RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 TTC38Q5R3I4 469 aa22.04■■□□□ 1.12
UBXN1-215ENST00000533476 RTFDC1Q9BY42 306 aaPredicted RBP22.04■■□□□ 1.12
UBXN1-215ENST00000533476 TCP11L1Q9NUJ3 509 aa22.04■■□□□ 1.12
UBXN1-215ENST00000533476 CDK5RAP2Q96SN8 1893 aa22.03■■□□□ 1.12
UBXN1-215ENST00000533476 CBFA2T2O43439 604 aa22.03■■□□□ 1.12
UBXN1-215ENST00000533476 PRR29P0C7W0 189 aa22.03■■□□□ 1.12
UBXN1-215ENST00000533476 ATP1A3P13637 1013 aa22.03■■□□□ 1.12
UBXN1-215ENST00000533476 TRAPPC10P48553 1259 aa22.03■■□□□ 1.12
UBXN1-215ENST00000533476 SLC27A3Q5K4L6 730 aa22.03■■□□□ 1.12
UBXN1-215ENST00000533476 USP49Q70CQ1 688 aa22.03■■□□□ 1.12
UBXN1-215ENST00000533476 TMC6Q7Z403 805 aa22.03■■□□□ 1.12
UBXN1-215ENST00000533476 SMARCE1Q969G3 411 aa22.03■■□□□ 1.12
UBXN1-215ENST00000533476 DYNLL2Q96FJ2 89 aa22.03■■□□□ 1.12
UBXN1-215ENST00000533476 CD209Q9NNX6 404 aa22.03■■□□□ 1.12
UBXN1-215ENST00000533476 KCND1Q9NSA2 647 aa22.03■■□□□ 1.12
UBXN1-215ENST00000533476 GGA1Q9UJY5 639 aa22.03■■□□□ 1.12
UBXN1-215ENST00000533476 MORC3Q14149 939 aa22.02■■□□□ 1.12
UBXN1-215ENST00000533476 SLC4A8Q2Y0W8 1093 aa22.02■■□□□ 1.12
UBXN1-215ENST00000533476 MLKLQ8NB16 471 aa22.02■■□□□ 1.12
UBXN1-215ENST00000533476 PNMA1Q8ND90 353 aa22.02■■□□□ 1.12
UBXN1-215ENST00000533476 SPATA20Q8TB22 786 aa22.02■■□□□ 1.12
UBXN1-215ENST00000533476 CCDC34Q96HJ3 373 aa22.02■■□□□ 1.12
UBXN1-215ENST00000533476 C16orf45Q96MC5 204 aaPredicted RBP22.02■■□□□ 1.12
UBXN1-215ENST00000533476 DACH1Q9UI36 760 aa22.02■■□□□ 1.12
UBXN1-215ENST00000533476 WNT7AO00755 349 aa22.02■■□□□ 1.11
UBXN1-215ENST00000533476 NLRP5P59047 1200 aa22.02■■□□□ 1.11
UBXN1-215ENST00000533476 GRM4Q14833 912 aa22.02■■□□□ 1.11
UBXN1-215ENST00000533476 TPD52L1Q16890 204 aaPredicted RBP22.02■■□□□ 1.11
UBXN1-215ENST00000533476 ILDR2Q71H61 639 aa22.02■■□□□ 1.11
UBXN1-215ENST00000533476 TGFBRAP1Q8WUH2 860 aa22.02■■□□□ 1.11
UBXN1-215ENST00000533476 MKNK2Q9HBH9 465 aa22.02■■□□□ 1.11
UBXN1-215ENST00000533476 SH3GLB2Q9NR46 395 aa22.02■■□□□ 1.11
UBXN1-215ENST00000533476 LRRC37AA6NMS7 1700 aa22.02■■□□□ 1.11
UBXN1-215ENST00000533476 BBOX1O75936 387 aa22.01■■□□□ 1.11
UBXN1-215ENST00000533476 CALML3P27482 149 aa22.01■■□□□ 1.11
UBXN1-215ENST00000533476 ATP2C1P98194 919 aaPredicted RBP22.01■■□□□ 1.11
UBXN1-215ENST00000533476 NOM1Q5C9Z4 860 aaKnown RBP22.01■■□□□ 1.11
UBXN1-215ENST00000533476 PDILTQ8N807 584 aa22.01■■□□□ 1.11
UBXN1-215ENST00000533476 PODXL2Q9NZ53 605 aa22.01■■□□□ 1.11
UBXN1-215ENST00000533476 CTIFO43310 598 aaKnown RBP22■■□□□ 1.11
UBXN1-215ENST00000533476 HOXA10P31260 410 aaPredicted RBP22■■□□□ 1.11
UBXN1-215ENST00000533476 GNAQP50148 359 aa22■■□□□ 1.11
UBXN1-215ENST00000533476 KRT27Q7Z3Y8 459 aa22■■□□□ 1.11
UBXN1-215ENST00000533476 LTBP1Q14766 1721 aa22■■□□□ 1.11
UBXN1-215ENST00000533476 GPR75-ASB3A0A0A6YYF3 556 aa22■■□□□ 1.11
UBXN1-215ENST00000533476 RIOK3O14730 519 aaKnown RBP22■■□□□ 1.11
UBXN1-215ENST00000533476 SLFN14P0C7P3 912 aa22■■□□□ 1.11
UBXN1-215ENST00000533476 ZNF174Q15697 407 aa22■■□□□ 1.11
UBXN1-215ENST00000533476 ARMCX5Q6P1M9 558 aa22■■□□□ 1.11
UBXN1-215ENST00000533476 GRAMD1CQ8IYS0 662 aa22■■□□□ 1.11
UBXN1-215ENST00000533476 SYMPKQ92797 1274 aaKnown RBP22■■□□□ 1.11
UBXN1-215ENST00000533476 A0A087X0B3 334 aa21.99■■□□□ 1.11
UBXN1-215ENST00000533476 SERPINC1P01008 464 aa21.99■■□□□ 1.11
UBXN1-215ENST00000533476 TSPY3P0CV98 308 aa21.99■■□□□ 1.11
UBXN1-215ENST00000533476 TSPY8P0CW00 308 aa21.99■■□□□ 1.11
UBXN1-215ENST00000533476 TNNT1P13805 278 aa21.99■■□□□ 1.11
UBXN1-215ENST00000533476 BTDP43251 543 aa21.99■■□□□ 1.11
UBXN1-215ENST00000533476 UBASH3AP57075 661 aa21.99■■□□□ 1.11
UBXN1-215ENST00000533476 SYCP1Q15431 976 aa21.99■■□□□ 1.11
UBXN1-215ENST00000533476 ZNF710Q8N1W2 664 aa21.99■■□□□ 1.11
UBXN1-215ENST00000533476 EPSTI1Q96J88 318 aa21.99■■□□□ 1.11
UBXN1-215ENST00000533476 ZNF287Q9HBT7 754 aa21.99■■□□□ 1.11
UBXN1-215ENST00000533476 FANCLQ9NW38 375 aa21.99■■□□□ 1.11
UBXN1-215ENST00000533476 PLCG2P16885 1265 aa21.98■■□□□ 1.11
UBXN1-215ENST00000533476 SFPQP23246 707 aaKnown RBP eCLIP21.98■■□□□ 1.11
UBXN1-215ENST00000533476 PIK3AP1Q6ZUJ8 805 aa21.98■■□□□ 1.11
UBXN1-215ENST00000533476 SH3RF1Q7Z6J0 888 aa21.98■■□□□ 1.11
UBXN1-215ENST00000533476 MAPKAPK5Q8IW41 473 aa21.98■■□□□ 1.11
UBXN1-215ENST00000533476 ZNF444Q8N0Y2 327 aaPredicted RBP21.98■■□□□ 1.11
UBXN1-215ENST00000533476 DHX58Q96C10 678 aa21.98■■□□□ 1.11
UBXN1-215ENST00000533476 CRAMP1Q96RY5 1269 aa21.98■■□□□ 1.11
UBXN1-215ENST00000533476 PAXBP1Q9Y5B6 917 aa21.98■■□□□ 1.11
UBXN1-215ENST00000533476 USP17L3A6NCW0 530 aa21.98■■□□□ 1.11
UBXN1-215ENST00000533476 USP17L4A6NCW7 530 aa21.98■■□□□ 1.11
UBXN1-215ENST00000533476 RASA1P20936 1047 aa21.98■■□□□ 1.11
UBXN1-215ENST00000533476 KCNJ6P48051 423 aa21.98■■□□□ 1.11
UBXN1-215ENST00000533476 PLCD1P51178 756 aa21.98■■□□□ 1.11
UBXN1-215ENST00000533476 PTGDRQ13258 359 aa21.98■■□□□ 1.11
UBXN1-215ENST00000533476 USP17L1Q7RTZ2 530 aa21.98■■□□□ 1.11
UBXN1-215ENST00000533476 ENOX1Q8TC92 643 aaKnown RBP21.98■■□□□ 1.11
UBXN1-215ENST00000533476 MAD2L2Q9UI95 211 aa21.98■■□□□ 1.11
UBXN1-215ENST00000533476 KLRG2A4D1S0 409 aaPredicted RBP21.97■■□□□ 1.11
UBXN1-215ENST00000533476 VEGFAP15692 232 aaPredicted RBP21.97■■□□□ 1.11
UBXN1-215ENST00000533476 DDR1Q08345 913 aa21.97■■□□□ 1.11
UBXN1-215ENST00000533476 CT47A1Q5JQC4 288 aaPredicted RBP21.97■■□□□ 1.11
UBXN1-215ENST00000533476 NYAP1Q6ZVC0 841 aa21.97■■□□□ 1.11
UBXN1-215ENST00000533476 CCAR2Q8N163 923 aaKnown RBP21.97■■□□□ 1.11
UBXN1-215ENST00000533476 DPF2Q92785 391 aa21.97■■□□□ 1.11
UBXN1-215ENST00000533476 FAM163AQ96GL9 167 aaPredicted RBP21.97■■□□□ 1.11
UBXN1-215ENST00000533476 SNED1Q8TER0 1413 aa21.97■■□□□ 1.11
UBXN1-215ENST00000533476 USP27XA6NNY8 438 aa21.96■■□□□ 1.11
UBXN1-215ENST00000533476 SLF2Q8IX21 1173 aa21.96■■□□□ 1.11
UBXN1-215ENST00000533476 BLIDQ8IZY5 108 aa21.96■■□□□ 1.11
UBXN1-215ENST00000533476 STAG2Q8N3U4 1231 aa21.96■■□□□ 1.11
UBXN1-215ENST00000533476 SLC44A5Q8NCS7 719 aa21.96■■□□□ 1.11
UBXN1-215ENST00000533476 TBC1D16Q8TBP0 767 aa21.96■■□□□ 1.11
UBXN1-215ENST00000533476 TBC1D22AQ8WUA7 517 aa21.96■■□□□ 1.11
UBXN1-215ENST00000533476 CCDC94Q9BW85 323 aaPredicted RBP21.96■■□□□ 1.11
UBXN1-215ENST00000533476 SAP30BPQ9UHR5 308 aaKnown RBP21.96■■□□□ 1.11
UBXN1-215ENST00000533476 POLRMTO00411 1230 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms