RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 TRAIPQ9BWF2 469 aa7.71□□□□□ -1.17
TGFBR3-210ENST00000533089 RASAL2Q9UJF2 1139 aa7.71□□□□□ -1.17
TGFBR3-210ENST00000533089 RTCBQ9Y3I0 505 aaKnown RBP7.71□□□□□ -1.17
TGFBR3-210ENST00000533089 ELP1O95163 1332 aa7.71□□□□□ -1.17
TGFBR3-210ENST00000533089 USP6P35125 1406 aa7.71□□□□□ -1.17
TGFBR3-210ENST00000533089 EFCAB8A8MWE9 144 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 RNMTO43148 476 aaKnown RBP7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 KRT13P13646 458 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 ATP2A2P16615 1042 aaKnown RBP7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 IL13P35225 146 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 IGBP1P78318 339 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 SND1Q7KZF4 910 aaKnown RBP eCLIP7.71□□□□□ -1.186e-8■■■■□ 21.9
TGFBR3-210ENST00000533089 VPS52Q8N1B4 723 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 SNX21Q969T3 373 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 ZC3H12CQ9C0D7 883 aaKnown RBP7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 NYXQ9GZU5 481 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 PLCB1Q9NQ66 1216 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 IFNKQ9P0W0 207 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 LZTS1Q9Y250 596 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 SH3BP5O60239 455 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 OLFML2BQ68BL8 750 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 NEK1Q96PY6 1258 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 MTRQ99707 1265 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 COQ7Q99807 217 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 NUF2Q9BZD4 464 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 JAG2Q9Y219 1238 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 CROCC2H7BZ55 1655 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 RNF40O75150 1001 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 BAG6P46379 1132 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 NAPAP54920 295 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 NDEL1Q9GZM8 345 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 ACTR5Q9H9F9 607 aaPredicted RBP7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 PTCH1Q13635 1447 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 INSRP06213 1382 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 B4DLN1 442 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 STAT6P42226 847 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 GJA8P48165 433 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 ZNF75DP51815 510 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 MRPL12P52815 198 aaKnown RBP7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 MYO1EQ12965 1108 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 CCDC122Q5T0U0 273 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 HIBCHQ6NVY1 386 aaPredicted RBP7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 OSBPL9Q96SU4 736 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 ST7Q9NRC1 585 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 DACT1Q9NYF0 836 aa7.71□□□□□ -1.18
TGFBR3-210ENST00000533089 SASH1O94885 1247 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 AFMP43652 599 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 RARSP54136 660 aaKnown RBP7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 XAGE3Q8WTP9 111 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 C17orf50Q8WW18 174 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 KRT23Q9C075 422 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 CHPF2Q9P2E5 772 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 CCNL1Q9UK58 526 aaPredicted RBP7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 NSFL1CQ9UNZ2 370 aaKnown RBP7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 CCDC159P0C7I6 412 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 CRYMQ14894 314 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 TAOK1Q7L7X3 1001 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 USP37Q86T82 979 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 NFATC2IPQ8NCF5 419 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 THOC1Q96FV9 657 aaKnown RBP7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 ADAM21Q9UKJ8 722 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 KLF18A0A0U1RQI7 1052 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 PRR29P0C7W0 189 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 DZIP3Q86Y13 1208 aaKnown RBP7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 PARP9Q8IXQ6 854 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 FBXO41Q8TF61 875 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 NAPGQ99747 312 aaPredicted RBP7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 CARD10Q9BWT7 1032 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 IMPG2Q9BZV3 1241 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 MAGEB6P1A0A0J9YX57 407 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 ARHGAP24Q8N264 748 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 PYM1Q9BRP8 204 aaKnown RBP7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 QTRT2Q9H974 415 aaKnown RBP7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 GIMAP4Q9NUV9 329 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 TMEM110-MUSTN1A8MSY1 372 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 MAN1A2O60476 641 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 SEC24BO95487 1268 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 ZSCAN22P10073 491 aaPredicted RBP7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 RASSF2P50749 326 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 KIAA0753Q2KHM9 967 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 C16orf87Q6PH81 154 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 ESR2Q92731 530 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 LRRC2Q9BYS8 371 aa7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 ZC3H13Q5T200 1668 aaKnown RBP7.7□□□□□ -1.18
TGFBR3-210ENST00000533089 SPDYE3A6NKU9 549 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 RRAGBQ5VZM2 374 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 SEPT8Q92599 483 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 C6orf50Q9HD87 102 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 KLC4Q9NSK0 619 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 PRR36Q9H6K5 1346 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 CAMSAP1Q5T5Y3 1602 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 PAX3P23760 479 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 LRMPQ12912 555 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 RTN1Q16799 776 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 MYSM1Q5VVJ2 828 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 USP33Q8TEY7 942 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 CACTINQ8WUQ7 758 aaKnown RBP7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 CASP10Q92851 521 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 DYDC2Q96IM9 177 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms