RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 DNAJC21Q5F1R6 531 aaKnown RBP12.77□□□□□ -0.36
NXF1-211ENST00000531709 ANKIB1Q9P2G1 1089 aa12.77□□□□□ -0.36
NXF1-211ENST00000531709 ZNF652Q9Y2D9 606 aa12.77□□□□□ -0.36
NXF1-211ENST00000531709 TOB1P50616 345 aaPredicted RBP12.77□□□□□ -0.37
NXF1-211ENST00000531709 PDE4CQ08493 712 aa12.77□□□□□ -0.37
NXF1-211ENST00000531709 TRIM65Q6PJ69 517 aa12.77□□□□□ -0.37
NXF1-211ENST00000531709 CACNA2D4Q7Z3S7 1137 aa12.77□□□□□ -0.37
NXF1-211ENST00000531709 NAA15Q9BXJ9 866 aaKnown RBP12.77□□□□□ -0.37
NXF1-211ENST00000531709 MMRN2Q9H8L6 949 aa12.77□□□□□ -0.37
NXF1-211ENST00000531709 JCADQ9P266 1359 aa12.77□□□□□ -0.37
NXF1-211ENST00000531709 BAZ2BQ9UIF8 2168 aaKnown RBP12.77□□□□□ -0.37
NXF1-211ENST00000531709 KRT86O43790 486 aa12.77□□□□□ -0.37
NXF1-211ENST00000531709 NCAPH2Q6IBW4 605 aa12.77□□□□□ -0.37
NXF1-211ENST00000531709 TICAM2Q86XR7 235 aa12.77□□□□□ -0.37
NXF1-211ENST00000531709 GSDMAQ96QA5 445 aa12.77□□□□□ -0.37
NXF1-211ENST00000531709 CARD10Q9BWT7 1032 aa12.77□□□□□ -0.37
NXF1-211ENST00000531709 RNF26Q9BY78 433 aaPredicted RBP12.77□□□□□ -0.37
NXF1-211ENST00000531709 EXOC1Q9NV70 894 aa12.77□□□□□ -0.37
NXF1-211ENST00000531709 RBM28Q9NW13 759 aaKnown RBP12.77□□□□□ -0.37
NXF1-211ENST00000531709 MRFAP1Q9Y605 127 aa12.77□□□□□ -0.37
NXF1-211ENST00000531709 C1orf167Q5SNV9 1468 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 WDR19Q8NEZ3 1342 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 CSF1RP07333 972 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 CYLC1P35663 651 aaPredicted RBP12.76□□□□□ -0.37
NXF1-211ENST00000531709 BRD3Q15059 726 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 LETM2Q2VYF4 491 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 SUSD4Q5VX71 490 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 CCDC42Q96M95 316 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 ADGRG1Q9Y653 693 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 SPATA31A3Q5VYP0 1347 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 NMT2O60551 498 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 TSPY3P0CV98 308 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 TSPY8P0CW00 308 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 BMP6P22004 513 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 KCNJ6P48051 423 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 NTRK3Q16288 839 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 CSGALNACT2Q8N6G5 542 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 NKX2-3Q8TAU0 364 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 FOXP2O15409 715 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 COPB1P53618 953 aaKnown RBP12.76□□□□□ -0.37
NXF1-211ENST00000531709 MAP3K9P80192 1104 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 RAD9BQ6WBX8 426 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 ABCB6Q9NP58 842 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 GDAQ9Y2T3 454 aa12.76□□□□□ -0.37
NXF1-211ENST00000531709 KIF5AQ12840 1032 aa12.75□□□□□ -0.37
NXF1-211ENST00000531709 CUL4BQ13620 913 aa12.75□□□□□ -0.37
NXF1-211ENST00000531709 KRT31Q15323 416 aa12.75□□□□□ -0.37
NXF1-211ENST00000531709 PYM1Q9BRP8 204 aaKnown RBP12.75□□□□□ -0.37
NXF1-211ENST00000531709 NBPF3Q9H094 633 aa12.75□□□□□ -0.37
NXF1-211ENST00000531709 PLEKHA4Q9H4M7 779 aa12.75□□□□□ -0.37
NXF1-211ENST00000531709 ADAM21Q9UKJ8 722 aa12.75□□□□□ -0.37
NXF1-211ENST00000531709 MYO6Q9UM54 1294 aa12.75□□□□□ -0.37
NXF1-211ENST00000531709 EPN1Q9Y6I3 576 aaPredicted RBP12.75□□□□□ -0.37
NXF1-211ENST00000531709 CCDC151A5D8V7 595 aa12.75□□□□□ -0.37
NXF1-211ENST00000531709 USO1O60763 962 aaKnown RBP12.75□□□□□ -0.37
NXF1-211ENST00000531709 MFAP3LO75121 409 aa12.75□□□□□ -0.37
NXF1-211ENST00000531709 PPARDQ03181 441 aa12.75□□□□□ -0.37
NXF1-211ENST00000531709 TRIM28Q13263 835 aaKnown RBP12.75□□□□□ -0.37
NXF1-211ENST00000531709 UIMC1Q96RL1 719 aa12.75□□□□□ -0.37
NXF1-211ENST00000531709 TFRCP02786 760 aaKnown RBP12.75□□□□□ -0.37
NXF1-211ENST00000531709 CALML3P27482 149 aa12.75□□□□□ -0.37
NXF1-211ENST00000531709 OR8K1Q8NGG5 319 aa12.75□□□□□ -0.37
NXF1-211ENST00000531709 SUGCTQ9HAC7 445 aa12.75□□□□□ -0.37
NXF1-211ENST00000531709 SEC63Q9UGP8 760 aaKnown RBP12.75□□□□□ -0.37
NXF1-211ENST00000531709 FAN1Q9Y2M0 1017 aa12.75□□□□□ -0.37
NXF1-211ENST00000531709 OVOS2A0A0G2JMS6 1433 aa12.75□□□□□ -0.37
NXF1-211ENST00000531709 KRT18P05783 430 aaKnown RBP12.74□□□□□ -0.37
NXF1-211ENST00000531709 KRT83P78385 493 aa12.74□□□□□ -0.37
NXF1-211ENST00000531709 PDE4DQ08499 809 aa12.74□□□□□ -0.37
NXF1-211ENST00000531709 IQCEQ6IPM2 695 aa12.74□□□□□ -0.37
NXF1-211ENST00000531709 PANX2Q96RD6 677 aa12.74□□□□□ -0.37
NXF1-211ENST00000531709 FAM217BQ9NTX9 383 aaPredicted RBP12.74□□□□□ -0.37
NXF1-211ENST00000531709 SLAIN2Q9P270 581 aa12.74□□□□□ -0.37
NXF1-211ENST00000531709 ARHGAP23Q9P227 1491 aa12.74□□□□□ -0.37
NXF1-211ENST00000531709 RPN1P04843 607 aaKnown RBP12.74□□□□□ -0.37
NXF1-211ENST00000531709 FXR1P51114 621 aaKnown RBP eCLIP12.74□□□□□ -0.37
NXF1-211ENST00000531709 NAPAP54920 295 aa12.74□□□□□ -0.37
NXF1-211ENST00000531709 ARID5AQ03989 594 aa12.74□□□□□ -0.37
NXF1-211ENST00000531709 ENAHQ8N8S7 591 aaPredicted RBP12.74□□□□□ -0.37
NXF1-211ENST00000531709 STAG1Q8WVM7 1258 aa12.74□□□□□ -0.37
NXF1-211ENST00000531709 TRIM49BA6NDI0 452 aa12.74□□□□□ -0.37
NXF1-211ENST00000531709 TFAP4Q01664 338 aa12.74□□□□□ -0.37
NXF1-211ENST00000531709 NR1I3Q14994 352 aa12.74□□□□□ -0.37
NXF1-211ENST00000531709 INF2Q27J81 1249 aa12.74□□□□□ -0.37
NXF1-211ENST00000531709 NOC4LQ9BVI4 516 aaKnown RBP12.74□□□□□ -0.37
NXF1-211ENST00000531709 H0YHG0 523 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 SCG2P13521 617 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 KCNQ4P56696 695 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 JAKMIP2Q96AA8 810 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.73□□□□□ -0.37
NXF1-211ENST00000531709 INTS13Q9NVM9 706 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 A0A0U1RQJ8 604 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 ANKRD65E5RJM6 399 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 SRGAP2O75044 1071 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 GOLGA8HP0CJ92 632 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 CCDC93Q567U6 631 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 SAMD1Q6SPF0 538 aaPredicted RBP12.73□□□□□ -0.37
NXF1-211ENST00000531709 ATRIPQ8WXE1 791 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 SAP30BPQ9UHR5 308 aaKnown RBP12.73□□□□□ -0.37
NXF1-211ENST00000531709 STK36Q9NRP7 1315 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms