RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 ANKRD13AQ8IZ07 590 aa16.46■□□□□ 0.23
HIF3A-215ENST00000533145 GMCL1P1Q8NEA9 526 aa16.46■□□□□ 0.23
HIF3A-215ENST00000533145 ZKSCAN4Q969J2 545 aaPredicted RBP16.46■□□□□ 0.23
HIF3A-215ENST00000533145 LLPHQ9BRT6 129 aaKnown RBP16.46■□□□□ 0.23
HIF3A-215ENST00000533145 FZD1Q9UP38 647 aa16.46■□□□□ 0.23
HIF3A-215ENST00000533145 A0A1W2PRG0 241 aa16.45■□□□□ 0.22
HIF3A-215ENST00000533145 GOLGA8AA7E2F4 631 aa16.45■□□□□ 0.22
HIF3A-215ENST00000533145 STK3Q13188 491 aa16.45■□□□□ 0.22
HIF3A-215ENST00000533145 MICU3Q86XE3 530 aa16.45■□□□□ 0.22
HIF3A-215ENST00000533145 CLEC10AQ8IUN9 316 aa16.45■□□□□ 0.22
HIF3A-215ENST00000533145 NECAB1Q8N987 351 aa16.45■□□□□ 0.22
HIF3A-215ENST00000533145 MYL10Q9BUA6 226 aa16.45■□□□□ 0.22
HIF3A-215ENST00000533145 SH2D4AQ9H788 454 aa16.45■□□□□ 0.22
HIF3A-215ENST00000533145 AS3MTQ9HBK9 375 aa16.45■□□□□ 0.22
HIF3A-215ENST00000533145 PICK1Q9NRD5 415 aa16.45■□□□□ 0.22
HIF3A-215ENST00000533145 RBM28Q9NW13 759 aaKnown RBP16.45■□□□□ 0.22
HIF3A-215ENST00000533145 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.45■□□□□ 0.22
HIF3A-215ENST00000533145 PALM3A6NDB9 673 aaPredicted RBP16.44■□□□□ 0.22
HIF3A-215ENST00000533145 PDHBP11177 359 aa16.44■□□□□ 0.22
HIF3A-215ENST00000533145 CDC27P30260 824 aa16.44■□□□□ 0.22
HIF3A-215ENST00000533145 CCT2P78371 535 aaKnown RBP16.44■□□□□ 0.22
HIF3A-215ENST00000533145 PRKG1Q13976 671 aa16.44■□□□□ 0.22
HIF3A-215ENST00000533145 GRM4Q14833 912 aa16.44■□□□□ 0.22
HIF3A-215ENST00000533145 NTRK3Q16288 839 aa16.44■□□□□ 0.22
HIF3A-215ENST00000533145 RTN1Q16799 776 aa16.44■□□□□ 0.22
HIF3A-215ENST00000533145 CCDC83Q8IWF9 413 aa16.44■□□□□ 0.22
HIF3A-215ENST00000533145 NUP133Q8WUM0 1156 aa16.44■□□□□ 0.22
HIF3A-215ENST00000533145 DAXXQ9UER7 740 aaPredicted RBP16.44■□□□□ 0.22
HIF3A-215ENST00000533145 NAP1L2Q9ULW6 460 aaPredicted RBP16.44■□□□□ 0.22
HIF3A-215ENST00000533145 CSADQ9Y600 493 aa16.44■□□□□ 0.22
HIF3A-215ENST00000533145 SNCAIPQ9Y6H5 919 aa16.44■□□□□ 0.22
HIF3A-215ENST00000533145 F5H6K3 240 aa16.43■□□□□ 0.22
HIF3A-215ENST00000533145 CAPN15O75808 1086 aa16.43■□□□□ 0.22
HIF3A-215ENST00000533145 SMARCA1P28370 1054 aa16.43■□□□□ 0.22
HIF3A-215ENST00000533145 KIF5BP33176 963 aa16.43■□□□□ 0.22
HIF3A-215ENST00000533145 ADD1P35611 737 aaKnown RBP16.43■□□□□ 0.22
HIF3A-215ENST00000533145 SLC4A3P48751 1232 aa16.43■□□□□ 0.22
HIF3A-215ENST00000533145 GNAQP50148 359 aa16.43■□□□□ 0.22
HIF3A-215ENST00000533145 ATP2B2Q01814 1243 aa16.43■□□□□ 0.22
HIF3A-215ENST00000533145 FMR1Q06787 632 aaKnown RBP eCLIP16.43■□□□□ 0.22
HIF3A-215ENST00000533145 KLRC3Q07444 240 aa16.43■□□□□ 0.22
HIF3A-215ENST00000533145 VGLL4Q14135 290 aa16.43■□□□□ 0.22
HIF3A-215ENST00000533145 LRRC47Q8N1G4 583 aaKnown RBP16.43■□□□□ 0.22
HIF3A-215ENST00000533145 CTCFLQ8NI51 663 aaPredicted RBP16.43■□□□□ 0.22
HIF3A-215ENST00000533145 SMARCC2Q8TAQ2 1214 aa16.43■□□□□ 0.22
HIF3A-215ENST00000533145 RBM46Q8TBY0 533 aaKnown RBP16.43■□□□□ 0.22
HIF3A-215ENST00000533145 ACER1Q8TDN7 264 aa16.43■□□□□ 0.22
HIF3A-215ENST00000533145 DCAF4Q8WV16 495 aa16.43■□□□□ 0.22
HIF3A-215ENST00000533145 GMCL1Q96IK5 515 aa16.43■□□□□ 0.22
HIF3A-215ENST00000533145 KIAA1683Q9H0B3 1180 aa16.43■□□□□ 0.22
HIF3A-215ENST00000533145 GBA2Q9HCG7 927 aaPredicted RBP16.43■□□□□ 0.22
HIF3A-215ENST00000533145 MAD2L2Q9UI95 211 aa16.43■□□□□ 0.22
HIF3A-215ENST00000533145 PASKQ96RG2 1323 aa16.43■□□□□ 0.22
HIF3A-215ENST00000533145 C19orf81C9J6K1 198 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 USP17L10C9JJH3 530 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 TOMM70O94826 608 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 CTDNEP1O95476 244 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 IFNAR1P17181 557 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 RXRAP19793 462 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 ECE1P42892 770 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 TTLL12Q14166 644 aaPredicted RBP16.42■□□□□ 0.22
HIF3A-215ENST00000533145 CST9Q5W186 159 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 CPLX2Q6PUV4 134 aaKnown RBP16.42■□□□□ 0.22
HIF3A-215ENST00000533145 MOB2Q70IA6 237 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 ERO1BQ86YB8 467 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 C2orf69Q8N8R5 385 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 ZNF280CQ8ND82 737 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 SMC1BQ8NDV3 1235 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 NSUN7Q8NE18 718 aaKnown RBP16.42■□□□□ 0.22
HIF3A-215ENST00000533145 LZTS2Q9BRK4 669 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 VCPKMTQ9H867 229 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 NCOA5Q9HCD5 579 aaKnown RBP16.42■□□□□ 0.22
HIF3A-215ENST00000533145 CWC22Q9HCG8 908 aaKnown RBP16.42■□□□□ 0.22
HIF3A-215ENST00000533145 GOPCQ9HD26 462 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.42■□□□□ 0.22
HIF3A-215ENST00000533145 AFG3L2Q9Y4W6 797 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 PTPRFP10586 1907 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 MYH6P13533 1939 aa16.42■□□□□ 0.22
HIF3A-215ENST00000533145 CDKL5O76039 1030 aa16.41■□□□□ 0.22
HIF3A-215ENST00000533145 CELF2O95319 508 aaKnown RBP16.41■□□□□ 0.22
HIF3A-215ENST00000533145 PARP1P09874 1014 aaKnown RBP16.41■□□□□ 0.22
HIF3A-215ENST00000533145 USP14P54578 494 aa16.41■□□□□ 0.22
HIF3A-215ENST00000533145 PPATQ06203 517 aa16.41■□□□□ 0.22
HIF3A-215ENST00000533145 ZNF543Q08ER8 600 aa16.41■□□□□ 0.22
HIF3A-215ENST00000533145 FUT2Q10981 343 aa16.41■□□□□ 0.22
HIF3A-215ENST00000533145 ASPRV1Q53RT3 343 aa16.41■□□□□ 0.22
HIF3A-215ENST00000533145 GPATCH4Q5T3I0 446 aaKnown RBP16.41■□□□□ 0.22
HIF3A-215ENST00000533145 SLFN13Q68D06 897 aa16.41■□□□□ 0.22
HIF3A-215ENST00000533145 TMTC3Q6ZXV5 915 aa16.41■□□□□ 0.22
HIF3A-215ENST00000533145 RAB11FIP4Q86YS3 637 aa16.41■□□□□ 0.22
HIF3A-215ENST00000533145 ZHX2Q9Y6X8 837 aa16.41■□□□□ 0.22
HIF3A-215ENST00000533145 SPDYE5A6NIY4 337 aa16.4■□□□□ 0.22
HIF3A-215ENST00000533145 UBE2Q2LH0YL09 131 aa16.4■□□□□ 0.22
HIF3A-215ENST00000533145 CPLX1O14810 134 aa16.4■□□□□ 0.22
HIF3A-215ENST00000533145 NDUFB10O96000 172 aa16.4■□□□□ 0.22
HIF3A-215ENST00000533145 HSP90AA1P07900 732 aaKnown RBP16.4■□□□□ 0.22
HIF3A-215ENST00000533145 BACE1P56817 501 aa16.4■□□□□ 0.22
HIF3A-215ENST00000533145 HMGN5P82970 282 aaKnown RBP16.4■□□□□ 0.22
HIF3A-215ENST00000533145 SH3D19Q5HYK7 790 aa16.4■□□□□ 0.22
HIF3A-215ENST00000533145 USP17L2Q6R6M4 530 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms