RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 SNCAIPQ9Y6H5 919 aa16.77■□□□□ 0.28
COL16A1-217ENST00000532877 FKBP1BP68106 108 aa16.76■□□□□ 0.27
COL16A1-217ENST00000532877 PRPF38BQ5VTL8 546 aaKnown RBP16.76■□□□□ 0.27
COL16A1-217ENST00000532877 NFXL1Q6ZNB6 911 aa16.76■□□□□ 0.27
COL16A1-217ENST00000532877 CCDC84Q86UT8 332 aaPredicted RBP16.76■□□□□ 0.27
COL16A1-217ENST00000532877 ANKRD13AQ8IZ07 590 aa16.76■□□□□ 0.27
COL16A1-217ENST00000532877 TMTC2Q8N394 836 aa16.76■□□□□ 0.27
COL16A1-217ENST00000532877 SNX21Q969T3 373 aa16.76■□□□□ 0.27
COL16A1-217ENST00000532877 TMEM47Q9BQJ4 181 aa16.76■□□□□ 0.27
COL16A1-217ENST00000532877 PICK1Q9NRD5 415 aa16.76■□□□□ 0.27
COL16A1-217ENST00000532877 NYAP2Q9P242 653 aa16.76■□□□□ 0.27
COL16A1-217ENST00000532877 BRPF3Q9ULD4 1205 aa16.76■□□□□ 0.27
COL16A1-217ENST00000532877 CSADQ9Y600 493 aa16.76■□□□□ 0.27
COL16A1-217ENST00000532877 KLF18A0A0U1RQI7 1052 aa16.75■□□□□ 0.27
COL16A1-217ENST00000532877 CCDC69A6NI79 296 aa16.75■□□□□ 0.27
COL16A1-217ENST00000532877 TOP1P11387 765 aaKnown RBP16.75■□□□□ 0.27
COL16A1-217ENST00000532877 EEF2P13639 858 aaKnown RBP16.75■□□□□ 0.27
COL16A1-217ENST00000532877 PTPRAP18433 802 aa16.75■□□□□ 0.27
COL16A1-217ENST00000532877 ANP32AP39687 249 aaKnown RBP16.75■□□□□ 0.27
COL16A1-217ENST00000532877 MCM2P49736 904 aa16.75■□□□□ 0.27
COL16A1-217ENST00000532877 EVCP57679 992 aa16.75■□□□□ 0.27
COL16A1-217ENST00000532877 ATP2B2Q01814 1243 aa16.75■□□□□ 0.27
COL16A1-217ENST00000532877 LDLRAD1Q5T700 205 aa16.75■□□□□ 0.27
COL16A1-217ENST00000532877 APOA5Q6Q788 366 aa16.75■□□□□ 0.27
COL16A1-217ENST00000532877 SIAH1Q8IUQ4 282 aa16.75■□□□□ 0.27
COL16A1-217ENST00000532877 LRRC47Q8N1G4 583 aaKnown RBP16.75■□□□□ 0.27
COL16A1-217ENST00000532877 KAT14Q9H8E8 782 aa16.75■□□□□ 0.27
COL16A1-217ENST00000532877 CLIP2Q9UDT6 1046 aa16.75■□□□□ 0.27
COL16A1-217ENST00000532877 TPCN1Q9ULQ1 816 aa16.75■□□□□ 0.27
COL16A1-217ENST00000532877 GOLGA8BA8MQT2 603 aa16.74■□□□□ 0.27
COL16A1-217ENST00000532877 USP17L5A8MUK1 530 aa16.74■□□□□ 0.27
COL16A1-217ENST00000532877 UBE2Q2LH0YL09 131 aa16.74■□□□□ 0.27
COL16A1-217ENST00000532877 SOX10P56693 466 aa16.74■□□□□ 0.27
COL16A1-217ENST00000532877 ZNF654Q8IZM8 581 aa16.74■□□□□ 0.27
COL16A1-217ENST00000532877 C2orf69Q8N8R5 385 aa16.74■□□□□ 0.27
COL16A1-217ENST00000532877 PNMA1Q8ND90 353 aa16.74■□□□□ 0.27
COL16A1-217ENST00000532877 CLMNQ96JQ2 1002 aa16.74■□□□□ 0.27
COL16A1-217ENST00000532877 ARHGEF10LQ9HCE6 1279 aa16.74■□□□□ 0.27
COL16A1-217ENST00000532877 LIMCH1Q9UPQ0 1083 aa16.74■□□□□ 0.27
COL16A1-217ENST00000532877 SLC12A7Q9Y666 1083 aa16.74■□□□□ 0.27
COL16A1-217ENST00000532877 A0A1W2PRG0 241 aa16.73■□□□□ 0.27
COL16A1-217ENST00000532877 LARGE1O95461 756 aa16.73■□□□□ 0.27
COL16A1-217ENST00000532877 CATIPQ7Z7H3 387 aa16.73■□□□□ 0.27
COL16A1-217ENST00000532877 HSCBQ8IWL3 235 aa16.73■□□□□ 0.27
COL16A1-217ENST00000532877 ACER1Q8TDN7 264 aa16.73■□□□□ 0.27
COL16A1-217ENST00000532877 MKL1Q969V6 931 aa16.73■□□□□ 0.27
COL16A1-217ENST00000532877 MYL10Q9BUA6 226 aa16.73■□□□□ 0.27
COL16A1-217ENST00000532877 TBC1D2Q9BYX2 928 aa16.73■□□□□ 0.27
COL16A1-217ENST00000532877 ELP3Q9H9T3 547 aa16.73■□□□□ 0.27
COL16A1-217ENST00000532877 NAP1L2Q9ULW6 460 aaPredicted RBP16.73■□□□□ 0.27
COL16A1-217ENST00000532877 UNCXA6NJT0 531 aa16.72■□□□□ 0.27
COL16A1-217ENST00000532877 K7ELQ4 463 aaPredicted RBP16.72■□□□□ 0.27
COL16A1-217ENST00000532877 DDAH1O94760 285 aa16.72■□□□□ 0.27
COL16A1-217ENST00000532877 PDIA3P30101 505 aaKnown RBP16.72■□□□□ 0.27
COL16A1-217ENST00000532877 HUNKP57058 714 aa16.72■□□□□ 0.27
COL16A1-217ENST00000532877 ME3Q16798 604 aa16.72■□□□□ 0.27
COL16A1-217ENST00000532877 MICU3Q86XE3 530 aa16.72■□□□□ 0.27
COL16A1-217ENST00000532877 RAB11FIP4Q86YS3 637 aa16.72■□□□□ 0.27
COL16A1-217ENST00000532877 ZNF274Q96GC6 653 aaPredicted RBP16.72■□□□□ 0.27
COL16A1-217ENST00000532877 AS3MTQ9HBK9 375 aa16.72■□□□□ 0.27
COL16A1-217ENST00000532877 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.72■□□□□ 0.27
COL16A1-217ENST00000532877 SYNPO2Q9UMS6 1093 aa16.72■□□□□ 0.27
COL16A1-217ENST00000532877 HPS5Q9UPZ3 1129 aa16.72■□□□□ 0.27
COL16A1-217ENST00000532877 NID2Q14112 1375 aa16.72■□□□□ 0.27
COL16A1-217ENST00000532877 PTPRFP10586 1907 aa16.72■□□□□ 0.27
COL16A1-217ENST00000532877 SPDYE5A6NIY4 337 aa16.71■□□□□ 0.27
COL16A1-217ENST00000532877 ZBTB43O43298 467 aa16.71■□□□□ 0.27
COL16A1-217ENST00000532877 RXRAP19793 462 aa16.71■□□□□ 0.27
COL16A1-217ENST00000532877 RCAN1P53805 252 aa16.71■□□□□ 0.27
COL16A1-217ENST00000532877 TROAPQ12815 778 aa16.71■□□□□ 0.27
COL16A1-217ENST00000532877 SYNE3Q6ZMZ3 975 aa16.71■□□□□ 0.27
COL16A1-217ENST00000532877 RASGRP2Q7LDG7 609 aa16.71■□□□□ 0.27
COL16A1-217ENST00000532877 ZNF280CQ8ND82 737 aa16.71■□□□□ 0.27
COL16A1-217ENST00000532877 CNKSR2Q8WXI2 1034 aa16.71■□□□□ 0.27
COL16A1-217ENST00000532877 TMX3Q96JJ7 454 aa16.71■□□□□ 0.27
COL16A1-217ENST00000532877 ZSCAN31Q96LW9 406 aaPredicted RBP16.71■□□□□ 0.27
COL16A1-217ENST00000532877 FEZ1Q99689 392 aa16.71■□□□□ 0.27
COL16A1-217ENST00000532877 WDR18Q9BV38 432 aa16.71■□□□□ 0.27
COL16A1-217ENST00000532877 SH2D4AQ9H788 454 aa16.71■□□□□ 0.27
COL16A1-217ENST00000532877 SH2B1Q9NRF2 756 aaPredicted RBP16.71■□□□□ 0.27
COL16A1-217ENST00000532877 TMX2Q9Y320 296 aa16.71■□□□□ 0.27
COL16A1-217ENST00000532877 ZHX2Q9Y6X8 837 aa16.71■□□□□ 0.27
COL16A1-217ENST00000532877 HTTP42858 3142 aa16.71■□□□□ 0.27
COL16A1-217ENST00000532877 METAP2P50579 478 aaKnown RBP eCLIP16.7■□□□□ 0.26
COL16A1-217ENST00000532877 STK3Q13188 491 aa16.7■□□□□ 0.26
COL16A1-217ENST00000532877 RGMBQ6NW40 437 aa16.7■□□□□ 0.26
COL16A1-217ENST00000532877 ERO1BQ86YB8 467 aa16.7■□□□□ 0.26
COL16A1-217ENST00000532877 GMCL1P1Q8NEA9 526 aa16.7■□□□□ 0.26
COL16A1-217ENST00000532877 NUP133Q8WUM0 1156 aa16.7■□□□□ 0.26
COL16A1-217ENST00000532877 RNF186Q9NXI6 227 aa16.7■□□□□ 0.26
COL16A1-217ENST00000532877 MTMR7Q9Y216 660 aa16.7■□□□□ 0.26
COL16A1-217ENST00000532877 AFG3L2Q9Y4W6 797 aa16.7■□□□□ 0.26
COL16A1-217ENST00000532877 TRIM75PA6NK02 468 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 GOLGA8AA7E2F4 631 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 USP17L10C9JJH3 530 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 PFKFB2O60825 505 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 CALM1P0DP23 149 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 CALM2P0DP24 149 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 CALM3P0DP25 149 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 PDHBP11177 359 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms