RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 TAF6LQ9Y6J9 622 aa17.43■□□□□ 0.38
SRPRA-204ENST00000530680 A0A0G2JLL6 359 aaPredicted RBP17.42■□□□□ 0.38
SRPRA-204ENST00000530680 IFIT3O14879 490 aaKnown RBP17.42■□□□□ 0.38
SRPRA-204ENST00000530680 NMT2O60551 498 aa17.42■□□□□ 0.38
SRPRA-204ENST00000530680 INHBEP58166 350 aa17.42■□□□□ 0.38
SRPRA-204ENST00000530680 PABPC4Q13310 644 aaKnown RBP eCLIP17.42■□□□□ 0.38
SRPRA-204ENST00000530680 PKN2Q16513 984 aaKnown RBP17.42■□□□□ 0.38
SRPRA-204ENST00000530680 PRRT2Q7Z6L0 340 aaPredicted RBP17.42■□□□□ 0.38
SRPRA-204ENST00000530680 LRRC47Q8N1G4 583 aaKnown RBP17.42■□□□□ 0.38
SRPRA-204ENST00000530680 ACER1Q8TDN7 264 aa17.42■□□□□ 0.38
SRPRA-204ENST00000530680 ZSCAN10Q96SZ4 725 aaPredicted RBP17.42■□□□□ 0.38
SRPRA-204ENST00000530680 KAT14Q9H8E8 782 aa17.42■□□□□ 0.38
SRPRA-204ENST00000530680 NYAP2Q9P242 653 aa17.42■□□□□ 0.38
SRPRA-204ENST00000530680 MTMR7Q9Y216 660 aa17.42■□□□□ 0.38
SRPRA-204ENST00000530680 SNX14Q9Y5W7 946 aa17.42■□□□□ 0.38
SRPRA-204ENST00000530680 TNKSO95271 1327 aa17.42■□□□□ 0.38
SRPRA-204ENST00000530680 IGKV6D-41A0A0C4DH26 115 aa17.41■□□□□ 0.38
SRPRA-204ENST00000530680 PRC1O43663 620 aa17.41■□□□□ 0.38
SRPRA-204ENST00000530680 CASTP20810 708 aaKnown RBP17.41■□□□□ 0.38
SRPRA-204ENST00000530680 WTAPQ15007 396 aa17.41■□□□□ 0.38
SRPRA-204ENST00000530680 TMEM67Q5HYA8 995 aa17.41■□□□□ 0.38
SRPRA-204ENST00000530680 IFIT1BQ5T764 474 aaKnown RBP17.41■□□□□ 0.38
SRPRA-204ENST00000530680 BLOC1S2Q6QNY1 142 aa17.41■□□□□ 0.38
SRPRA-204ENST00000530680 RASEFQ8IZ41 740 aa17.41■□□□□ 0.38
SRPRA-204ENST00000530680 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.41■□□□□ 0.38
SRPRA-204ENST00000530680 KIAA1683Q9H0B3 1180 aa17.41■□□□□ 0.38
SRPRA-204ENST00000530680 TCP11L1Q9NUJ3 509 aa17.41■□□□□ 0.38
SRPRA-204ENST00000530680 ZSWIM5Q9P217 1185 aa17.41■□□□□ 0.38
SRPRA-204ENST00000530680 SEC24BO95487 1268 aa17.4■□□□□ 0.38
SRPRA-204ENST00000530680 TOP1P11387 765 aaKnown RBP17.4■□□□□ 0.38
SRPRA-204ENST00000530680 NFXL1Q6ZNB6 911 aa17.4■□□□□ 0.38
SRPRA-204ENST00000530680 CYB5R4Q7L1T6 521 aa17.4■□□□□ 0.38
SRPRA-204ENST00000530680 CHST3Q7LGC8 479 aa17.4■□□□□ 0.38
SRPRA-204ENST00000530680 MB21D2Q8IYB1 491 aaPredicted RBP17.4■□□□□ 0.38
SRPRA-204ENST00000530680 PROCA1Q8NCQ7 364 aaPredicted RBP17.4■□□□□ 0.38
SRPRA-204ENST00000530680 ZNF296Q8WUU4 475 aaPredicted RBP17.4■□□□□ 0.38
SRPRA-204ENST00000530680 LPAR1Q92633 364 aa17.4■□□□□ 0.38
SRPRA-204ENST00000530680 TANGO6Q9C0B7 1094 aa17.4■□□□□ 0.38
SRPRA-204ENST00000530680 PNMA3Q9UL41 463 aa17.4■□□□□ 0.38
SRPRA-204ENST00000530680 TMX2Q9Y320 296 aa17.4■□□□□ 0.38
SRPRA-204ENST00000530680 ANAPC15P60006 121 aa17.39■□□□□ 0.37
SRPRA-204ENST00000530680 IRX3P78415 501 aaPredicted RBP17.39■□□□□ 0.37
SRPRA-204ENST00000530680 TSGA10IPQ3SY00 556 aa17.39■□□□□ 0.37
SRPRA-204ENST00000530680 SPICE1Q8N0Z3 855 aa17.39■□□□□ 0.37
SRPRA-204ENST00000530680 BRI3BPQ8WY22 251 aa17.39■□□□□ 0.37
SRPRA-204ENST00000530680 TTC14Q96N46 770 aa17.39■□□□□ 0.37
SRPRA-204ENST00000530680 C22orf23Q9BZE7 217 aa17.39■□□□□ 0.37
SRPRA-204ENST00000530680 VCPKMTQ9H867 229 aa17.39■□□□□ 0.37
SRPRA-204ENST00000530680 IL17RBQ9NRM6 502 aa17.39■□□□□ 0.37
SRPRA-204ENST00000530680 SYNPO2Q9UMS6 1093 aa17.39■□□□□ 0.37
SRPRA-204ENST00000530680 AGTPBP1Q9UPW5 1226 aa17.39■□□□□ 0.37
SRPRA-204ENST00000530680 A0A1W2PRG0 241 aa17.38■□□□□ 0.37
SRPRA-204ENST00000530680 CCDC69A6NI79 296 aa17.38■□□□□ 0.37
SRPRA-204ENST00000530680 TBC1D8O95759 1140 aa17.38■□□□□ 0.37
SRPRA-204ENST00000530680 ALDH1A1P00352 501 aa17.38■□□□□ 0.37
SRPRA-204ENST00000530680 IKQ13123 557 aaPredicted RBP17.38■□□□□ 0.37
SRPRA-204ENST00000530680 CCDC96Q2M329 555 aa17.38■□□□□ 0.37
SRPRA-204ENST00000530680 ADCK5Q3MIX3 580 aa17.38■□□□□ 0.37
SRPRA-204ENST00000530680 SAMD1Q6SPF0 538 aaPredicted RBP17.38■□□□□ 0.37
SRPRA-204ENST00000530680 DGKHQ86XP1 1220 aa17.38■□□□□ 0.37
SRPRA-204ENST00000530680 IFNL1Q8IU54 200 aa17.38■□□□□ 0.37
SRPRA-204ENST00000530680 ENAHQ8N8S7 591 aaPredicted RBP17.38■□□□□ 0.37
SRPRA-204ENST00000530680 MS4A4AQ96JQ5 239 aa17.38■□□□□ 0.37
SRPRA-204ENST00000530680 TMEM87BQ96K49 555 aa17.38■□□□□ 0.37
SRPRA-204ENST00000530680 CYP46A1Q9Y6A2 500 aa17.38■□□□□ 0.37
SRPRA-204ENST00000530680 PDHXO00330 501 aa17.37■□□□□ 0.37
SRPRA-204ENST00000530680 WDR46O15213 610 aaKnown RBP17.37■□□□□ 0.37
SRPRA-204ENST00000530680 VCAM1P19320 739 aa17.37■□□□□ 0.37
SRPRA-204ENST00000530680 OSBPP22059 807 aa17.37■□□□□ 0.37
SRPRA-204ENST00000530680 TAF1CQ15572 869 aaPredicted RBP17.37■□□□□ 0.37
SRPRA-204ENST00000530680 SH3D19Q5HYK7 790 aa17.37■□□□□ 0.37
SRPRA-204ENST00000530680 SLFN13Q68D06 897 aa17.37■□□□□ 0.37
SRPRA-204ENST00000530680 DHX32Q7L7V1 743 aaKnown RBP17.37■□□□□ 0.37
SRPRA-204ENST00000530680 ANKRD23Q86SG2 305 aa17.37■□□□□ 0.37
SRPRA-204ENST00000530680 SMCR8Q8TEV9 937 aaPredicted RBP17.37■□□□□ 0.37
SRPRA-204ENST00000530680 KCNB2Q92953 911 aa17.37■□□□□ 0.37
SRPRA-204ENST00000530680 CHMP4CQ96CF2 233 aa17.37■□□□□ 0.37
SRPRA-204ENST00000530680 PARK7Q99497 189 aaKnown RBP17.37■□□□□ 0.37
SRPRA-204ENST00000530680 TMEM47Q9BQJ4 181 aa17.37■□□□□ 0.37
SRPRA-204ENST00000530680 RPAP3Q9H6T3 665 aaPredicted RBP17.37■□□□□ 0.37
SRPRA-204ENST00000530680 NAP1L2Q9ULW6 460 aaPredicted RBP17.37■□□□□ 0.37
SRPRA-204ENST00000530680 WDR19Q8NEZ3 1342 aa17.37■□□□□ 0.37
SRPRA-204ENST00000530680 BTBD19C9JJ37 291 aa17.36■□□□□ 0.37
SRPRA-204ENST00000530680 F5H6K3 240 aa17.36■□□□□ 0.37
SRPRA-204ENST00000530680 SLC1A4P43007 532 aa17.36■□□□□ 0.37
SRPRA-204ENST00000530680 TM4SF4P48230 202 aa17.36■□□□□ 0.37
SRPRA-204ENST00000530680 KLRC3Q07444 240 aa17.36■□□□□ 0.37
SRPRA-204ENST00000530680 TREML2Q5T2D2 321 aa17.36■□□□□ 0.37
SRPRA-204ENST00000530680 SYNE3Q6ZMZ3 975 aa17.36■□□□□ 0.37
SRPRA-204ENST00000530680 CATIPQ7Z7H3 387 aa17.36■□□□□ 0.37
SRPRA-204ENST00000530680 PNMA1Q8ND90 353 aa17.36■□□□□ 0.37
SRPRA-204ENST00000530680 GMCL1P1Q8NEA9 526 aa17.36■□□□□ 0.37
SRPRA-204ENST00000530680 MKL1Q969V6 931 aa17.36■□□□□ 0.37
SRPRA-204ENST00000530680 C12orf42Q96LP6 360 aa17.36■□□□□ 0.37
SRPRA-204ENST00000530680 MTA3Q9BTC8 594 aa17.36■□□□□ 0.37
SRPRA-204ENST00000530680 LRRC2Q9BYS8 371 aa17.36■□□□□ 0.37
SRPRA-204ENST00000530680 BACH2Q9BYV9 841 aa17.36■□□□□ 0.37
SRPRA-204ENST00000530680 ZCCHC17Q9NP64 241 aaKnown RBP17.36■□□□□ 0.37
SRPRA-204ENST00000530680 EMILIN3Q9NT22 766 aa17.36■□□□□ 0.37
SRPRA-204ENST00000530680 TESPA1A2RU30 521 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms