RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ZNF579Q8NAF0 562 aaKnown RBP21.91■■□□□ 1.1
CAPN1-226ENST00000533820 EEF2KMTQ96G04 330 aa21.91■■□□□ 1.1
CAPN1-226ENST00000533820 ACSBG1Q96GR2 724 aa21.91■■□□□ 1.1
CAPN1-226ENST00000533820 LCMT1Q9UIC8 334 aa21.91■■□□□ 1.1
CAPN1-226ENST00000533820 XBP1P17861 261 aa21.9■■□□□ 1.1
CAPN1-226ENST00000533820 MCM7P33993 719 aa21.9■■□□□ 1.1
CAPN1-226ENST00000533820 MCM6Q14566 821 aa21.9■■□□□ 1.1
CAPN1-226ENST00000533820 RRAGBQ5VZM2 374 aa21.9■■□□□ 1.1
CAPN1-226ENST00000533820 ZNF34Q8IZ26 560 aa21.9■■□□□ 1.1
CAPN1-226ENST00000533820 TMTC2Q8N394 836 aa21.9■■□□□ 1.1
CAPN1-226ENST00000533820 GOLGA1Q92805 767 aa21.9■■□□□ 1.1
CAPN1-226ENST00000533820 JAG2Q9Y219 1238 aa21.9■■□□□ 1.1
CAPN1-226ENST00000533820 N4BP3O15049 544 aa21.9■■□□□ 1.1
CAPN1-226ENST00000533820 RHOXF2BP0C7M4 288 aa21.9■■□□□ 1.1
CAPN1-226ENST00000533820 TRIML1Q8N9V2 468 aa21.9■■□□□ 1.1
CAPN1-226ENST00000533820 RHOXF2Q9BQY4 288 aa21.9■■□□□ 1.1
CAPN1-226ENST00000533820 TAB2Q9NYJ8 693 aa21.9■■□□□ 1.1
CAPN1-226ENST00000533820 GNAT2P19087 354 aa21.89■■□□□ 1.1
CAPN1-226ENST00000533820 ERCC5P28715 1186 aaPredicted RBP21.89■■□□□ 1.1
CAPN1-226ENST00000533820 CHMP4BP1P59074 171 aa21.89■■□□□ 1.1
CAPN1-226ENST00000533820 FAM47AQ5JRC9 791 aa21.89■■□□□ 1.1
CAPN1-226ENST00000533820 WWC2Q6AWC2 1192 aa21.89■■□□□ 1.1
CAPN1-226ENST00000533820 PIK3AP1Q6ZUJ8 805 aa21.89■■□□□ 1.1
CAPN1-226ENST00000533820 MYCBPQ99417 103 aaPredicted RBP21.89■■□□□ 1.1
CAPN1-226ENST00000533820 SUGCTQ9HAC7 445 aa21.89■■□□□ 1.1
CAPN1-226ENST00000533820 ADD3Q9UEY8 706 aaKnown RBP21.89■■□□□ 1.1
CAPN1-226ENST00000533820 RNF225M0QZC1 329 aaPredicted RBP21.89■■□□□ 1.09
CAPN1-226ENST00000533820 KIF5CO60282 957 aa21.89■■□□□ 1.09
CAPN1-226ENST00000533820 SEC23AQ15436 765 aa21.89■■□□□ 1.09
CAPN1-226ENST00000533820 RSRC2Q7L4I2 434 aaKnown RBP21.89■■□□□ 1.09
CAPN1-226ENST00000533820 CATIPQ7Z7H3 387 aa21.89■■□□□ 1.09
CAPN1-226ENST00000533820 ZSCAN10Q96SZ4 725 aaPredicted RBP21.89■■□□□ 1.09
CAPN1-226ENST00000533820 PLEKHG2Q9H7P9 1386 aa21.88■■□□□ 1.09
CAPN1-226ENST00000533820 TPM1P09493 284 aa21.88■■□□□ 1.09
CAPN1-226ENST00000533820 CUL4BQ13620 913 aa21.88■■□□□ 1.09
CAPN1-226ENST00000533820 ICE2Q659A1 982 aa21.88■■□□□ 1.09
CAPN1-226ENST00000533820 AATFQ9NY61 560 aaKnown RBP eCLIP21.88■■□□□ 1.096e-6■■■■■ 54.7
CAPN1-226ENST00000533820 NIP7Q9Y221 180 aaKnown RBP eCLIP21.88■■□□□ 1.09
CAPN1-226ENST00000533820 TOGARAM1Q9Y4F4 1720 aa21.88■■□□□ 1.09
CAPN1-226ENST00000533820 FILIP1LQ4L180 1135 aa21.88■■□□□ 1.09
CAPN1-226ENST00000533820 TTC38Q5R3I4 469 aa21.88■■□□□ 1.09
CAPN1-226ENST00000533820 SPATA20Q8TB22 786 aa21.88■■□□□ 1.09
CAPN1-226ENST00000533820 DRC1Q96MC2 740 aa21.88■■□□□ 1.09
CAPN1-226ENST00000533820 PLIN2Q99541 437 aa21.88■■□□□ 1.09
CAPN1-226ENST00000533820 RNF26Q9BY78 433 aaPredicted RBP21.88■■□□□ 1.09
CAPN1-226ENST00000533820 PPP1R3GB7ZBB8 358 aa21.88■■□□□ 1.09
CAPN1-226ENST00000533820 GYPCP04921 128 aa21.88■■□□□ 1.09
CAPN1-226ENST00000533820 NUP88Q99567 741 aaPredicted RBP21.88■■□□□ 1.09
CAPN1-226ENST00000533820 SLC35F6Q8N357 371 aa21.87■■□□□ 1.09
CAPN1-226ENST00000533820 ZNF622Q969S3 477 aaKnown RBP eCLIP21.87■■□□□ 1.097e-7■■■□□ 15.2
CAPN1-226ENST00000533820 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.87■■□□□ 1.09
CAPN1-226ENST00000533820 MFAP3LO75121 409 aa21.87■■□□□ 1.09
CAPN1-226ENST00000533820 LONRF2Q1L5Z9 754 aa21.87■■□□□ 1.09
CAPN1-226ENST00000533820 PHF20Q9BVI0 1012 aa21.87■■□□□ 1.09
CAPN1-226ENST00000533820 PNPLA7Q6ZV29 1317 aa21.86■■□□□ 1.09
CAPN1-226ENST00000533820 RABGGTAQ92696 567 aa21.86■■□□□ 1.09
CAPN1-226ENST00000533820 PANX2Q96RD6 677 aa21.86■■□□□ 1.09
CAPN1-226ENST00000533820 SLF1Q9BQI6 1058 aa21.86■■□□□ 1.09
CAPN1-226ENST00000533820 USP17L12C9JPN9 530 aa21.86■■□□□ 1.09
CAPN1-226ENST00000533820 USP17L21D6R901 530 aa21.86■■□□□ 1.09
CAPN1-226ENST00000533820 CCDC152Q4G0S7 254 aa21.86■■□□□ 1.09
CAPN1-226ENST00000533820 TFR2Q9UP52 801 aa21.86■■□□□ 1.09
CAPN1-226ENST00000533820 DCCP43146 1447 aa21.86■■□□□ 1.09
CAPN1-226ENST00000533820 TXLNAP40222 546 aa21.86■■□□□ 1.09
CAPN1-226ENST00000533820 KRT31Q15323 416 aa21.86■■□□□ 1.09
CAPN1-226ENST00000533820 FUT8Q9BYC5 575 aa21.86■■□□□ 1.09
CAPN1-226ENST00000533820 CHD4Q14839 1912 aa21.85■■□□□ 1.09
CAPN1-226ENST00000533820 MYH2Q9UKX2 1941 aa21.85■■□□□ 1.09
CAPN1-226ENST00000533820 XDHP47989 1333 aa21.85■■□□□ 1.09
CAPN1-226ENST00000533820 MYO1CO00159 1063 aa21.85■■□□□ 1.09
CAPN1-226ENST00000533820 IL6STP40189 918 aaPredicted RBP21.85■■□□□ 1.09
CAPN1-226ENST00000533820 NLRP5P59047 1200 aa21.85■■□□□ 1.09
CAPN1-226ENST00000533820 SMIM5Q71RC9 77 aa21.85■■□□□ 1.09
CAPN1-226ENST00000533820 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.85■■□□□ 1.09
CAPN1-226ENST00000533820 ELOA2Q8IYF1 753 aaPredicted RBP21.85■■□□□ 1.09
CAPN1-226ENST00000533820 GDAQ9Y2T3 454 aa21.85■■□□□ 1.09
CAPN1-226ENST00000533820 PAPPAQ13219 1627 aa21.85■■□□□ 1.09
CAPN1-226ENST00000533820 BICDL1Q6ZP65 573 aa21.85■■□□□ 1.09
CAPN1-226ENST00000533820 IQCA1Q86XH1 822 aa21.85■■□□□ 1.09
CAPN1-226ENST00000533820 RASGRP4Q8TDF6 673 aa21.85■■□□□ 1.09
CAPN1-226ENST00000533820 PNKPQ96T60 521 aa21.85■■□□□ 1.09
CAPN1-226ENST00000533820 NCAPGQ9BPX3 1015 aa21.85■■□□□ 1.09
CAPN1-226ENST00000533820 TRIM10Q9UDY6 481 aa21.85■■□□□ 1.09
CAPN1-226ENST00000533820 RASSF8Q8NHQ8 419 aa21.84■■□□□ 1.09
CAPN1-226ENST00000533820 BRMS1Q9HCU9 246 aa21.84■■□□□ 1.09
CAPN1-226ENST00000533820 ERVV-1B6SEH8 477 aa21.84■■□□□ 1.09
CAPN1-226ENST00000533820 H3BQF6 201 aa21.84■■□□□ 1.09
CAPN1-226ENST00000533820 FUT2Q10981 343 aa21.84■■□□□ 1.09
CAPN1-226ENST00000533820 CDKAL1Q5VV42 579 aa21.84■■□□□ 1.09
CAPN1-226ENST00000533820 MYH3P11055 1940 aa21.84■■□□□ 1.09
CAPN1-226ENST00000533820 ATP6V1AP38606 617 aa21.83■■□□□ 1.09
CAPN1-226ENST00000533820 ERVK-24P63145 666 aa21.83■■□□□ 1.09
CAPN1-226ENST00000533820 SRGAP1Q7Z6B7 1085 aa21.83■■□□□ 1.09
CAPN1-226ENST00000533820 SRBD1Q8N5C6 995 aaKnown RBP21.83■■□□□ 1.09
CAPN1-226ENST00000533820 RTL9Q8NET4 1388 aa21.83■■□□□ 1.09
CAPN1-226ENST00000533820 EXOC5O00471 708 aa21.83■■□□□ 1.09
CAPN1-226ENST00000533820 MTRQ99707 1265 aa21.83■■□□□ 1.09
CAPN1-226ENST00000533820 TRIM49BA6NDI0 452 aa21.83■■□□□ 1.08
CAPN1-226ENST00000533820 CYP2D6P10635 497 aa21.83■■□□□ 1.08
CAPN1-226ENST00000533820 TROAPQ12815 778 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms