RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	GIT1	Q9Y2X7	761 aa		6.16	□□□□□ -1.42
ECHDC1-222	ENST00000531967	UPK3BL1	B0FP48	263 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	UPK3BL2	E5RIL1	263 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	PYGL	P06737	847 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	IDE	P14735	1019 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	CCND1	P24385	295 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	USP14	P54578	494 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	GRM1	Q13255	1194 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	DCTN1	Q14203	1278 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	CCDC129	Q6ZRS4	1044 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	CBARP	Q8N350	705 aa	Predicted RBP	6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	GLIS3	Q8NEA6	775 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	ZMAT2	Q96NC0	199 aa	Known RBP	6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	AIFM3	Q96NN9	605 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	SLC13A1	Q9BZW2	595 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	RSAD1	Q9HA92	442 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	PPM1H	Q9ULR3	514 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	NEMP1	O14524	444 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	NCAM2	O15394	837 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	MYBL2	P10244	700 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	GYS1	P13807	737 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	POU3F2	P20265	443 aa	Predicted RBP	6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	KRT20	P35900	424 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	NRL	P54845	237 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	RTN1	Q16799	776 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	RETSAT	Q6NUM9	610 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	HIBCH	Q6NVY1	386 aa	Predicted RBP	6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	NLRP8	Q86W28	1048 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	C19orf47	Q8N9M1	422 aa	Known RBP	6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	FUBP3	Q96I24	572 aa	Known RBP eCLIP	6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	SPAG5	Q96R06	1193 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	ANKEF1	Q9NU02	776 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967	PTPN22	Q9Y2R2	807 aa		6.15	□□□□□ -1.42
ECHDC1-222	ENST00000531967		A0A1W2PQH9	124 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	DNAJC8	O75937	253 aa	Predicted RBP	6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	CP	P00450	1065 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	RHCE	P18577	417 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	TFE3	P19532	575 aa	Predicted RBP	6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	GALNS	P34059	522 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	HOXD12	P35452	270 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	ID4	P47928	161 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	TM4SF4	P48230	202 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	WNT7B	P56706	349 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	RHD	Q02161	417 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	GRB10	Q13322	594 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	FAM209A	Q5JX71	171 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	GPATCH4	Q5T3I0	446 aa	Known RBP	6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	RUFY4	Q6ZNE9	571 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	FASTKD5	Q7L8L6	764 aa	Known RBP	6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	SAPCD2	Q86UD0	394 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	GALNT12	Q8IXK2	581 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	C7orf61	Q8IZ16	206 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	ALDH16A1	Q8IZ83	802 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	USP7	Q93009	1102 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	NUDT16L1	Q9BRJ7	211 aa	Known RBP	6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	FAM167B	Q9BTA0	163 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	KIAA1468	Q9P260	1216 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	GJD2	Q9UKL4	321 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	SYNDIG1L	A6NDD5	238 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	PHACTR2	O75167	634 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	APBA3	O96018	575 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	F13A1	P00488	732 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	LTF	P02788	710 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	APP	P05067	770 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	TPM2	P07951	284 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	IMPDH2	P12268	514 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	CTNNA1	P35221	906 aa	Known RBP	6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	NEK4	P51957	841 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	RAB15	P59190	212 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	GK5	Q6ZS86	529 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	CHST15	Q7LFX5	561 aa	Predicted RBP	6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	IPCEF1	Q8WWN9	437 aa	Predicted RBP	6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	MENT	Q9BUN1	341 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	MRPL4	Q9BYD3	311 aa	Known RBP	6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	IFT22	Q9H7X7	185 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	ATP6V0A4	Q9HBG4	840 aa		6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	ZCCHC17	Q9NP64	241 aa	Known RBP	6.14	□□□□□ -1.43
ECHDC1-222	ENST00000531967	ZPR1	O75312	459 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	TIPRL	O75663	272 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	NAT2	P11245	290 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	IARS	P41252	1262 aa	Known RBP	6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	RECQL	P46063	649 aa	Predicted RBP	6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	BPIFB3	P59826	476 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	TMEM240	Q5SV17	173 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	SH3PXD2A	Q5TCZ1	1133 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	BRINP3	Q76B58	766 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	FAM43A	Q8N2R8	423 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	TAB3	Q8N5C8	712 aa	Predicted RBP	6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	AFAP1L1	Q8TED9	768 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	ZFPM2	Q8WW38	1151 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	KCNK17	Q96T54	332 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	MTFR1L	Q9H019	292 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	MYLK2	Q9H1R3	596 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	CRTAC1	Q9NQ79	661 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	HELLS	Q9NRZ9	838 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	C1orf112	Q9NSG2	853 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	PPP4R2	Q9NY27	417 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	POTEB3	A0JP26	581 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	IQCA1L	A6NCM1	817 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	PRKD3	O94806	890 aa		6.13	□□□□□ -1.43

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