RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 CTSHP09668 335 aa5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 FAM163BP0C2L3 166 aa5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 VCAM1P19320 739 aa5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 LMNB1P20700 586 aa5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 ARNTP27540 789 aa5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 INHBEP58166 350 aa5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 RPS26P62854 115 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 FAAP100Q0VG06 881 aa5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 TTC31Q49AM3 519 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 C16orf87Q6PH81 154 aa5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 TPTE2Q6XPS3 522 aa5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 MYOCDQ8IZQ8 938 aa5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 PDILTQ8N807 584 aa5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 GALNT11Q8NCW6 608 aa5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 RSPH9Q9H1X1 276 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 A1CFQ9NQ94 594 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 KRT82Q9NSB4 513 aa5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 IRAK4Q9NWZ3 460 aa5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 SWAP70Q9UH65 585 aa5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 USP25Q9UHP3 1055 aa5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 DDX41Q9UJV9 622 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 ODF2LQ9ULJ1 636 aa5.6□□□□□ -1.51
ECHDC1-221ENST00000531582 MYO1CO00159 1063 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 CPP00450 1065 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 CCDC159P0C7I6 412 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 KCNA2P16389 499 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 COL8A1P27658 744 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 MCM4P33991 863 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 MAGEA9P43362 315 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 DCTN1Q14203 1278 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 NOLC1Q14978 699 aaKnown RBP eCLIP5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 EXOSC6Q5RKV6 272 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 HS2ST1Q7LGA3 356 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 RELL1Q8IUW5 271 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 TCP11Q8WWU5 503 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 PDLIM2Q96JY6 352 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 CRACR2AQ9BSW2 395 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 RSRP1Q9BUV0 290 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 TRIM7Q9C029 511 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 RNF208Q9H0X6 261 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 SPATS2LQ9NUQ6 558 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 GNL3LQ9NVN8 582 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 USP21Q9UK80 565 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 BLOC1S6Q9UL45 172 aa5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.59□□□□□ -1.51
ECHDC1-221ENST00000531582 SPAG9O60271 1321 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 SHTN1A0MZ66 631 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 FAM229AH3BQW9 127 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 ENC1O14682 589 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 TM4SF5O14894 197 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 CTIFO43310 598 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 PEX14O75381 377 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 ERLIN1O75477 346 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 SMC2O95347 1197 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 GSTP1P09211 210 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 MYBL2P10244 700 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 HARSP12081 509 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 BDNFP23560 247 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 STIP1P31948 543 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 HNRNPH2P55795 449 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 NLRP12P59046 1061 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 RASSF7Q02833 373 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 GRIK4Q16099 956 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 CCDC178Q5BJE1 867 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 TEX35Q5T0J7 233 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 MFSD4BQ5TF39 518 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 MMS22LQ6ZRQ5 1243 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 SDCCAG8Q86SQ7 713 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 SULF2Q8IWU5 870 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 TMEM151AQ8N4L1 468 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 IQUBQ8NA54 791 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 RNF34Q969K3 372 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 DCAF5Q96JK2 942 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 RUSC1Q9BVN2 902 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 CEP41Q9BYV8 373 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 RWDD1Q9H446 243 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 CYP4F12Q9HCS2 524 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 IGSF5Q9NSI5 407 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 FAM53CQ9NYF3 392 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 TMOD4Q9NZQ9 345 aa5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 V9GYY5 206 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-221ENST00000531582 CC2D2AQ9P2K1 1620 aa5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 TRIM37O94972 964 aa5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 SELPP16109 830 aa5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 MAOBP27338 520 aa5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 ZNF76P36508 570 aa5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 ZNF157P51786 506 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 DEUP1Q05D60 604 aa5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 CCDC15Q0P6D6 951 aa5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 GPS2Q13227 327 aa5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 ACBD5Q5T8D3 534 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 MEI1Q5TIA1 1274 aa5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 ANKRD34AQ69YU3 496 aa5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 TTBK2Q6IQ55 1244 aa5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 NFXL1Q6ZNB6 911 aa5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 ACAD11Q709F0 780 aa5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 PMFBP1Q8TBY8 1022 aa5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 MIPOL1Q8TD10 442 aa5.57□□□□□ -1.52
ECHDC1-221ENST00000531582 DNAAF4Q8WXU2 420 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms