RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 ECE2O60344 883 aa17.47■□□□□ 0.39
SRPRA-206ENST00000532259 IGSF3O75054 1194 aa17.47■□□□□ 0.39
SRPRA-206ENST00000532259 PPP6R2O75170 966 aa17.47■□□□□ 0.39
SRPRA-206ENST00000532259 TYW1BQ6NUM6 668 aa17.47■□□□□ 0.39
SRPRA-206ENST00000532259 SCG2P13521 617 aa17.46■□□□□ 0.39
SRPRA-206ENST00000532259 CLCN1P35523 988 aa17.46■□□□□ 0.39
SRPRA-206ENST00000532259 NLRP5P59047 1200 aa17.46■□□□□ 0.39
SRPRA-206ENST00000532259 RILPL1Q5EBL4 403 aa17.46■□□□□ 0.39
SRPRA-206ENST00000532259 STYK1Q6J9G0 422 aa17.46■□□□□ 0.39
SRPRA-206ENST00000532259 PDILTQ8N807 584 aa17.46■□□□□ 0.39
SRPRA-206ENST00000532259 C7orf43Q8WVR3 580 aa17.46■□□□□ 0.39
SRPRA-206ENST00000532259 TCP10Q12799 353 aa17.46■□□□□ 0.39
SRPRA-206ENST00000532259 DPCR1Q3MIW9 517 aa17.46■□□□□ 0.39
SRPRA-206ENST00000532259 USP17L2Q6R6M4 530 aa17.46■□□□□ 0.39
SRPRA-206ENST00000532259 USP49Q70CQ1 688 aa17.46■□□□□ 0.39
SRPRA-206ENST00000532259 KRI1Q8N9T8 703 aaKnown RBP17.46■□□□□ 0.39
SRPRA-206ENST00000532259 ANKS1AQ92625 1134 aa17.46■□□□□ 0.39
SRPRA-206ENST00000532259 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.46■□□□□ 0.39
SRPRA-206ENST00000532259 NOL7Q9UMY1 257 aaKnown RBP17.46■□□□□ 0.39
SRPRA-206ENST00000532259 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.46■□□□□ 0.392e-7■■■■□ 19.3
SRPRA-206ENST00000532259 KIF5BP33176 963 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 RBM5P52756 815 aaKnown RBP eCLIP17.45■□□□□ 0.383e-10■■■■■ 36.2
SRPRA-206ENST00000532259 PNOCQ13519 176 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 ZNF174Q15697 407 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 RASGRP4Q8TDF6 673 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 TRIM5Q9C035 493 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 TCP11L1Q9NUJ3 509 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 KIAA1468Q9P260 1216 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 FAM196BA6NMK8 535 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 FOXN1O15353 648 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 AKR1B1P15121 316 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 CRKP46108 304 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 GRM4Q14833 912 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 ZRSR1Q15695 479 aaKnown RBP17.45■□□□□ 0.38
SRPRA-206ENST00000532259 PFKFB3Q16875 520 aaPredicted RBP17.45■□□□□ 0.38
SRPRA-206ENST00000532259 LONRF3Q496Y0 759 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 PIK3AP1Q6ZUJ8 805 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 PODNQ7Z5L7 613 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 NEDD1Q8NHV4 660 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 TNFRSF25Q93038 417 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 FBXO2Q9UK22 296 aaPredicted RBP17.45■□□□□ 0.38
SRPRA-206ENST00000532259 HPSEQ9Y251 543 aa17.45■□□□□ 0.38
SRPRA-206ENST00000532259 RGPD3A6NKT7 1758 aaPredicted RBP17.44■□□□□ 0.38
SRPRA-206ENST00000532259 RGPD4Q7Z3J3 1758 aa17.44■□□□□ 0.38
SRPRA-206ENST00000532259 SHROOM1Q2M3G4 852 aaPredicted RBP17.44■□□□□ 0.38
SRPRA-206ENST00000532259 RESP18Q5W5W9 173 aa17.44■□□□□ 0.38
SRPRA-206ENST00000532259 CERS3Q8IU89 383 aa17.44■□□□□ 0.38
SRPRA-206ENST00000532259 TEKT1Q969V4 418 aa17.44■□□□□ 0.38
SRPRA-206ENST00000532259 VAT1LQ9HCJ6 419 aa17.44■□□□□ 0.38
SRPRA-206ENST00000532259 KCNH3Q9ULD8 1083 aa17.44■□□□□ 0.38
SRPRA-206ENST00000532259 ZKSCAN5Q9Y2L8 839 aa17.44■□□□□ 0.38
SRPRA-206ENST00000532259 BECN2A8MW95 431 aa17.44■□□□□ 0.38
SRPRA-206ENST00000532259 GOLGA6L19H0YKK7 550 aa17.44■□□□□ 0.38
SRPRA-206ENST00000532259 CUTAO60888 179 aa17.44■□□□□ 0.38
SRPRA-206ENST00000532259 GABPAQ06546 454 aa17.44■□□□□ 0.38
SRPRA-206ENST00000532259 DACT2Q5SW24 774 aa17.44■□□□□ 0.38
SRPRA-206ENST00000532259 HOMER1Q86YM7 354 aa17.44■□□□□ 0.38
SRPRA-206ENST00000532259 AOPEPQ8N6M6 819 aa17.44■□□□□ 0.38
SRPRA-206ENST00000532259 IQCB1Q15051 598 aa17.43■□□□□ 0.38
SRPRA-206ENST00000532259 DRC7Q8IY82 874 aa17.43■□□□□ 0.38
SRPRA-206ENST00000532259 BRMS1Q9HCU9 246 aa17.43■□□□□ 0.38
SRPRA-206ENST00000532259 ANO10Q9NW15 660 aa17.43■□□□□ 0.38
SRPRA-206ENST00000532259 SUGT1Q9Y2Z0 365 aa17.43■□□□□ 0.38
SRPRA-206ENST00000532259 TRIM75PA6NK02 468 aa17.43■□□□□ 0.38
SRPRA-206ENST00000532259 HS1BP3Q53T59 392 aa17.43■□□□□ 0.38
SRPRA-206ENST00000532259 HEATR3Q7Z4Q2 680 aa17.43■□□□□ 0.38
SRPRA-206ENST00000532259 LRRC47Q8N1G4 583 aaKnown RBP17.43■□□□□ 0.38
SRPRA-206ENST00000532259 CNKSR1Q969H4 720 aa17.43■□□□□ 0.38
SRPRA-206ENST00000532259 ZNF287Q9HBT7 754 aa17.43■□□□□ 0.38
SRPRA-206ENST00000532259 YDJCA8MPS7 323 aa17.42■□□□□ 0.38
SRPRA-206ENST00000532259 USP17L5A8MUK1 530 aa17.42■□□□□ 0.38
SRPRA-206ENST00000532259 POLR2DO15514 142 aaKnown RBP17.42■□□□□ 0.38
SRPRA-206ENST00000532259 PTPREP23469 700 aa17.42■□□□□ 0.38
SRPRA-206ENST00000532259 GRAMD1CQ8IYS0 662 aa17.42■□□□□ 0.38
SRPRA-206ENST00000532259 C17orf53Q8N3J3 647 aaPredicted RBP17.42■□□□□ 0.38
SRPRA-206ENST00000532259 OSBPL5Q9H0X9 879 aaPredicted RBP17.42■□□□□ 0.38
SRPRA-206ENST00000532259 CSRNP2Q9H175 543 aa17.42■□□□□ 0.38
SRPRA-206ENST00000532259 FOCADQ5VW36 1801 aa17.42■□□□□ 0.38
SRPRA-206ENST00000532259 PALM3A6NDB9 673 aaPredicted RBP17.42■□□□□ 0.38
SRPRA-206ENST00000532259 KLRF2D3W0D1 207 aa17.42■□□□□ 0.38
SRPRA-206ENST00000532259 HHIPL2Q6UWX4 724 aa17.42■□□□□ 0.38
SRPRA-206ENST00000532259 DHX40Q8IX18 779 aaKnown RBP17.42■□□□□ 0.38
SRPRA-206ENST00000532259 CNNM3Q8NE01 707 aa17.42■□□□□ 0.38
SRPRA-206ENST00000532259 UBA5Q9GZZ9 404 aa17.42■□□□□ 0.38
SRPRA-206ENST00000532259 FRMPD2Q68DX3 1309 aaPredicted RBP17.41■□□□□ 0.38
SRPRA-206ENST00000532259 ATP2B2Q01814 1243 aa17.41■□□□□ 0.38
SRPRA-206ENST00000532259 STRIP1Q5VSL9 837 aa17.41■□□□□ 0.38
SRPRA-206ENST00000532259 WWC2Q6AWC2 1192 aa17.41■□□□□ 0.38
SRPRA-206ENST00000532259 CEP57L1Q8IYX8 460 aa17.41■□□□□ 0.38
SRPRA-206ENST00000532259 SERPINB13Q9UIV8 391 aa17.41■□□□□ 0.38
SRPRA-206ENST00000532259 SHMT1P34896 483 aa17.41■□□□□ 0.38
SRPRA-206ENST00000532259 FOXP4Q8IVH2 680 aaPredicted RBP17.41■□□□□ 0.38
SRPRA-206ENST00000532259 KLHL34Q8N239 644 aa17.41■□□□□ 0.38
SRPRA-206ENST00000532259 EPSTI1Q96J88 318 aa17.41■□□□□ 0.38
SRPRA-206ENST00000532259 NRBP1Q9UHY1 535 aa17.41■□□□□ 0.38
SRPRA-206ENST00000532259 DDTLA6NHG4 134 aaPredicted RBP17.4■□□□□ 0.38
SRPRA-206ENST00000532259 MPHOSPH10O00566 681 aaKnown RBP17.4■□□□□ 0.38
SRPRA-206ENST00000532259 MCM7P33993 719 aa17.4■□□□□ 0.38
SRPRA-206ENST00000532259 METTL16Q86W50 562 aaKnown RBP17.4■□□□□ 0.38
SRPRA-206ENST00000532259 DNAJC18Q9H819 358 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms