1-227ENST00000533909 PPP4R2Q9NY27 417 aa15.8■□□□□ 0.12
CAPN1-227ENST00000533909 GREB1LQ9C091 1923 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-227ENST00000533909 SGSM2O43147 1006 aa15.79■□□□□ 0.12
CAPN1-227ENST00000533909 MYCP01106 439 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-227ENST00000533909 FGRP09769 529 aa15.79■□□□□ 0.12
CAPN1-227ENST00000533909 GRK4P32298 578 aa15.79■□□□□ 0.12
CAPN1-227ENST00000533909 DSG3P32926 999 aa15.79■□□□□ 0.12
CAPN1-227ENST00000533909 NT5C2P49902 561 aa15.79■□□□□ 0.12
CAPN1-227ENST00000533909 SOX10P56693 466 aa15.79■□□□□ 0.12
CAPN1-227ENST00000533909 IKQ13123 557 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-227ENST00000533909 SLFN13Q68D06 897 aa15.79■□□□□ 0.12
CAPN1-227ENST00000533909 SKAP1Q86WV1 359 aa15.79■□□□□ 0.12
CAPN1-227ENST00000533909 TBC1D10CQ8IV04 446 aa15.79■□□□□ 0.12
CAPN1-227ENST00000533909 SLAIN1Q8ND83 568 aa15.79■□□□□ 0.12
CAPN1-227ENST00000533909 GMCL1P1Q8NEA9 526 aa15.79■□□□□ 0.12
CAPN1-227ENST00000533909 SH3TC2Q8TF17 1288 aa15.79■□□□□ 0.12
CAPN1-227ENST00000533909 NUP88Q99567 741 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-227ENST00000533909 SLF1Q9BQI6 1058 aa15.79■□□□□ 0.12
CAPN1-227ENST00000533909 TMEM106CQ9BVX2 250 aa15.79■□□□□ 0.12
CAPN1-227ENST00000533909 IVNS1ABPQ9Y6Y0 642 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms