RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 IGSF3O75054 1194 aa9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 TOP1P11387 765 aaKnown RBP9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 VEGFAP15692 232 aaPredicted RBP9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 CD44P16070 742 aaKnown RBP9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 ATP2B1P20020 1258 aa9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 GOLGA8FQ08AF8 430 aa9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 GOLGA8DPQ0D2H9 430 aa9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 NR1I3Q14994 352 aa9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 PTPN21Q16825 1174 aa9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 PFKFB3Q16875 520 aaPredicted RBP9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 FAM47AQ5JRC9 791 aa9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 TTC38Q5R3I4 469 aa9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 TRMT44Q8IYL2 757 aaKnown RBP9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 TC2NQ8N9U0 490 aa9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 ANKS1AQ92625 1134 aa9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 PAGE5Q96GU1 130 aa9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 SETDB2Q96T68 719 aa9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 ARID3AQ99856 593 aa9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 SAMSN1Q9NSI8 373 aaKnown RBP9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 RNF216Q9NWF9 866 aaPredicted RBP9.46□□□□□ -0.89
TRIM53BP-201ENST00000532912 SLU7O95391 586 aaKnown RBP9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 SCG2P13521 617 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 GTF2E1P29083 439 aaPredicted RBP9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 PBX1P40424 430 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 TRAPPC10P48553 1259 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 NT5C2P49902 561 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 IL17AQ16552 155 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 SYT10Q6XYQ8 523 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 SLC51AQ86UW1 340 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 NBPF5PQ86XG9 351 aaPredicted RBP9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 SMAP1Q8IYB5 467 aaPredicted RBP9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 DHX58Q96C10 678 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 CGNQ9P2M7 1197 aaKnown RBP9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 XDHP47989 1333 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 PHLPP2Q6ZVD8 1323 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 DDX60LQ5H9U9 1706 aaKnown RBP9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 VWA3AA6NCI4 1184 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 PPP1R3GB7ZBB8 358 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 M0R2N6 131 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 ARHGAP6O43182 974 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 CCP110O43303 1012 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 NRDCO43847 1150 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 ETF1P62495 437 aaKnown RBP9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 PTGDRQ13258 359 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 ZNF174Q15697 407 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 SLC35G1Q2M3R5 365 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 C12orf60Q5U649 245 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 CDKAL1Q5VV42 579 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 SPECC1LQ69YQ0 1117 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 C4orf32Q8N8J7 132 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 CTCFLQ8NI51 663 aaPredicted RBP9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 FEZ1Q99689 392 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 MTRQ99707 1265 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 BRMS1Q9HCU9 246 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 IL17RBQ9NRM6 502 aa9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 BAZ2BQ9UIF8 2168 aaKnown RBP9.45□□□□□ -0.9
TRIM53BP-201ENST00000532912 NAV1Q8NEY1 1877 aa9.44□□□□□ -0.9
TRIM53BP-201ENST00000532912 CDK5RAP2Q96SN8 1893 aa9.44□□□□□ -0.9
TRIM53BP-201ENST00000532912 GNPATO15228 680 aa9.44□□□□□ -0.9
TRIM53BP-201ENST00000532912 USP17L8P0C7I0 530 aa9.44□□□□□ -0.9
TRIM53BP-201ENST00000532912 CASP1P29466 404 aa9.44□□□□□ -0.9
TRIM53BP-201ENST00000532912 HSP90AA4PQ58FG1 418 aa9.44□□□□□ -0.9
TRIM53BP-201ENST00000532912 SPATA1Q5VX52 437 aa9.44□□□□□ -0.9
TRIM53BP-201ENST00000532912 PDXDC2PQ6P474 469 aa9.44□□□□□ -0.9
TRIM53BP-201ENST00000532912 TPTE2Q6XPS3 522 aa9.44□□□□□ -0.9
TRIM53BP-201ENST00000532912 DGKHQ86XP1 1220 aa9.44□□□□□ -0.9
TRIM53BP-201ENST00000532912 CCDC24Q8N4L8 307 aa9.44□□□□□ -0.9
TRIM53BP-201ENST00000532912 LRRN4CLQ8ND94 238 aa9.44□□□□□ -0.9
TRIM53BP-201ENST00000532912 ARHGEF1Q92888 912 aaKnown RBP9.44□□□□□ -0.9
TRIM53BP-201ENST00000532912 GSDMAQ96QA5 445 aa9.44□□□□□ -0.9
TRIM53BP-201ENST00000532912 FAM205AQ6ZU69 1335 aa9.44□□□□□ -0.9
TRIM53BP-201ENST00000532912 STX10O60499 249 aa9.43□□□□□ -0.9
TRIM53BP-201ENST00000532912 AFMP43652 599 aa9.43□□□□□ -0.9
TRIM53BP-201ENST00000532912 PPP4CP60510 307 aa9.43□□□□□ -0.9
TRIM53BP-201ENST00000532912 GRM4Q14833 912 aa9.43□□□□□ -0.9
TRIM53BP-201ENST00000532912 GRIK5Q16478 980 aa9.43□□□□□ -0.9
TRIM53BP-201ENST00000532912 KMT5BQ4FZB7 885 aa9.43□□□□□ -0.9
TRIM53BP-201ENST00000532912 TYW1BQ6NUM6 668 aa9.43□□□□□ -0.9
TRIM53BP-201ENST00000532912 PIK3AP1Q6ZUJ8 805 aa9.43□□□□□ -0.9
TRIM53BP-201ENST00000532912 C15orf52Q6ZUT6 534 aaKnown RBP9.43□□□□□ -0.9
TRIM53BP-201ENST00000532912 ILDR2Q71H61 639 aa9.43□□□□□ -0.9
TRIM53BP-201ENST00000532912 ZNF397Q8NF99 534 aaPredicted RBP9.43□□□□□ -0.9
TRIM53BP-201ENST00000532912 SH3GLB2Q9NR46 395 aa9.43□□□□□ -0.9
TRIM53BP-201ENST00000532912 TCP11L1Q9NUJ3 509 aa9.43□□□□□ -0.9
TRIM53BP-201ENST00000532912 FAM53CQ9NYF3 392 aa9.43□□□□□ -0.9
TRIM53BP-201ENST00000532912 DDX41Q9UJV9 622 aaKnown RBP9.43□□□□□ -0.9
TRIM53BP-201ENST00000532912 TSPY2A6NKD2 308 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 TEX33O43247 280 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 ZPR1O75312 459 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 ZSCAN20P17040 1043 aaPredicted RBP9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 CBX1P83916 185 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 GRAPQ13588 217 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 ELF2Q15723 593 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 ARL6IP4Q66PJ3 421 aaKnown RBP9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 SPTY2D1Q68D10 685 aaPredicted RBP9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 FBXO38Q6PIJ6 1188 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 STAG2Q8N3U4 1231 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 FNBP4Q8N3X1 1017 aaPredicted RBP9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 DAGLBQ8NCG7 672 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 GRAPLQ8TC17 118 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms