RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 SLC4A8Q2Y0W8 1093 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 CCDC178Q5BJE1 867 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 SH3D19Q5HYK7 790 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 RALYLQ86SE5 291 aaKnown RBP5.66□□□□□ -1.5
SSBP3-213ENST00000530618 SLAIN1Q8ND83 568 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 PXYLP1Q8TE99 480 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 SH3RF3Q8TEJ3 882 aaPredicted RBP5.66□□□□□ -1.5
SSBP3-213ENST00000530618 DIS3LQ8TF46 1054 aaKnown RBP5.66□□□□□ -1.5
SSBP3-213ENST00000530618 TGFBRAP1Q8WUH2 860 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 OSBP2Q969R2 916 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 CHMP4CQ96CF2 233 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 FAM227BQ96M60 508 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 STRBPQ96SI9 672 aaKnown RBP5.66□□□□□ -1.5
SSBP3-213ENST00000530618 OSBPL5Q9H0X9 879 aaPredicted RBP5.66□□□□□ -1.5
SSBP3-213ENST00000530618 ARMT1Q9H993 441 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 MKNK2Q9HBH9 465 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 PI4KBQ9UBF8 816 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 HERC5Q9UII4 1024 aaKnown RBP5.66□□□□□ -1.5
SSBP3-213ENST00000530618 AGTPBP1Q9UPW5 1226 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 CHD9Q3L8U1 2897 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 A0A0D9SFI3 127 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 TRIM75PA6NK02 468 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 ADCY3O60266 1144 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 FMNL1O95466 1100 aaPredicted RBP5.65□□□□□ -1.5
SSBP3-213ENST00000530618 IGHA2P01877 340 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 HSPD1P10809 573 aaKnown RBP5.65□□□□□ -1.5
SSBP3-213ENST00000530618 CAP2P40123 477 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 CLCN6P51797 869 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 FCGRTP55899 365 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 FGD1P98174 961 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 KIF22Q14807 665 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 ALX1Q15699 326 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 FAM110CQ1W6H9 321 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 MAP3K21Q5TCX8 1036 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 GADL1Q6ZQY3 521 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 FASTKD5Q7L8L6 764 aaKnown RBP5.65□□□□□ -1.5
SSBP3-213ENST00000530618 IQCA1Q86XH1 822 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 MAPKAPK5Q8IW41 473 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 ZNF444Q8N0Y2 327 aaPredicted RBP5.65□□□□□ -1.5
SSBP3-213ENST00000530618 LCORLQ8N3X6 602 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 PROCA1Q8NCQ7 364 aaPredicted RBP5.65□□□□□ -1.5
SSBP3-213ENST00000530618 RAET1EQ8TD07 263 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 USP6NLQ92738 828 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 WDR18Q9BV38 432 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 TBC1D2Q9BYX2 928 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 KRT23Q9C075 422 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 PUS7LQ9H0K6 701 aaKnown RBP5.65□□□□□ -1.5
SSBP3-213ENST00000530618 ASCC2Q9H1I8 757 aaPredicted RBP5.65□□□□□ -1.5
SSBP3-213ENST00000530618 TXNRD2Q9NNW7 524 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 CABP5Q9NP86 173 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 TOMM22Q9NS69 142 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 GINM1Q9NU53 330 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 MORF4L1Q9UBU8 362 aa5.65□□□□□ -1.5
SSBP3-213ENST00000530618 MCM3APO60318 1980 aa5.65□□□□□ -1.51
SSBP3-213ENST00000530618 CHD7Q9P2D1 2997 aa5.65□□□□□ -1.51
SSBP3-213ENST00000530618 FLT1P17948 1338 aa5.65□□□□□ -1.51
SSBP3-213ENST00000530618 MINDY4BA8MYZ0 360 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 M0R2C6 588 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 CNMDO75829 334 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 FARP2O94887 1054 aaPredicted RBP5.64□□□□□ -1.51
SSBP3-213ENST00000530618 HMGCS2P54868 508 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 ANAPC15P60006 121 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 SPP2Q13103 211 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 ANKRD1Q15327 319 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 SBK1Q52WX2 424 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 MFSD6Q6ZSS7 791 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 FOXP4Q8IVH2 680 aaPredicted RBP5.64□□□□□ -1.51
SSBP3-213ENST00000530618 IFNL3Q8IZI9 196 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 ANKRD13CQ8N6S4 541 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 ZNF280CQ8ND82 737 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 SDR42E1Q8WUS8 393 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 TRIB2Q92519 343 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 ESR2Q92731 530 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 CCDC17Q96LX7 622 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 GDF15Q99988 308 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 RIOK1Q9BRS2 568 aaKnown RBP5.64□□□□□ -1.51
SSBP3-213ENST00000530618 UBAC1Q9BSL1 405 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 RNF208Q9H0X6 261 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 EHD4Q9H223 541 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 SH2D4AQ9H788 454 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.64□□□□□ -1.51
SSBP3-213ENST00000530618 DCP1AQ9NPI6 582 aaPredicted RBP5.64□□□□□ -1.51
SSBP3-213ENST00000530618 PICK1Q9NRD5 415 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 SERPINB13Q9UIV8 391 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 PFASO15067 1338 aa5.64□□□□□ -1.51
SSBP3-213ENST00000530618 TSPY2A6NKD2 308 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 USP17L12C9JPN9 530 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 USP17L21D6R901 530 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 TNPO2O14787 897 aaKnown RBP5.63□□□□□ -1.51
SSBP3-213ENST00000530618 ST18O60284 1047 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 TSPY3P0CV98 308 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 TSPY8P0CW00 308 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 COL6A1P12109 1028 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 HOXD10P28358 340 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 HOXA7P31268 230 aaPredicted RBP5.63□□□□□ -1.51
SSBP3-213ENST00000530618 GUCY1A2P33402 732 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 BACE1P56817 501 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 DYNLL1P63167 89 aaKnown RBP5.63□□□□□ -1.51
SSBP3-213ENST00000530618 UBXN2AP68543 259 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 PPARAQ07869 468 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms