RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 USP17L15C9J2P7 530 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 USP17L13C9JLJ4 530 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 USP17L11C9JVI0 530 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 USP17L18D6R9N7 530 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 USP17L22D6RA61 530 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 USP17L17D6RBQ6 530 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 USP17L19D6RCP7 530 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 USP17L20D6RJB6 530 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 SLC27A2O14975 620 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 KDM4AO75164 1064 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 OSBPP22059 807 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 NT5C2P49902 561 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 USP17L24Q0WX57 530 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 C17orf99Q6UX52 265 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 CATSPERGQ6ZRH7 1159 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 SPICE1Q8N0Z3 855 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 LPAR1Q92633 364 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 KRT23Q9C075 422 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 RPAP3Q9H6T3 665 aaPredicted RBP14.16□□□□□ -0.14
SSBP3-214ENST00000533209 CNNM2Q9H8M5 875 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 GOPCQ9HD26 462 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 CPA4Q9UI42 421 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 PNMA3Q9UL41 463 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 SYNPO2Q9UMS6 1093 aa14.16□□□□□ -0.14
SSBP3-214ENST00000533209 E7EWF7 191 aa14.15□□□□□ -0.14
SSBP3-214ENST00000533209 FKTNO75072 461 aa14.15□□□□□ -0.14
SSBP3-214ENST00000533209 BCRP11274 1271 aa14.15□□□□□ -0.14
SSBP3-214ENST00000533209 IRX3P78415 501 aaPredicted RBP14.15□□□□□ -0.14
SSBP3-214ENST00000533209 PPP4R3BQ5MIZ7 849 aa14.15□□□□□ -0.14
SSBP3-214ENST00000533209 CREB3L3Q68CJ9 461 aa14.15□□□□□ -0.14
SSBP3-214ENST00000533209 STOX1Q6ZVD7 989 aa14.15□□□□□ -0.14
SSBP3-214ENST00000533209 LRRC47Q8N1G4 583 aaKnown RBP14.15□□□□□ -0.14
SSBP3-214ENST00000533209 P2RX7Q99572 595 aaKnown RBP14.15□□□□□ -0.14
SSBP3-214ENST00000533209 ZSWIM5Q9P217 1185 aa14.15□□□□□ -0.14
SSBP3-214ENST00000533209 F5H6K3 240 aa14.14□□□□□ -0.15
SSBP3-214ENST00000533209 WDR46O15213 610 aaKnown RBP14.14□□□□□ -0.15
SSBP3-214ENST00000533209 SP3Q02447 781 aa14.14□□□□□ -0.15
SSBP3-214ENST00000533209 KLRC3Q07444 240 aa14.14□□□□□ -0.15
SSBP3-214ENST00000533209 RCSD1Q6JBY9 416 aa14.14□□□□□ -0.15
SSBP3-214ENST00000533209 POTEEQ6S8J3 1075 aa14.14□□□□□ -0.15
SSBP3-214ENST00000533209 CYB5R4Q7L1T6 521 aa14.14□□□□□ -0.15
SSBP3-214ENST00000533209 SMCR8Q8TEV9 937 aaPredicted RBP14.14□□□□□ -0.15
SSBP3-214ENST00000533209 STX8Q9UNK0 236 aa14.14□□□□□ -0.15
SSBP3-214ENST00000533209 GTF3C3Q9Y5Q9 886 aa14.14□□□□□ -0.15
SSBP3-214ENST00000533209 RAD21O60216 631 aa14.13□□□□□ -0.15
SSBP3-214ENST00000533209 NDUFB10O96000 172 aa14.13□□□□□ -0.15
SSBP3-214ENST00000533209 GCLCP48506 637 aaPredicted RBP14.13□□□□□ -0.15
SSBP3-214ENST00000533209 HERVK_113P62684 666 aa14.13□□□□□ -0.15
SSBP3-214ENST00000533209 CAP1Q01518 475 aa14.13□□□□□ -0.15
SSBP3-214ENST00000533209 GMCL1P1Q8NEA9 526 aa14.13□□□□□ -0.15
SSBP3-214ENST00000533209 TTC14Q96N46 770 aa14.13□□□□□ -0.15
SSBP3-214ENST00000533209 NUP88Q99567 741 aaPredicted RBP14.13□□□□□ -0.15
SSBP3-214ENST00000533209 ZKSCAN3Q9BRR0 538 aa14.13□□□□□ -0.15
SSBP3-214ENST00000533209 SPDYE16A6NNV3 312 aaPredicted RBP14.12□□□□□ -0.15
SSBP3-214ENST00000533209 REC8O95072 547 aa14.12□□□□□ -0.15
SSBP3-214ENST00000533209 TRDNQ13061 729 aa14.12□□□□□ -0.15
SSBP3-214ENST00000533209 FAM110CQ1W6H9 321 aa14.12□□□□□ -0.15
SSBP3-214ENST00000533209 CCDC178Q5BJE1 867 aa14.12□□□□□ -0.15
SSBP3-214ENST00000533209 FAM83BQ5T0W9 1011 aa14.12□□□□□ -0.15
SSBP3-214ENST00000533209 COL13A1Q5TAT6 717 aaPredicted RBP14.12□□□□□ -0.15
SSBP3-214ENST00000533209 IQCA1Q86XH1 822 aa14.12□□□□□ -0.15
SSBP3-214ENST00000533209 ANKRD13CQ8N6S4 541 aa14.12□□□□□ -0.15
SSBP3-214ENST00000533209 NCOA7Q8NI08 942 aa14.12□□□□□ -0.15
SSBP3-214ENST00000533209 CD99L2Q8TCZ2 262 aa14.12□□□□□ -0.15
SSBP3-214ENST00000533209 ZSCAN10Q96SZ4 725 aaPredicted RBP14.12□□□□□ -0.15
SSBP3-214ENST00000533209 TMEM47Q9BQJ4 181 aa14.12□□□□□ -0.15
SSBP3-214ENST00000533209 TANGO6Q9C0B7 1094 aa14.12□□□□□ -0.15
SSBP3-214ENST00000533209 PEX10O60683 326 aa14.11□□□□□ -0.15
SSBP3-214ENST00000533209 TOP1P11387 765 aaKnown RBP14.11□□□□□ -0.15
SSBP3-214ENST00000533209 LACTBP83111 547 aaPredicted RBP14.11□□□□□ -0.15
SSBP3-214ENST00000533209 COL9A3Q14050 684 aaPredicted RBP14.11□□□□□ -0.15
SSBP3-214ENST00000533209 COG2Q14746 738 aa14.11□□□□□ -0.15
SSBP3-214ENST00000533209 RNF20Q5VTR2 975 aa14.11□□□□□ -0.15
SSBP3-214ENST00000533209 SLFN13Q68D06 897 aa14.11□□□□□ -0.15
SSBP3-214ENST00000533209 LBX2Q6XYB7 198 aa14.11□□□□□ -0.15
SSBP3-214ENST00000533209 RALYLQ86SE5 291 aaKnown RBP14.11□□□□□ -0.15
SSBP3-214ENST00000533209 DGKHQ86XP1 1220 aa14.11□□□□□ -0.15
SSBP3-214ENST00000533209 MB21D2Q8IYB1 491 aaPredicted RBP14.11□□□□□ -0.15
SSBP3-214ENST00000533209 RASEFQ8IZ41 740 aa14.11□□□□□ -0.15
SSBP3-214ENST00000533209 ENAHQ8N8S7 591 aaPredicted RBP14.11□□□□□ -0.15
SSBP3-214ENST00000533209 ANKS1AQ92625 1134 aa14.11□□□□□ -0.15
SSBP3-214ENST00000533209 ERO1AQ96HE7 468 aa14.11□□□□□ -0.15
SSBP3-214ENST00000533209 GMCL1Q96IK5 515 aa14.11□□□□□ -0.15
SSBP3-214ENST00000533209 TXNRD2Q9NNW7 524 aa14.11□□□□□ -0.15
SSBP3-214ENST00000533209 FBXO28Q9NVF7 368 aa14.11□□□□□ -0.15
SSBP3-214ENST00000533209 RBPJLQ9UBG7 517 aa14.11□□□□□ -0.15
SSBP3-214ENST00000533209 MORF4L1Q9UBU8 362 aa14.11□□□□□ -0.15
SSBP3-214ENST00000533209 TNKSO95271 1327 aa14.11□□□□□ -0.15
SSBP3-214ENST00000533209 EPB41L2O43491 1005 aaKnown RBP14.1□□□□□ -0.15
SSBP3-214ENST00000533209 CNMDO75829 334 aa14.1□□□□□ -0.15
SSBP3-214ENST00000533209 FLOT1O75955 427 aa14.1□□□□□ -0.15
SSBP3-214ENST00000533209 MCCP23508 829 aa14.1□□□□□ -0.15
SSBP3-214ENST00000533209 CTGFP29279 349 aa14.1□□□□□ -0.15
SSBP3-214ENST00000533209 DSG3P32926 999 aa14.1□□□□□ -0.15
SSBP3-214ENST00000533209 ANTXR2P58335 489 aa14.1□□□□□ -0.15
SSBP3-214ENST00000533209 SEC23AQ15436 765 aa14.1□□□□□ -0.15
SSBP3-214ENST00000533209 TSGA10IPQ3SY00 556 aa14.1□□□□□ -0.15
SSBP3-214ENST00000533209 RASGRP2Q7LDG7 609 aa14.1□□□□□ -0.15
SSBP3-214ENST00000533209 GTF3C2Q8WUA4 911 aaPredicted RBP14.1□□□□□ -0.15
SSBP3-214ENST00000533209 KCNB2Q92953 911 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms