RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 USP17L19D6RCP7 530 aa18.4■□□□□ 0.54
DEPDC7-204ENST00000532078 USP17L20D6RJB6 530 aa18.4■□□□□ 0.54
DEPDC7-204ENST00000532078 EVI5O60447 810 aa18.4■□□□□ 0.54
DEPDC7-204ENST00000532078 XRCC5P13010 732 aaKnown RBP18.4■□□□□ 0.54
DEPDC7-204ENST00000532078 SHMT1P34896 483 aa18.4■□□□□ 0.54
DEPDC7-204ENST00000532078 USP17L24Q0WX57 530 aa18.4■□□□□ 0.54
DEPDC7-204ENST00000532078 TRMT44Q8IYL2 757 aaKnown RBP18.4■□□□□ 0.54
DEPDC7-204ENST00000532078 TRIB2Q92519 343 aa18.4■□□□□ 0.54
DEPDC7-204ENST00000532078 TMEM121BQ9BXQ6 578 aaPredicted RBP18.4■□□□□ 0.54
DEPDC7-204ENST00000532078 ZNF532Q9HCE3 1301 aa18.4■□□□□ 0.54
DEPDC7-204ENST00000532078 PEX10O60683 326 aa18.39■□□□□ 0.53
DEPDC7-204ENST00000532078 ZKSCAN1P17029 563 aaPredicted RBP18.39■□□□□ 0.53
DEPDC7-204ENST00000532078 CYP2B6P20813 491 aa18.39■□□□□ 0.53
DEPDC7-204ENST00000532078 PLCD1P51178 756 aa18.39■□□□□ 0.53
DEPDC7-204ENST00000532078 TRIM32Q13049 653 aa18.39■□□□□ 0.53
DEPDC7-204ENST00000532078 NECAB2Q7Z6G3 386 aa18.39■□□□□ 0.53
DEPDC7-204ENST00000532078 SIRT2Q8IXJ6 389 aa18.39■□□□□ 0.53
DEPDC7-204ENST00000532078 PAWRQ96IZ0 340 aaKnown RBP18.39■□□□□ 0.53
DEPDC7-204ENST00000532078 PORCNQ9H237 461 aa18.39■□□□□ 0.53
DEPDC7-204ENST00000532078 CWC22Q9HCG8 908 aaKnown RBP18.39■□□□□ 0.53
DEPDC7-204ENST00000532078 MCM9Q9NXL9 1143 aa18.39■□□□□ 0.53
DEPDC7-204ENST00000532078 RABGAP1Q9Y3P9 1069 aa18.39■□□□□ 0.53
DEPDC7-204ENST00000532078 VCAM1P19320 739 aa18.38■□□□□ 0.53
DEPDC7-204ENST00000532078 RGS2P41220 211 aa18.38■□□□□ 0.53
DEPDC7-204ENST00000532078 CCNA1P78396 465 aa18.38■□□□□ 0.53
DEPDC7-204ENST00000532078 MAP3K21Q5TCX8 1036 aa18.38■□□□□ 0.53
DEPDC7-204ENST00000532078 GPR142Q7Z601 462 aa18.38■□□□□ 0.53
DEPDC7-204ENST00000532078 PLEKHH3Q7Z736 793 aa18.38■□□□□ 0.53
DEPDC7-204ENST00000532078 APBA2Q99767 749 aa18.38■□□□□ 0.53
DEPDC7-204ENST00000532078 BCL11AQ9H165 835 aa18.38■□□□□ 0.53
DEPDC7-204ENST00000532078 TCRBV5S4A2TA0A5A2 114 aa18.37■□□□□ 0.53
DEPDC7-204ENST00000532078 GLRX3O76003 335 aaKnown RBP18.37■□□□□ 0.53
DEPDC7-204ENST00000532078 GABPAQ06546 454 aa18.37■□□□□ 0.53
DEPDC7-204ENST00000532078 ACER1Q8TDN7 264 aa18.37■□□□□ 0.53
DEPDC7-204ENST00000532078 DIS3LQ8TF46 1054 aaKnown RBP18.37■□□□□ 0.53
DEPDC7-204ENST00000532078 PAG1Q9NWQ8 432 aa18.37■□□□□ 0.53
DEPDC7-204ENST00000532078 RBM27Q9P2N5 1060 aaKnown RBP18.37■□□□□ 0.53
DEPDC7-204ENST00000532078 RCAN3Q9UKA8 241 aa18.37■□□□□ 0.53
DEPDC7-204ENST00000532078 Q3C1V9 767 aa18.36■□□□□ 0.53
DEPDC7-204ENST00000532078 MORN1Q5T089 497 aa18.36■□□□□ 0.53
DEPDC7-204ENST00000532078 POTEEQ6S8J3 1075 aa18.36■□□□□ 0.53
DEPDC7-204ENST00000532078 LBX2Q6XYB7 198 aa18.36■□□□□ 0.53
DEPDC7-204ENST00000532078 CATSPERGQ6ZRH7 1159 aa18.36■□□□□ 0.53
DEPDC7-204ENST00000532078 LCORLQ8N3X6 602 aa18.36■□□□□ 0.53
DEPDC7-204ENST00000532078 SDR42E1Q8WUS8 393 aa18.36■□□□□ 0.53
DEPDC7-204ENST00000532078 USP6NLQ92738 828 aa18.36■□□□□ 0.53
DEPDC7-204ENST00000532078 ALPK3Q96L96 1907 aa18.36■□□□□ 0.53
DEPDC7-204ENST00000532078 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.36■□□□□ 0.53
DEPDC7-204ENST00000532078 DCP1AQ9NPI6 582 aaPredicted RBP18.36■□□□□ 0.53
DEPDC7-204ENST00000532078 MPHOSPH10O00566 681 aaKnown RBP18.35■□□□□ 0.53
DEPDC7-204ENST00000532078 ATP5JP18859 108 aa18.35■□□□□ 0.53
DEPDC7-204ENST00000532078 GUCY1A2P33402 732 aa18.35■□□□□ 0.53
DEPDC7-204ENST00000532078 SEPT2Q15019 361 aa18.35■□□□□ 0.53
DEPDC7-204ENST00000532078 BBXQ8WY36 941 aaPredicted RBP18.35■□□□□ 0.53
DEPDC7-204ENST00000532078 EDC3Q96F86 508 aaKnown RBP18.35■□□□□ 0.53
DEPDC7-204ENST00000532078 NBPF3Q9H094 633 aa18.35■□□□□ 0.53
DEPDC7-204ENST00000532078 PRO3102Q9H379 93 aa18.35■□□□□ 0.53
DEPDC7-204ENST00000532078 RPAP3Q9H6T3 665 aaPredicted RBP18.35■□□□□ 0.53
DEPDC7-204ENST00000532078 SWAP70Q9UH65 585 aa18.35■□□□□ 0.53
DEPDC7-204ENST00000532078 MYH8P13535 1937 aa18.35■□□□□ 0.53
DEPDC7-204ENST00000532078 CNMDO75829 334 aa18.34■□□□□ 0.53
DEPDC7-204ENST00000532078 MAP2K5Q13163 448 aa18.34■□□□□ 0.53
DEPDC7-204ENST00000532078 BOLA2Q9H3K6 86 aa18.34■□□□□ 0.53
DEPDC7-204ENST00000532078 ARMT1Q9H993 441 aa18.34■□□□□ 0.53
DEPDC7-204ENST00000532078 OGDHLQ9ULD0 1010 aa18.34■□□□□ 0.53
DEPDC7-204ENST00000532078 MYH7P12883 1935 aa18.33■□□□□ 0.53
DEPDC7-204ENST00000532078 SPDYE16A6NNV3 312 aaPredicted RBP18.33■□□□□ 0.52
DEPDC7-204ENST00000532078 MBD4O95243 580 aa18.33■□□□□ 0.52
DEPDC7-204ENST00000532078 ADD2P35612 726 aa18.33■□□□□ 0.52
DEPDC7-204ENST00000532078 CACNB2Q08289 660 aaPredicted RBP18.33■□□□□ 0.52
DEPDC7-204ENST00000532078 WDR78Q5VTH9 848 aa18.33■□□□□ 0.52
DEPDC7-204ENST00000532078 TMEM179Q6ZVK1 233 aa18.33■□□□□ 0.52
DEPDC7-204ENST00000532078 AMOTL1Q8IY63 956 aa18.33■□□□□ 0.52
DEPDC7-204ENST00000532078 HAUS7Q99871 368 aa18.33■□□□□ 0.52
DEPDC7-204ENST00000532078 C11orf49Q9H6J7 331 aa18.33■□□□□ 0.52
DEPDC7-204ENST00000532078 ATP8A2Q9NTI2 1148 aa18.33■□□□□ 0.52
DEPDC7-204ENST00000532078 IVNS1ABPQ9Y6Y0 642 aa18.33■□□□□ 0.52
DEPDC7-204ENST00000532078 A0A1W2PPC1 479 aa18.32■□□□□ 0.52
DEPDC7-204ENST00000532078 SLC15A5A6NIM6 579 aa18.32■□□□□ 0.52
DEPDC7-204ENST00000532078 CYP2D6P10635 497 aa18.32■□□□□ 0.52
DEPDC7-204ENST00000532078 CCL14Q16627 93 aa18.32■□□□□ 0.52
DEPDC7-204ENST00000532078 DDRGK1Q96HY6 314 aa18.32■□□□□ 0.52
DEPDC7-204ENST00000532078 LRRCC1Q9C099 1032 aa18.32■□□□□ 0.52
DEPDC7-204ENST00000532078 BTBD7Q9P203 1132 aa18.32■□□□□ 0.52
DEPDC7-204ENST00000532078 A0A0G2JMZ2 1700 aa18.32■□□□□ 0.52
DEPDC7-204ENST00000532078 C7orf61Q8IZ16 206 aa18.31■□□□□ 0.52
DEPDC7-204ENST00000532078 SLC44A5Q8NCS7 719 aa18.31■□□□□ 0.52
DEPDC7-204ENST00000532078 TANGO6Q9C0B7 1094 aa18.31■□□□□ 0.52
DEPDC7-204ENST00000532078 SH2D4AQ9H788 454 aa18.31■□□□□ 0.52
DEPDC7-204ENST00000532078 BAZ2AQ9UIF9 1905 aaKnown RBP18.31■□□□□ 0.52
DEPDC7-204ENST00000532078 ZNF236Q9UL36 1845 aa18.3■□□□□ 0.52
DEPDC7-204ENST00000532078 A0A1W2PRG0 241 aa18.3■□□□□ 0.52
DEPDC7-204ENST00000532078 PRKAB2O43741 272 aa18.3■□□□□ 0.52
DEPDC7-204ENST00000532078 PPP1R37O75864 691 aa18.3■□□□□ 0.52
DEPDC7-204ENST00000532078 PTPREP23469 700 aa18.3■□□□□ 0.52
DEPDC7-204ENST00000532078 GRB14Q14449 540 aa18.3■□□□□ 0.52
DEPDC7-204ENST00000532078 UBE3CQ15386 1083 aa18.3■□□□□ 0.52
DEPDC7-204ENST00000532078 MFSD14CQ5VZR4 134 aa18.3■□□□□ 0.52
DEPDC7-204ENST00000532078 ZSCAN25Q6NSZ9 544 aa18.3■□□□□ 0.52
DEPDC7-204ENST00000532078 LPAR1Q92633 364 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms