RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 USP6NLQ92738 828 aa28.08■■■□□ 2.09
SMPD1-209ENST00000533196 RPTORQ8N122 1335 aa28.08■■■□□ 2.09
SMPD1-209ENST00000533196 SALL3Q9BXA9 1300 aa28.08■■■□□ 2.09
SMPD1-209ENST00000533196 ROBO3Q96MS0 1386 aa28.08■■■□□ 2.09
SMPD1-209ENST00000533196 RGS2P41220 211 aa28.07■■■□□ 2.08
SMPD1-209ENST00000533196 MORN1Q5T089 497 aa28.07■■■□□ 2.08
SMPD1-209ENST00000533196 ANKRD45Q5TZF3 282 aa28.07■■■□□ 2.08
SMPD1-209ENST00000533196 OTUD7AQ8TE49 926 aaPredicted RBP28.07■■■□□ 2.08
SMPD1-209ENST00000533196 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.07■■■□□ 2.08
SMPD1-209ENST00000533196 VCPKMTQ9H867 229 aa28.07■■■□□ 2.08
SMPD1-209ENST00000533196 CWC22Q9HCG8 908 aaKnown RBP28.07■■■□□ 2.08
SMPD1-209ENST00000533196 RLFQ13129 1914 aa28.07■■■□□ 2.08
SMPD1-209ENST00000533196 GREB1LQ9C091 1923 aaPredicted RBP28.06■■■□□ 2.08
SMPD1-209ENST00000533196 SMIM22K7EJ46 135 aa28.06■■■□□ 2.08
SMPD1-209ENST00000533196 TRIB2Q92519 343 aa28.06■■■□□ 2.08
SMPD1-209ENST00000533196 DEFB118Q96PH6 123 aa28.06■■■□□ 2.08
SMPD1-209ENST00000533196 FSD1Q9BTV5 496 aa28.06■■■□□ 2.08
SMPD1-209ENST00000533196 HTATIP2Q9BUP3 242 aa28.06■■■□□ 2.08
SMPD1-209ENST00000533196 TANGO6Q9C0B7 1094 aa28.06■■■□□ 2.08
SMPD1-209ENST00000533196 CRISPLD2Q9H0B8 497 aa28.06■■■□□ 2.08
SMPD1-209ENST00000533196 HMX1Q9NP08 348 aaPredicted RBP28.06■■■□□ 2.08
SMPD1-209ENST00000533196 PATL2C9JE40 543 aaKnown RBP28.05■■■□□ 2.08
SMPD1-209ENST00000533196 WDR46O15213 610 aaKnown RBP28.05■■■□□ 2.08
SMPD1-209ENST00000533196 FARP2O94887 1054 aaPredicted RBP28.05■■■□□ 2.08
SMPD1-209ENST00000533196 MB21D1Q8N884 522 aa28.05■■■□□ 2.08
SMPD1-209ENST00000533196 ZNF287Q9HBT7 754 aa28.05■■■□□ 2.08
SMPD1-209ENST00000533196 BTBD7Q9P203 1132 aa28.05■■■□□ 2.08
SMPD1-209ENST00000533196 CEP290O15078 2479 aa28.04■■■□□ 2.08
SMPD1-209ENST00000533196 A0A0G2JMZ2 1700 aa28.04■■■□□ 2.08
SMPD1-209ENST00000533196 M0R2C6 588 aa28.04■■■□□ 2.08
SMPD1-209ENST00000533196 MAP3K21Q5TCX8 1036 aa28.04■■■□□ 2.08
SMPD1-209ENST00000533196 APBA2Q99767 749 aa28.04■■■□□ 2.08
SMPD1-209ENST00000533196 NACAP1Q9BZK3 213 aa28.04■■■□□ 2.08
SMPD1-209ENST00000533196 SLC15A5A6NIM6 579 aa28.03■■■□□ 2.08
SMPD1-209ENST00000533196 TFRCP02786 760 aaKnown RBP28.03■■■□□ 2.08
SMPD1-209ENST00000533196 EEF2P13639 858 aaKnown RBP28.03■■■□□ 2.08
SMPD1-209ENST00000533196 TDO2P48775 406 aa28.03■■■□□ 2.08
SMPD1-209ENST00000533196 MAP2K5Q13163 448 aa28.03■■■□□ 2.08
SMPD1-209ENST00000533196 CLEC10AQ8IUN9 316 aa28.03■■■□□ 2.08
SMPD1-209ENST00000533196 MKNK2Q9HBH9 465 aa28.03■■■□□ 2.08
SMPD1-209ENST00000533196 EPB41L4AQ9HCS5 686 aaPredicted RBP28.03■■■□□ 2.08
SMPD1-209ENST00000533196 STAP2Q9UGK3 403 aa28.03■■■□□ 2.08
SMPD1-209ENST00000533196 IVNS1ABPQ9Y6Y0 642 aa28.03■■■□□ 2.08
SMPD1-209ENST00000533196 PARP14Q460N5 1801 aa28.03■■■□□ 2.08
SMPD1-209ENST00000533196 MINDY4BA8MYZ0 360 aa28.02■■■□□ 2.08
SMPD1-209ENST00000533196 APPP05067 770 aa28.02■■■□□ 2.08
SMPD1-209ENST00000533196 ZKSCAN1P17029 563 aaPredicted RBP28.02■■■□□ 2.08
SMPD1-209ENST00000533196 PTPREP23469 700 aa28.02■■■□□ 2.08
SMPD1-209ENST00000533196 DSG3P32926 999 aa28.02■■■□□ 2.08
SMPD1-209ENST00000533196 KIAA1755Q5JYT7 1200 aa28.02■■■□□ 2.08
SMPD1-209ENST00000533196 ZMYM1Q5SVZ6 1142 aa28.02■■■□□ 2.08
SMPD1-209ENST00000533196 TICAM2Q86XR7 235 aa28.02■■■□□ 2.08
SMPD1-209ENST00000533196 ANKLE1Q8NAG6 615 aa28.02■■■□□ 2.08
SMPD1-209ENST00000533196 GOPCQ9HD26 462 aa28.02■■■□□ 2.08
SMPD1-209ENST00000533196 SLC34A2O95436 690 aa28.01■■■□□ 2.07
SMPD1-209ENST00000533196 RASA1P20936 1047 aa28.01■■■□□ 2.07
SMPD1-209ENST00000533196 IFNL3Q8IZI9 196 aa28.01■■■□□ 2.07
SMPD1-209ENST00000533196 SHCBP1Q8NEM2 672 aa28.01■■■□□ 2.07
SMPD1-209ENST00000533196 FLOT1O75955 427 aa28■■■□□ 2.07
SMPD1-209ENST00000533196 PRKAR2AP13861 404 aaKnown RBP28■■■□□ 2.07
SMPD1-209ENST00000533196 TRIM32Q13049 653 aa28■■■□□ 2.07
SMPD1-209ENST00000533196 WDR78Q5VTH9 848 aa28■■■□□ 2.07
SMPD1-209ENST00000533196 EVI5LQ96CN4 794 aa28■■■□□ 2.07
SMPD1-209ENST00000533196 STRNO43815 780 aa27.99■■■□□ 2.07
SMPD1-209ENST00000533196 HOXC6P09630 235 aa27.99■■■□□ 2.07
SMPD1-209ENST00000533196 PDE1AP54750 535 aa27.99■■■□□ 2.07
SMPD1-209ENST00000533196 ATP2B2Q01814 1243 aa27.99■■■□□ 2.07
SMPD1-209ENST00000533196 GRB14Q14449 540 aa27.99■■■□□ 2.07
SMPD1-209ENST00000533196 SPICE1Q8N0Z3 855 aa27.99■■■□□ 2.07
SMPD1-209ENST00000533196 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.99■■■□□ 2.07
SMPD1-209ENST00000533196 SPATC1LQ9H0A9 340 aa27.99■■■□□ 2.07
SMPD1-209ENST00000533196 RWDD1Q9H446 243 aaPredicted RBP27.99■■■□□ 2.07
SMPD1-209ENST00000533196 NYAP2Q9P242 653 aa27.99■■■□□ 2.07
SMPD1-209ENST00000533196 ZNF236Q9UL36 1845 aa27.98■■■□□ 2.07
SMPD1-209ENST00000533196 ZNF444Q8N0Y2 327 aaPredicted RBP27.98■■■□□ 2.07
SMPD1-209ENST00000533196 DPF3Q92784 378 aa27.98■■■□□ 2.07
SMPD1-209ENST00000533196 SEC62Q99442 399 aaKnown RBP27.98■■■□□ 2.07
SMPD1-209ENST00000533196 MOV10L1Q9BXT6 1211 aaKnown RBP27.98■■■□□ 2.07
SMPD1-209ENST00000533196 SLC3A2P08195 630 aaKnown RBP27.97■■■□□ 2.07
SMPD1-209ENST00000533196 ADAMTS5Q9UNA0 930 aa27.97■■■□□ 2.07
SMPD1-209ENST00000533196 MYH4Q9Y623 1939 aa27.96■■■□□ 2.07
SMPD1-209ENST00000533196 SMC5Q8IY18 1101 aa27.96■■■□□ 2.07
SMPD1-209ENST00000533196 NAPBQ9H115 298 aa27.96■■■□□ 2.07
SMPD1-209ENST00000533196 MROH8Q9H579 483 aa27.96■■■□□ 2.07
SMPD1-209ENST00000533196 PDE4BQ07343 736 aa27.95■■■□□ 2.06
SMPD1-209ENST00000533196 CACNB2Q08289 660 aaPredicted RBP27.95■■■□□ 2.06
SMPD1-209ENST00000533196 CCL14Q16627 93 aa27.95■■■□□ 2.06
SMPD1-209ENST00000533196 MFSD14CQ5VZR4 134 aa27.95■■■□□ 2.06
SMPD1-209ENST00000533196 ATG4CQ96DT6 458 aa27.95■■■□□ 2.06
SMPD1-209ENST00000533196 OGDHLQ9ULD0 1010 aa27.95■■■□□ 2.06
SMPD1-209ENST00000533196 SYNPO2Q9UMS6 1093 aa27.95■■■□□ 2.06
SMPD1-209ENST00000533196 NECAB2Q7Z6G3 386 aa27.94■■■□□ 2.06
SMPD1-209ENST00000533196 COL11A1P12107 1806 aaPredicted RBP27.94■■■□□ 2.06
SMPD1-209ENST00000533196 IGKV6D-41A0A0C4DH26 115 aa27.93■■■□□ 2.06
SMPD1-209ENST00000533196 SLC25A27O95847 323 aa27.93■■■□□ 2.06
SMPD1-209ENST00000533196 ERCC3P19447 782 aa27.93■■■□□ 2.06
SMPD1-209ENST00000533196 ABRAQ8N0Z2 381 aa27.93■■■□□ 2.06
SMPD1-209ENST00000533196 STK11IPQ8N1F8 1099 aa27.93■■■□□ 2.06
SMPD1-209ENST00000533196 HELLSQ9NRZ9 838 aa27.93■■■□□ 2.06
SMPD1-209ENST00000533196 PPP1R9AQ9ULJ8 1098 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms