RNA–Protein interactions for RNA: ENST00000531668.1

CAPRIN1-210, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-210ENST00000531668 PEX10O60683 326 aa20.22■□□□□ 0.83
CAPRIN1-210ENST00000531668 BCRP11274 1271 aa20.22■□□□□ 0.83
CAPRIN1-210ENST00000531668 GCLCP48506 637 aaPredicted RBP20.22■□□□□ 0.83
CAPRIN1-210ENST00000531668 HERVK_113P62684 666 aa20.22■□□□□ 0.83
CAPRIN1-210ENST00000531668 CAP1Q01518 475 aa20.22■□□□□ 0.83
CAPRIN1-210ENST00000531668 KIAA1755Q5JYT7 1200 aa20.22■□□□□ 0.83
CAPRIN1-210ENST00000531668 NEDD1Q8NHV4 660 aa20.22■□□□□ 0.83
CAPRIN1-210ENST00000531668 VCPKMTQ9H867 229 aa20.22■□□□□ 0.83
CAPRIN1-210ENST00000531668 CTNNA3Q9UI47 895 aa20.22■□□□□ 0.83
CAPRIN1-210ENST00000531668 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.22■□□□□ 0.83
CAPRIN1-210ENST00000531668 ZMYM6O95789 1325 aa20.22■□□□□ 0.83
CAPRIN1-210ENST00000531668 IMMTQ16891 758 aaKnown RBP20.21■□□□□ 0.83
CAPRIN1-210ENST00000531668 BMP2KLQ5H9B9 411 aa20.21■□□□□ 0.83
CAPRIN1-210ENST00000531668 AKNAD1Q5T1N1 836 aa20.21■□□□□ 0.83
CAPRIN1-210ENST00000531668 CATSPERGQ6ZRH7 1159 aa20.21■□□□□ 0.83
CAPRIN1-210ENST00000531668 KIAA1211Q6ZU35 1233 aa20.21■□□□□ 0.83
CAPRIN1-210ENST00000531668 TBC1D10CQ8IV04 446 aa20.21■□□□□ 0.83
CAPRIN1-210ENST00000531668 LRRC47Q8N1G4 583 aaKnown RBP20.21■□□□□ 0.83
CAPRIN1-210ENST00000531668 ABHD8Q96I13 439 aa20.21■□□□□ 0.83
CAPRIN1-210ENST00000531668 NYAP2Q9P242 653 aa20.21■□□□□ 0.83
CAPRIN1-210ENST00000531668 MTMR7Q9Y216 660 aa20.21■□□□□ 0.83
CAPRIN1-210ENST00000531668 CCDC85CA6NKD9 419 aa20.2■□□□□ 0.82
CAPRIN1-210ENST00000531668 SGSM2O43147 1006 aa20.2■□□□□ 0.82
CAPRIN1-210ENST00000531668 NMT2O60551 498 aa20.2■□□□□ 0.82
CAPRIN1-210ENST00000531668 FCGRTP55899 365 aa20.2■□□□□ 0.82
CAPRIN1-210ENST00000531668 PTH1RQ03431 593 aa20.2■□□□□ 0.82
CAPRIN1-210ENST00000531668 PKN2Q16513 984 aaKnown RBP20.2■□□□□ 0.82
CAPRIN1-210ENST00000531668 CCAR1Q8IX12 1150 aaKnown RBP20.2■□□□□ 0.82
CAPRIN1-210ENST00000531668 RNF41Q9H4P4 317 aaPredicted RBP20.2■□□□□ 0.82
CAPRIN1-210ENST00000531668 MTMR4Q9NYA4 1195 aa20.2■□□□□ 0.82
CAPRIN1-210ENST00000531668 STX8Q9UNK0 236 aa20.2■□□□□ 0.82
CAPRIN1-210ENST00000531668 ZSWIM8A7E2V4 1837 aa20.19■□□□□ 0.82
CAPRIN1-210ENST00000531668 ORC4O43929 436 aa20.19■□□□□ 0.82
CAPRIN1-210ENST00000531668 FLOT1O75955 427 aa20.19■□□□□ 0.82
CAPRIN1-210ENST00000531668 TTLL1O95922 423 aa20.19■□□□□ 0.82
CAPRIN1-210ENST00000531668 FBXO46Q6PJ61 603 aaPredicted RBP20.19■□□□□ 0.82
CAPRIN1-210ENST00000531668 LPAR1Q92633 364 aa20.19■□□□□ 0.82
CAPRIN1-210ENST00000531668 TRIM47Q96LD4 638 aa20.19■□□□□ 0.82
CAPRIN1-210ENST00000531668 NUP88Q99567 741 aaPredicted RBP20.19■□□□□ 0.82
CAPRIN1-210ENST00000531668 NBPF3Q9H094 633 aa20.19■□□□□ 0.82
CAPRIN1-210ENST00000531668 IGKV6D-41A0A0C4DH26 115 aa20.18■□□□□ 0.82
CAPRIN1-210ENST00000531668 CTGFP29279 349 aa20.18■□□□□ 0.82
CAPRIN1-210ENST00000531668 FAM110CQ1W6H9 321 aa20.18■□□□□ 0.82
CAPRIN1-210ENST00000531668 FAM83BQ5T0W9 1011 aa20.18■□□□□ 0.82
CAPRIN1-210ENST00000531668 CASC1Q6TDU7 716 aa20.18■□□□□ 0.82
CAPRIN1-210ENST00000531668 STAG1Q8WVM7 1258 aa20.18■□□□□ 0.82
CAPRIN1-210ENST00000531668 CWC22Q9HCG8 908 aaKnown RBP20.18■□□□□ 0.82
CAPRIN1-210ENST00000531668 F5H6K3 240 aa20.17■□□□□ 0.82
CAPRIN1-210ENST00000531668 TNPO2O14787 897 aaKnown RBP20.17■□□□□ 0.82
CAPRIN1-210ENST00000531668 WDR46O15213 610 aaKnown RBP20.17■□□□□ 0.82
CAPRIN1-210ENST00000531668 HOXD10P28358 340 aa20.17■□□□□ 0.82
CAPRIN1-210ENST00000531668 KLRC3Q07444 240 aa20.17■□□□□ 0.82
CAPRIN1-210ENST00000531668 COG2Q14746 738 aa20.17■□□□□ 0.82
CAPRIN1-210ENST00000531668 GPRC5AQ8NFJ5 357 aa20.17■□□□□ 0.82
CAPRIN1-210ENST00000531668 ESYT1Q9BSJ8 1104 aa20.17■□□□□ 0.82
CAPRIN1-210ENST00000531668 TXNRD2Q9NNW7 524 aa20.17■□□□□ 0.82
CAPRIN1-210ENST00000531668 RBPJLQ9UBG7 517 aa20.17■□□□□ 0.82
CAPRIN1-210ENST00000531668 PTPN22Q9Y2R2 807 aa20.17■□□□□ 0.82
CAPRIN1-210ENST00000531668 NEDD4P46934 1319 aa20.17■□□□□ 0.82
CAPRIN1-210ENST00000531668 MYH4Q9Y623 1939 aa20.17■□□□□ 0.82
CAPRIN1-210ENST00000531668 GREB1LQ9C091 1923 aaPredicted RBP20.16■□□□□ 0.82
CAPRIN1-210ENST00000531668 CDC45O75419 566 aa20.16■□□□□ 0.82
CAPRIN1-210ENST00000531668 NDUFB10O96000 172 aa20.16■□□□□ 0.82
CAPRIN1-210ENST00000531668 FGRP09769 529 aa20.16■□□□□ 0.82
CAPRIN1-210ENST00000531668 WDR78Q5VTH9 848 aa20.16■□□□□ 0.82
CAPRIN1-210ENST00000531668 GTF3C2Q8WUA4 911 aaPredicted RBP20.16■□□□□ 0.82
CAPRIN1-210ENST00000531668 ESR2Q92731 530 aa20.16■□□□□ 0.82
CAPRIN1-210ENST00000531668 ZKSCAN3Q9BRR0 538 aa20.16■□□□□ 0.82
CAPRIN1-210ENST00000531668 IL17RBQ9NRM6 502 aa20.16■□□□□ 0.82
CAPRIN1-210ENST00000531668 HOXC10Q9NYD6 342 aa20.16■□□□□ 0.82
CAPRIN1-210ENST00000531668 HPS5Q9UPZ3 1129 aa20.16■□□□□ 0.82
CAPRIN1-210ENST00000531668 U3KPZ7 1027 aaPredicted RBP20.16■□□□□ 0.82
CAPRIN1-210ENST00000531668 SPDYE16A6NNV3 312 aaPredicted RBP20.15■□□□□ 0.82
CAPRIN1-210ENST00000531668 B4E1Z4 1266 aa20.15■□□□□ 0.82
CAPRIN1-210ENST00000531668 KDM4AO75164 1064 aa20.15■□□□□ 0.82
CAPRIN1-210ENST00000531668 PLS1Q14651 629 aa20.15■□□□□ 0.82
CAPRIN1-210ENST00000531668 Q3C1V9 767 aa20.15■□□□□ 0.82
CAPRIN1-210ENST00000531668 PPP4R3BQ5MIZ7 849 aa20.15■□□□□ 0.82
CAPRIN1-210ENST00000531668 SLFN13Q68D06 897 aa20.15■□□□□ 0.82
CAPRIN1-210ENST00000531668 COA7Q96BR5 231 aa20.15■□□□□ 0.82
CAPRIN1-210ENST00000531668 ANO2Q9NQ90 1003 aa20.15■□□□□ 0.82
CAPRIN1-210ENST00000531668 FBXO28Q9NVF7 368 aa20.15■□□□□ 0.82
CAPRIN1-210ENST00000531668 PTCH2Q9Y6C5 1203 aa20.15■□□□□ 0.82
CAPRIN1-210ENST00000531668 MYPNQ86TC9 1320 aa20.15■□□□□ 0.82
CAPRIN1-210ENST00000531668 PLIN4Q96Q06 1357 aa20.15■□□□□ 0.82
CAPRIN1-210ENST00000531668 GNRH1P01148 92 aa20.14■□□□□ 0.81
CAPRIN1-210ENST00000531668 PCP11498 1178 aaKnown RBP20.14■□□□□ 0.81
CAPRIN1-210ENST00000531668 ERVK-9P63128 1117 aa20.14■□□□□ 0.81
CAPRIN1-210ENST00000531668 ERVK-24P63145 666 aa20.14■□□□□ 0.81
CAPRIN1-210ENST00000531668 NKX2-3Q8TAU0 364 aa20.14■□□□□ 0.81
CAPRIN1-210ENST00000531668 RAET1EQ8TD07 263 aa20.14■□□□□ 0.81
CAPRIN1-210ENST00000531668 MORF4L1Q9UBU8 362 aa20.14■□□□□ 0.81
CAPRIN1-210ENST00000531668 RABGAP1Q9Y3P9 1069 aa20.14■□□□□ 0.81
CAPRIN1-210ENST00000531668 RBM8AQ9Y5S9 174 aaKnown RBP20.14■□□□□ 0.81
CAPRIN1-210ENST00000531668 MYCP01106 439 aaPredicted RBP20.13■□□□□ 0.81
CAPRIN1-210ENST00000531668 DSG3P32926 999 aa20.13■□□□□ 0.81
CAPRIN1-210ENST00000531668 PRKCZQ05513 592 aa20.13■□□□□ 0.81
CAPRIN1-210ENST00000531668 IKQ13123 557 aaPredicted RBP20.13■□□□□ 0.81
CAPRIN1-210ENST00000531668 MKL1Q969V6 931 aa20.13■□□□□ 0.81
CAPRIN1-210ENST00000531668 ATG4CQ96DT6 458 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms