RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.67	□□□□□ -0.54
PPFIA1-223	ENST00000532793	ANKLE1	Q8NAG6	615 aa		11.67	□□□□□ -0.54
PPFIA1-223	ENST00000532793	RHPN1	Q8TCX5	695 aa		11.67	□□□□□ -0.54
PPFIA1-223	ENST00000532793	KIF1BP	Q96EK5	621 aa		11.67	□□□□□ -0.54
PPFIA1-223	ENST00000532793	DNAJC2	Q99543	621 aa	Known RBP	11.67	□□□□□ -0.54
PPFIA1-223	ENST00000532793	P2RX7	Q99572	595 aa	Known RBP	11.67	□□□□□ -0.54
PPFIA1-223	ENST00000532793	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.67	□□□□□ -0.54
PPFIA1-223	ENST00000532793	NDUFB9	Q9Y6M9	179 aa		11.67	□□□□□ -0.54
PPFIA1-223	ENST00000532793	USP17L15	C9J2P7	530 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	USP17L13	C9JLJ4	530 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	USP17L11	C9JVI0	530 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	USP17L18	D6R9N7	530 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	USP17L22	D6RA61	530 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	USP17L17	D6RBQ6	530 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	USP17L19	D6RCP7	530 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	USP17L20	D6RJB6	530 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	ZKSCAN1	P17029	563 aa	Predicted RBP	11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	RGS2	P41220	211 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	PTPN5	P54829	565 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	ERVK-9	P63128	1117 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	ERVK-24	P63145	666 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	USP17L24	Q0WX57	530 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	SLC9C2	Q5TAH2	1124 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	WDR78	Q5VTH9	848 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	AMOTL1	Q8IY63	956 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	DDRGK1	Q96HY6	314 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	ANTXR1	Q9H6X2	564 aa		11.66	□□□□□ -0.54
PPFIA1-223	ENST00000532793	HTT	P42858	3142 aa		11.65	□□□□□ -0.54
PPFIA1-223	ENST00000532793	ALPK3	Q96L96	1907 aa		11.65	□□□□□ -0.54
PPFIA1-223	ENST00000532793	MPHOSPH10	O00566	681 aa	Known RBP	11.65	□□□□□ -0.54
PPFIA1-223	ENST00000532793	TATDN1	Q6P1N9	297 aa		11.65	□□□□□ -0.54
PPFIA1-223	ENST00000532793	UBE2Q1	Q7Z7E8	422 aa		11.65	□□□□□ -0.54
PPFIA1-223	ENST00000532793	PAWR	Q96IZ0	340 aa	Known RBP	11.65	□□□□□ -0.54
PPFIA1-223	ENST00000532793	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.65	□□□□□ -0.54	5e-6	■■□□□ 11.5
PPFIA1-223	ENST00000532793	CRISPLD2	Q9H0B8	497 aa		11.65	□□□□□ -0.54
PPFIA1-223	ENST00000532793	MCM9	Q9NXL9	1143 aa		11.65	□□□□□ -0.54
PPFIA1-223	ENST00000532793	IVNS1ABP	Q9Y6Y0	642 aa		11.65	□□□□□ -0.54
PPFIA1-223	ENST00000532793	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	GOLIM4	O00461	696 aa		11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	RAB11FIP3	O75154	756 aa		11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	XRCC5	P13010	732 aa	Known RBP	11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	JAG1	P78504	1218 aa		11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	GPR142	Q7Z601	462 aa		11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	PLEKHH3	Q7Z736	793 aa		11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	TRIB2	Q92519	343 aa		11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	SPOCK2	Q92563	424 aa		11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	C12orf42	Q96LP6	360 aa		11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	APBA2	Q99767	749 aa		11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	NBPF3	Q9H094	633 aa		11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	KIAA1683	Q9H0B3	1180 aa		11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	TXNRD2	Q9NNW7	524 aa		11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	EMILIN3	Q9NT22	766 aa		11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	RBM27	Q9P2N5	1060 aa	Known RBP	11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	GJD2	Q9UKL4	321 aa		11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	COG6	Q9Y2V7	657 aa		11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	RABGAP1	Q9Y3P9	1069 aa		11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	FRMPD3	Q5JV73	1810 aa		11.64	□□□□□ -0.55
PPFIA1-223	ENST00000532793	ZNF532	Q9HCE3	1301 aa		11.63	□□□□□ -0.55
PPFIA1-223	ENST00000532793	PDE6A	P16499	860 aa		11.63	□□□□□ -0.55
PPFIA1-223	ENST00000532793	RIOK1	Q9BRS2	568 aa	Known RBP	11.63	□□□□□ -0.55
PPFIA1-223	ENST00000532793	C11orf49	Q9H6J7	331 aa		11.63	□□□□□ -0.55
PPFIA1-223	ENST00000532793	RBPJL	Q9UBG7	517 aa		11.63	□□□□□ -0.55
PPFIA1-223	ENST00000532793	CENPF	P49454	3210 aa		11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793		A0A1W2PPC1	479 aa		11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793	LCE2B	O14633	110 aa		11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793	VCAM1	P19320	739 aa		11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793	PLCD1	P51178	756 aa		11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793	TRIM32	Q13049	653 aa		11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793	MFSD14C	Q5VZR4	134 aa		11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793		Q6ZNB5	142 aa		11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793	CATSPERG	Q6ZRH7	1159 aa		11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793	C7orf61	Q8IZ16	206 aa		11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793	DIS3L	Q8TF46	1054 aa	Known RBP	11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793	TANGO6	Q9C0B7	1094 aa		11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793	PORCN	Q9H237	461 aa		11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793	SH2D4A	Q9H788	454 aa		11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793	ARHGEF10L	Q9HCE6	1279 aa		11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793	PAG1	Q9NWQ8	432 aa		11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793	SWAP70	Q9UH65	585 aa		11.62	□□□□□ -0.55
PPFIA1-223	ENST00000532793	PEX10	O60683	326 aa		11.61	□□□□□ -0.55
PPFIA1-223	ENST00000532793	SHMT1	P34896	483 aa		11.61	□□□□□ -0.55
PPFIA1-223	ENST00000532793	MAP2K5	Q13163	448 aa		11.61	□□□□□ -0.55
PPFIA1-223	ENST00000532793	SEPT2	Q15019	361 aa		11.61	□□□□□ -0.55
PPFIA1-223	ENST00000532793		Q3C1V9	767 aa		11.61	□□□□□ -0.55
PPFIA1-223	ENST00000532793	ZSCAN25	Q6NSZ9	544 aa		11.61	□□□□□ -0.55
PPFIA1-223	ENST00000532793	TMEM179	Q6ZVK1	233 aa		11.61	□□□□□ -0.55
PPFIA1-223	ENST00000532793	LCORL	Q8N3X6	602 aa		11.61	□□□□□ -0.55
PPFIA1-223	ENST00000532793	SDR42E1	Q8WUS8	393 aa		11.61	□□□□□ -0.55
PPFIA1-223	ENST00000532793	EDC3	Q96F86	508 aa	Known RBP	11.61	□□□□□ -0.55
PPFIA1-223	ENST00000532793	BOLA2	Q9H3K6	86 aa		11.61	□□□□□ -0.55
PPFIA1-223	ENST00000532793	RCAN3	Q9UKA8	241 aa		11.61	□□□□□ -0.55
PPFIA1-223	ENST00000532793	SLC15A5	A6NIM6	579 aa		11.6	□□□□□ -0.55
PPFIA1-223	ENST00000532793	CNGA1	P29973	690 aa		11.6	□□□□□ -0.55
PPFIA1-223	ENST00000532793	ATP2B2	Q01814	1243 aa		11.6	□□□□□ -0.55
PPFIA1-223	ENST00000532793	CACNB2	Q08289	660 aa	Predicted RBP	11.6	□□□□□ -0.55
PPFIA1-223	ENST00000532793	MORN1	Q5T089	497 aa		11.6	□□□□□ -0.55

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