RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 FAM53CQ9NYF3 392 aa10.57□□□□□ -0.72
BDNF-216ENST00000532997 RWDD2AQ9UIY3 292 aa10.57□□□□□ -0.72
BDNF-216ENST00000532997 AKR1B10O60218 316 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 PCP11498 1178 aaKnown RBP10.56□□□□□ -0.72
BDNF-216ENST00000532997 IDEP14735 1019 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 PHKA1P46020 1223 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 PPARAQ07869 468 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 GIGYF2Q6Y7W6 1299 aaKnown RBP10.56□□□□□ -0.72
BDNF-216ENST00000532997 DTHD1Q6ZMT9 781 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 RASGRP2Q7LDG7 609 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 LRRN4CLQ8ND94 238 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 HELBQ8NG08 1087 aaPredicted RBP10.56□□□□□ -0.72
BDNF-216ENST00000532997 FUT8Q9BYC5 575 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 EPC1Q9H2F5 836 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 PIH1D3Q9NQM4 214 aaKnown RBP10.56□□□□□ -0.72
BDNF-216ENST00000532997 KDM6AO15550 1401 aaPredicted RBP10.56□□□□□ -0.72
BDNF-216ENST00000532997 PRR29P0C7W0 189 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 MCM7P33993 719 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 RDXP35241 583 aaKnown RBP10.56□□□□□ -0.72
BDNF-216ENST00000532997 EPS15P42566 896 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 DNM2P50570 870 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 FMR1Q06787 632 aaKnown RBP eCLIP10.56□□□□□ -0.72
BDNF-216ENST00000532997 NR5A1Q13285 461 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 MIGA1Q8NAN2 632 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 IGDCC4Q8TDY8 1250 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 TSG101Q99816 390 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 NEDD4P46934 1319 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 CDHR2Q9BYE9 1310 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 FOXN1O15353 648 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 SCARF1Q14162 830 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 CACNA2D4Q7Z3S7 1137 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 STAG1Q8WVM7 1258 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 CRNKL1Q9BZJ0 848 aaKnown RBP10.56□□□□□ -0.72
BDNF-216ENST00000532997 KAT14Q9H8E8 782 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 TNKSO95271 1327 aa10.56□□□□□ -0.72
BDNF-216ENST00000532997 GOLGA6CA6NDK9 693 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 GOLGA6DP0CG33 693 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 ZNF18P17022 549 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 EEF1GP26641 437 aaKnown RBP10.55□□□□□ -0.72
BDNF-216ENST00000532997 ACRBPQ8NEB7 543 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 TAF4BQ92750 862 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 CALML4Q96GE6 196 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 ZFP91Q96JP5 570 aaPredicted RBP10.55□□□□□ -0.72
BDNF-216ENST00000532997 TANGO6Q9C0B7 1094 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 GREM2Q9H772 168 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 GOLGA6AQ9NYA3 693 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 SPEF2Q9C093 1822 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 GOLGA6BA6NDN3 693 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 ST5P78524 1137 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 SLC20A2Q08357 652 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 TBC1D8BQ0IIM8 1120 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 FAM204AQ9H8W3 233 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 MRPL44Q9H9J2 332 aaKnown RBP10.55□□□□□ -0.72
BDNF-216ENST00000532997 AFDNP55196 1824 aaKnown RBP10.55□□□□□ -0.72
BDNF-216ENST00000532997 TSPY2A6NKD2 308 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 PPFIA1Q13136 1202 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 KRT31Q15323 416 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 DNAJC10Q8IXB1 793 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 MSANTD4Q8NCY6 345 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 SECISBP2LQ93073 1101 aaKnown RBP10.55□□□□□ -0.72
BDNF-216ENST00000532997 RAB34Q9BZG1 259 aa10.55□□□□□ -0.72
BDNF-216ENST00000532997 ADD3Q9UEY8 706 aaKnown RBP10.55□□□□□ -0.72
BDNF-216ENST00000532997 TEX33O43247 280 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 PRPF3O43395 683 aaKnown RBP10.54□□□□□ -0.72
BDNF-216ENST00000532997 DDAH1O94760 285 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 LONP1P36776 959 aaKnown RBP10.54□□□□□ -0.72
BDNF-216ENST00000532997 NT5DC1Q5TFE4 455 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 ZNF658Q5TYW1 1059 aaPredicted RBP10.54□□□□□ -0.72
BDNF-216ENST00000532997 PIK3AP1Q6ZUJ8 805 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 RETREG2Q8NC44 543 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 LRRC27Q9C0I9 530 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 ABHD10Q9NUJ1 306 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 ZNF652Q9Y2D9 606 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 WDR17Q8IZU2 1322 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 NDUFA10O95299 355 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 RPN1P04843 607 aaKnown RBP10.54□□□□□ -0.72
BDNF-216ENST00000532997 VAV2P52735 878 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 PTGDRQ13258 359 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 GBP6Q6ZN66 633 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 DZIP3Q86Y13 1208 aaKnown RBP10.54□□□□□ -0.72
BDNF-216ENST00000532997 BLZF1Q9H2G9 400 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 VIPAS39Q9H9C1 493 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 ZNF287Q9HBT7 754 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 VGLL3A8MV65 326 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 MYL1P05976 194 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 MTF1Q14872 753 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 POTEDQ86YR6 584 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 MICALL1Q8N3F8 863 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 CSGALNACT2Q8N6G5 542 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 TTLL11Q8NHH1 800 aa10.54□□□□□ -0.72
BDNF-216ENST00000532997 ZSCAN10Q96SZ4 725 aaPredicted RBP10.54□□□□□ -0.72
BDNF-216ENST00000532997 BMP2KQ9NSY1 1161 aaPredicted RBP10.54□□□□□ -0.72
BDNF-216ENST00000532997 ACTN4O43707 911 aaKnown RBP10.53□□□□□ -0.72
BDNF-216ENST00000532997 RNF40O75150 1001 aa10.53□□□□□ -0.72
BDNF-216ENST00000532997 MSL3Q8N5Y2 521 aaKnown RBP10.53□□□□□ -0.72
BDNF-216ENST00000532997 TRIM58Q8NG06 486 aa10.53□□□□□ -0.72
BDNF-216ENST00000532997 STAMQ92783 540 aa10.53□□□□□ -0.72
BDNF-216ENST00000532997 LIMA1Q9UHB6 759 aaKnown RBP10.53□□□□□ -0.72
BDNF-216ENST00000532997 PPFIA4O75335 1185 aa10.53□□□□□ -0.72
BDNF-216ENST00000532997 ARID4AP29374 1257 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms