RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 SPICE1Q8N0Z3 855 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 SMARCC1Q92922 1105 aaPredicted RBP5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 E2F7Q96AV8 911 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 ORAI3Q9BRQ5 295 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 YIPF4Q9BSR8 244 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 SARGQ9BW04 601 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 SLC13A1Q9BZW2 595 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 MUC3BQ9H195 1237 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 FBRSQ9HAH7 460 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 TRIM39Q9HCM9 518 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 LUC7LQ9NQ29 371 aaKnown RBP5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 JADE2Q9NQC1 790 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 OBP2AQ9NY56 170 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 USP25Q9UHP3 1055 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 ADAM30Q9UKF2 790 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 PCDHGC4Q9Y5F7 938 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 LOC102724428A0A0B4J2F2 783 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 FAM83GA6ND36 823 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 GABRDO14764 452 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 ERC2O15083 957 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 TBX3O15119 743 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 ATXN7O15265 892 aaPredicted RBP5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 DNAJC8O75937 253 aaPredicted RBP5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 APPP05067 770 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 ITGB2P05107 769 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 BPIP17213 487 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 VCAM1P19320 739 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 SIK1P57059 783 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 SRSF11Q05519 484 aaKnown RBP5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 SFSWAPQ12872 951 aaKnown RBP5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 KRT72Q14CN4 511 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 ZYXQ15942 572 aaKnown RBP5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 SV2CQ496J9 727 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 HDXQ7Z353 690 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 PDZD3Q86UT5 571 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 CACTIN-AS1Q8N1I8 211 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 BEND7Q8N7W2 519 aaPredicted RBP5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 ENAHQ8N8S7 591 aaPredicted RBP5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 GSTCDQ8NEC7 633 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 PJA1Q8NG27 643 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 OR2W6PQ8NHA6 318 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 GRIN3AQ8TCU5 1115 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 JPH3Q8WXH2 748 aaPredicted RBP5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 SLC7A3Q8WY07 619 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 USP7Q93009 1102 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 SLC9A7Q96T83 725 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 SMAD5Q99717 465 aaKnown RBP5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 RHOBTB2Q9BYZ6 727 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 KRT82Q9NSB4 513 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 REV1Q9UBZ9 1251 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 FBXO9Q9UK97 447 aaPredicted RBP5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 TRHDEQ9UKU6 1024 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 SOX13Q9UN79 622 aa5.49□□□□□ -1.53
AC055878.1-201ENST00000531858 SLC35F4A4IF30 521 aa5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 FIGNL2A6NMB9 653 aa5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 NPHP1O15259 732 aa5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 CELA2BP08218 269 aaPredicted RBP5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 GSTP1P09211 210 aaKnown RBP5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 PTPRAP18433 802 aa5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 IGFALSP35858 605 aa5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 ZNF157P51786 506 aaPredicted RBP5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 NEK4P51957 841 aa5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 KRT85P78386 507 aa5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 IRX6P78412 446 aaPredicted RBP5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 GTF2H3Q13889 308 aa5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 ZNF423Q2M1K9 1284 aa5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 FOXD4L6Q3SYB3 417 aaPredicted RBP5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 C10orf62Q5T681 223 aaPredicted RBP5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 PKN3Q6P5Z2 889 aa5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 ADAMTSL4Q6UY14 1074 aa5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 FOXD4L3Q6VB84 417 aaPredicted RBP5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 NSMFQ6X4W1 530 aa5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 UBE2R2Q712K3 238 aaPredicted RBP5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 CNTD1Q8N815 330 aa5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 TTC17Q96AE7 1141 aa5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 ADAM19Q9H013 955 aa5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 SOX17Q9H6I2 414 aaPredicted RBP5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 INTUQ9ULD6 942 aa5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 SCINQ9Y6U3 715 aa5.48□□□□□ -1.53
AC055878.1-201ENST00000531858 FAM177BA6PVY3 158 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 TRPA1O75762 1119 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 APBA3O96018 575 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 GHRHP01286 108 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 CAPNS1P04632 268 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 PABPC1P11940 636 aaKnown RBP5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 NAT1P18440 290 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 PLCG1P19174 1290 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 BDNFP23560 247 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 PMS1P54277 932 aaKnown RBP5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 PPP2R2AP63151 447 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 PTPN11Q06124 597 aaPredicted RBP5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 SPEM2Q0P670 501 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 FOXD4Q12950 439 aaPredicted RBP5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 GBX1Q14549 363 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 SETDB1Q15047 1291 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 TMEM240Q5SV17 173 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 KRBA2Q6ZNG9 492 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 VN1R5Q7Z5H4 357 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 SMAP1Q8IYB5 467 aaPredicted RBP5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 TMTC2Q8N394 836 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms