RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 DNM1Q05193 864 aaKnown RBP9.52□□□□□ -0.89
CASP4-212ENST00000533730 ANKRD18AQ8IVF6 992 aa9.52□□□□□ -0.89
CASP4-212ENST00000533730 SP8Q8IXZ3 490 aa9.52□□□□□ -0.89
CASP4-212ENST00000533730 FTSJ3Q8IY81 847 aaKnown RBP9.52□□□□□ -0.89
CASP4-212ENST00000533730 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.52□□□□□ -0.89
CASP4-212ENST00000533730 SUPT20HQ8NEM7 779 aa9.52□□□□□ -0.89
CASP4-212ENST00000533730 EDEM1Q92611 657 aa9.52□□□□□ -0.89
CASP4-212ENST00000533730 PSMD1Q99460 953 aa9.52□□□□□ -0.89
CASP4-212ENST00000533730 TAOK3Q9H2K8 898 aa9.52□□□□□ -0.89
CASP4-212ENST00000533730 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.52□□□□□ -0.89
CASP4-212ENST00000533730 MYH3P11055 1940 aa9.52□□□□□ -0.89
CASP4-212ENST00000533730 CACNA1SQ13698 1873 aa9.51□□□□□ -0.89
CASP4-212ENST00000533730 NFKBIEO00221 500 aa9.51□□□□□ -0.89
CASP4-212ENST00000533730 GNAI3P08754 354 aa9.51□□□□□ -0.89
CASP4-212ENST00000533730 UBTFL1P0CB47 393 aaPredicted RBP9.51□□□□□ -0.89
CASP4-212ENST00000533730 YY1P25490 414 aa9.51□□□□□ -0.89
CASP4-212ENST00000533730 GNASQ5JWF2 1037 aa9.51□□□□□ -0.89
CASP4-212ENST00000533730 DZIP1LQ8IYY4 767 aaKnown RBP9.51□□□□□ -0.89
CASP4-212ENST00000533730 USP44Q9H0E7 712 aa9.51□□□□□ -0.89
CASP4-212ENST00000533730 VPS33BQ9H267 617 aa9.51□□□□□ -0.89
CASP4-212ENST00000533730 CUEDC1Q9NWM3 386 aaPredicted RBP9.51□□□□□ -0.89
CASP4-212ENST00000533730 NXF1Q9UBU9 619 aaKnown RBP9.51□□□□□ -0.89
CASP4-212ENST00000533730 ANKRD18BA2A2Z9 1011 aa9.5□□□□□ -0.89
CASP4-212ENST00000533730 NBPF7P0C2Y1 421 aaPredicted RBP9.5□□□□□ -0.89
CASP4-212ENST00000533730 ITGA6P23229 1130 aa9.5□□□□□ -0.89
CASP4-212ENST00000533730 MZF1P28698 734 aaPredicted RBP9.5□□□□□ -0.89
CASP4-212ENST00000533730 DNAJA1P31689 397 aaKnown RBP9.5□□□□□ -0.89
CASP4-212ENST00000533730 IGHMBP2P38935 993 aaKnown RBP9.5□□□□□ -0.89
CASP4-212ENST00000533730 PHKA2P46019 1235 aa9.5□□□□□ -0.89
CASP4-212ENST00000533730 FOXO4P98177 505 aa9.5□□□□□ -0.89
CASP4-212ENST00000533730 IFIT5Q13325 482 aaKnown RBP9.5□□□□□ -0.89
CASP4-212ENST00000533730 GNL2Q13823 731 aaKnown RBP9.5□□□□□ -0.89
CASP4-212ENST00000533730 CCDC57Q2TAC2 916 aa9.5□□□□□ -0.89
CASP4-212ENST00000533730 LMBR1LQ6UX01 489 aa9.5□□□□□ -0.89
CASP4-212ENST00000533730 ETFBKMTQ8IXQ9 262 aa9.5□□□□□ -0.89
CASP4-212ENST00000533730 CCDC155Q8N6L0 562 aa9.5□□□□□ -0.89
CASP4-212ENST00000533730 ZDHHC1Q8WTX9 485 aa9.5□□□□□ -0.89
CASP4-212ENST00000533730 CELF1Q92879 486 aaKnown RBP9.5□□□□□ -0.89
CASP4-212ENST00000533730 SUCLG2Q96I99 432 aa9.5□□□□□ -0.89
CASP4-212ENST00000533730 NIFKQ9BYG3 293 aaKnown RBP9.5□□□□□ -0.89
CASP4-212ENST00000533730 GREM2Q9H772 168 aa9.5□□□□□ -0.89
CASP4-212ENST00000533730 SEC31BQ9NQW1 1179 aa9.5□□□□□ -0.89
CASP4-212ENST00000533730 BSDC1Q9NW68 430 aaPredicted RBP9.5□□□□□ -0.89
CASP4-212ENST00000533730 RNF181Q9P0P0 153 aa9.5□□□□□ -0.89
CASP4-212ENST00000533730 DYRK1BQ9Y463 629 aa9.5□□□□□ -0.89
CASP4-212ENST00000533730 FER1L6Q2WGJ9 1857 aa9.5□□□□□ -0.89
CASP4-212ENST00000533730 SNED1Q8TER0 1413 aa9.49□□□□□ -0.89
CASP4-212ENST00000533730 LRRC37AA6NMS7 1700 aa9.49□□□□□ -0.89
CASP4-212ENST00000533730 ANKRD62A6NC57 917 aa9.49□□□□□ -0.89
CASP4-212ENST00000533730 PPFIA3O75145 1194 aa9.49□□□□□ -0.89
CASP4-212ENST00000533730 PDGFAP04085 211 aa9.49□□□□□ -0.89
CASP4-212ENST00000533730 CTSHP09668 335 aa9.49□□□□□ -0.89
CASP4-212ENST00000533730 NCLP19338 710 aaKnown RBP9.49□□□□□ -0.89
CASP4-212ENST00000533730 RASSF7Q02833 373 aa9.49□□□□□ -0.89
CASP4-212ENST00000533730 RABL6Q3YEC7 729 aaPredicted RBP9.49□□□□□ -0.89
CASP4-212ENST00000533730 SH3PXD2AQ5TCZ1 1133 aa9.49□□□□□ -0.89
CASP4-212ENST00000533730 DPP8Q6V1X1 898 aaPredicted RBP9.49□□□□□ -0.89
CASP4-212ENST00000533730 NOP9Q86U38 636 aaKnown RBP9.49□□□□□ -0.89
CASP4-212ENST00000533730 NPAS3Q8IXF0 933 aa9.49□□□□□ -0.89
CASP4-212ENST00000533730 CRELD1Q96HD1 420 aa9.49□□□□□ -0.89
CASP4-212ENST00000533730 CSRNP1Q96S65 589 aa9.49□□□□□ -0.89
CASP4-212ENST00000533730 MPHOSPH8Q99549 860 aa9.49□□□□□ -0.89
CASP4-212ENST00000533730 RTFDC1Q9BY42 306 aaPredicted RBP9.49□□□□□ -0.89
CASP4-212ENST00000533730 CHMP3Q9Y3E7 222 aa9.49□□□□□ -0.89
CASP4-212ENST00000533730 USP5P45974 858 aa9.48□□□□□ -0.89
CASP4-212ENST00000533730 ORC1Q13415 861 aa9.48□□□□□ -0.89
CASP4-212ENST00000533730 TEAD4Q15561 434 aa9.48□□□□□ -0.89
CASP4-212ENST00000533730 CCDC144BQ3MJ40 725 aa9.48□□□□□ -0.89
CASP4-212ENST00000533730 ZNF394Q53GI3 561 aa9.48□□□□□ -0.89
CASP4-212ENST00000533730 TAF7LQ5H9L4 462 aa9.48□□□□□ -0.89
CASP4-212ENST00000533730 EPHA10Q5JZY3 1008 aa9.48□□□□□ -0.89
CASP4-212ENST00000533730 OLFM4Q6UX06 510 aa9.48□□□□□ -0.89
CASP4-212ENST00000533730 TMEM57Q8N5G2 664 aa9.48□□□□□ -0.89
CASP4-212ENST00000533730 ZNF775Q96BV0 537 aaPredicted RBP9.48□□□□□ -0.89
CASP4-212ENST00000533730 EYA3Q99504 573 aa9.48□□□□□ -0.89
CASP4-212ENST00000533730 CHMP4BQ9H444 224 aaKnown RBP9.48□□□□□ -0.89
CASP4-212ENST00000533730 BICC1Q9H694 974 aaKnown RBP9.48□□□□□ -0.89
CASP4-212ENST00000533730 TIMMDC1Q9NPL8 285 aa9.48□□□□□ -0.89
CASP4-212ENST00000533730 EML1O00423 815 aa9.47□□□□□ -0.89
CASP4-212ENST00000533730 TERTO14746 1132 aaKnown RBP9.47□□□□□ -0.89
CASP4-212ENST00000533730 IARSP41252 1262 aaKnown RBP9.47□□□□□ -0.89
CASP4-212ENST00000533730 ZAP70P43403 619 aa9.47□□□□□ -0.89
CASP4-212ENST00000533730 DGKZQ13574 1117 aa9.47□□□□□ -0.89
CASP4-212ENST00000533730 PDE3AQ14432 1141 aa9.47□□□□□ -0.89
CASP4-212ENST00000533730 ITPRIPQ8IWB1 547 aa9.47□□□□□ -0.89
CASP4-212ENST00000533730 FBF1Q8TES7 1133 aa9.47□□□□□ -0.89
CASP4-212ENST00000533730 JDP2Q8WYK2 163 aa9.47□□□□□ -0.89
CASP4-212ENST00000533730 KAZALD1Q96I82 304 aa9.47□□□□□ -0.89
CASP4-212ENST00000533730 GMLQ99445 158 aa9.47□□□□□ -0.89
CASP4-212ENST00000533730 MEIS3Q99687 375 aa9.47□□□□□ -0.89
CASP4-212ENST00000533730 ANKRD2Q9GZV1 360 aa9.47□□□□□ -0.89
CASP4-212ENST00000533730 ANKIB1Q9P2G1 1089 aa9.47□□□□□ -0.89
CASP4-212ENST00000533730 NSFL1CQ9UNZ2 370 aaKnown RBP9.47□□□□□ -0.89
CASP4-212ENST00000533730 PCDHGB7Q9Y5F8 929 aa9.47□□□□□ -0.89
CASP4-212ENST00000533730 AK5Q9Y6K8 562 aa9.47□□□□□ -0.89
CASP4-212ENST00000533730 XDHP47989 1333 aa9.47□□□□□ -0.89
CASP4-212ENST00000533730 SBF1O95248 1867 aa9.47□□□□□ -0.89
CASP4-212ENST00000533730 A0A1B0GTH6 734 aa9.46□□□□□ -0.9
CASP4-212ENST00000533730 H3BM21 787 aa9.46□□□□□ -0.9
CASP4-212ENST00000533730 GNAI2P04899 355 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms