RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 PANK1Q8TE04 598 aa18.08■□□□□ 0.48
CAPN1-219ENST00000530495 MOV10L1Q9BXT6 1211 aaKnown RBP18.08■□□□□ 0.48
CAPN1-219ENST00000530495 DCP1AQ9NPI6 582 aaPredicted RBP18.08■□□□□ 0.48
CAPN1-219ENST00000530495 STXBP5LQ9Y2K9 1186 aa18.08■□□□□ 0.48
CAPN1-219ENST00000530495 DNAH12Q6ZR08 3092 aa18.07■□□□□ 0.48
CAPN1-219ENST00000530495 ZNF236Q9UL36 1845 aa18.07■□□□□ 0.48
CAPN1-219ENST00000530495 DNM1LO00429 736 aa18.07■□□□□ 0.48
CAPN1-219ENST00000530495 MPHOSPH10O00566 681 aaKnown RBP18.07■□□□□ 0.48
CAPN1-219ENST00000530495 CYBAP13498 195 aa18.07■□□□□ 0.48
CAPN1-219ENST00000530495 OLFML2BQ68BL8 750 aa18.07■□□□□ 0.48
CAPN1-219ENST00000530495 TMEM179Q6ZVK1 233 aa18.07■□□□□ 0.48
CAPN1-219ENST00000530495 SDR42E1Q8WUS8 393 aa18.07■□□□□ 0.48
CAPN1-219ENST00000530495 GOLIM4O00461 696 aa18.06■□□□□ 0.48
CAPN1-219ENST00000530495 ADORA2AP29274 412 aa18.06■□□□□ 0.48
CAPN1-219ENST00000530495 KIAA1755Q5JYT7 1200 aa18.06■□□□□ 0.48
CAPN1-219ENST00000530495 SIAH1Q8IUQ4 282 aa18.06■□□□□ 0.48
CAPN1-219ENST00000530495 RPAP2Q8IXW5 612 aaPredicted RBP18.06■□□□□ 0.48
CAPN1-219ENST00000530495 LCORLQ8N3X6 602 aa18.06■□□□□ 0.48
CAPN1-219ENST00000530495 MB21D1Q8N884 522 aa18.06■□□□□ 0.48
CAPN1-219ENST00000530495 KIF1BPQ96EK5 621 aa18.06■□□□□ 0.48
CAPN1-219ENST00000530495 TANGO6Q9C0B7 1094 aa18.06■□□□□ 0.48
CAPN1-219ENST00000530495 SPATC1LQ9H0A9 340 aa18.06■□□□□ 0.48
CAPN1-219ENST00000530495 SWAP70Q9UH65 585 aa18.06■□□□□ 0.48
CAPN1-219ENST00000530495 ERCC3P19447 782 aa18.05■□□□□ 0.48
CAPN1-219ENST00000530495 DSG3P32926 999 aa18.05■□□□□ 0.48
CAPN1-219ENST00000530495 ARRDC4Q8NCT1 418 aa18.05■□□□□ 0.48
CAPN1-219ENST00000530495 DNAJC2Q99543 621 aaKnown RBP18.05■□□□□ 0.48
CAPN1-219ENST00000530495 LBHD1Q9BQE6 289 aaPredicted RBP18.05■□□□□ 0.48
CAPN1-219ENST00000530495 MROH8Q9H579 483 aa18.05■□□□□ 0.48
CAPN1-219ENST00000530495 A0A0G2JMZ2 1700 aa18.05■□□□□ 0.48
CAPN1-219ENST00000530495 MYH8P13535 1937 aa18.04■□□□□ 0.48
CAPN1-219ENST00000530495 COBLO75128 1261 aa18.04■□□□□ 0.48
CAPN1-219ENST00000530495 IFIT2P09913 472 aaKnown RBP18.04■□□□□ 0.48
CAPN1-219ENST00000530495 CYP2D6P10635 497 aa18.04■□□□□ 0.48
CAPN1-219ENST00000530495 ATN1P54259 1190 aaPredicted RBP18.04■□□□□ 0.48
CAPN1-219ENST00000530495 ABRAQ8N0Z2 381 aa18.04■□□□□ 0.48
CAPN1-219ENST00000530495 SLC44A5Q8NCS7 719 aa18.04■□□□□ 0.48
CAPN1-219ENST00000530495 DYNLL2Q96FJ2 89 aa18.04■□□□□ 0.48
CAPN1-219ENST00000530495 ATP8A2Q9NTI2 1148 aa18.04■□□□□ 0.48
CAPN1-219ENST00000530495 SLC5A4Q9NY91 659 aa18.04■□□□□ 0.48
CAPN1-219ENST00000530495 TMX2Q9Y320 296 aa18.04■□□□□ 0.48
CAPN1-219ENST00000530495 ZNFX1Q9P2E3 1918 aaKnown RBP18.04■□□□□ 0.48
CAPN1-219ENST00000530495 POTEB2H3BUK9 544 aa18.03■□□□□ 0.48
CAPN1-219ENST00000530495 APBB1O00213 710 aa18.03■□□□□ 0.48
CAPN1-219ENST00000530495 SEPT4O43236 478 aa18.03■□□□□ 0.48
CAPN1-219ENST00000530495 MS4A1P11836 297 aa18.03■□□□□ 0.48
CAPN1-219ENST00000530495 GJC2Q5T442 439 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-219ENST00000530495 FAM109BQ6ICB4 259 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-219ENST00000530495 SIRT2Q8IXJ6 389 aa18.03■□□□□ 0.48
CAPN1-219ENST00000530495 CCDC17Q96LX7 622 aa18.03■□□□□ 0.48
CAPN1-219ENST00000530495 ARMT1Q9H993 441 aa18.03■□□□□ 0.48
CAPN1-219ENST00000530495 ARHGEF10LQ9HCE6 1279 aa18.03■□□□□ 0.48
CAPN1-219ENST00000530495 PRKAB2O43741 272 aa18.02■□□□□ 0.48
CAPN1-219ENST00000530495 RAB11FIP3O75154 756 aa18.02■□□□□ 0.48
CAPN1-219ENST00000530495 AKR1B1P15121 316 aa18.02■□□□□ 0.48
CAPN1-219ENST00000530495 ADD2P35612 726 aa18.02■□□□□ 0.48
CAPN1-219ENST00000530495 RTP1P59025 263 aa18.02■□□□□ 0.48
CAPN1-219ENST00000530495 SLC39A5Q6ZMH5 540 aa18.02■□□□□ 0.48
CAPN1-219ENST00000530495 SH2D4AQ9H788 454 aa18.02■□□□□ 0.48
CAPN1-219ENST00000530495 VCPKMTQ9H867 229 aa18.02■□□□□ 0.48
CAPN1-219ENST00000530495 PAG1Q9NWQ8 432 aa18.02■□□□□ 0.48
CAPN1-219ENST00000530495 PRKAG2Q9UGJ0 569 aa18.02■□□□□ 0.48
CAPN1-219ENST00000530495 ADAMTS5Q9UNA0 930 aa18.02■□□□□ 0.48
CAPN1-219ENST00000530495 PARP14Q460N5 1801 aa18.02■□□□□ 0.47
CAPN1-219ENST00000530495 BAZ2AQ9UIF9 1905 aaKnown RBP18.02■□□□□ 0.47
CAPN1-219ENST00000530495 HMMRO75330 724 aa18.01■□□□□ 0.47
CAPN1-219ENST00000530495 FLOT1O75955 427 aa18.01■□□□□ 0.47
CAPN1-219ENST00000530495 ATP5JP18859 108 aa18.01■□□□□ 0.47
CAPN1-219ENST00000530495 PLS1Q14651 629 aa18.01■□□□□ 0.47
CAPN1-219ENST00000530495 C12orf60Q5U649 245 aa18.01■□□□□ 0.47
CAPN1-219ENST00000530495 NCAPG2Q86XI2 1143 aa18.01■□□□□ 0.47
CAPN1-219ENST00000530495 SPICE1Q8N0Z3 855 aa18.01■□□□□ 0.47
CAPN1-219ENST00000530495 ATG4CQ96DT6 458 aa18.01■□□□□ 0.47
CAPN1-219ENST00000530495 ZBTB40Q9NUA8 1239 aa18.01■□□□□ 0.47
CAPN1-219ENST00000530495 LTBP2Q14767 1821 aa18■□□□□ 0.47
CAPN1-219ENST00000530495 A0A0C4DFX4 3053 aa18■□□□□ 0.47
CAPN1-219ENST00000530495 KBTBD13C9JR72 458 aa18■□□□□ 0.47
CAPN1-219ENST00000530495 WDR46O15213 610 aaKnown RBP18■□□□□ 0.47
CAPN1-219ENST00000530495 MBD4O95243 580 aa18■□□□□ 0.47
CAPN1-219ENST00000530495 FCER1AP12319 257 aa18■□□□□ 0.47
CAPN1-219ENST00000530495 CDK8P49336 464 aa18■□□□□ 0.47
CAPN1-219ENST00000530495 ICA1Q05084 483 aa18■□□□□ 0.47
CAPN1-219ENST00000530495 SNX17Q15036 470 aa18■□□□□ 0.47
CAPN1-219ENST00000530495 SLFNL1Q499Z3 407 aa18■□□□□ 0.47
CAPN1-219ENST00000530495 PRAMEF19Q5SWL8 479 aa18■□□□□ 0.47
CAPN1-219ENST00000530495 CLEC10AQ8IUN9 316 aa18■□□□□ 0.47
CAPN1-219ENST00000530495 MAML3Q96JK9 1138 aa18■□□□□ 0.47
CAPN1-219ENST00000530495 DDX24Q9GZR7 859 aaKnown RBP eCLIP18■□□□□ 0.474e-6■■■□□ 17.6
CAPN1-219ENST00000530495 BOLA2Q9H3K6 86 aa18■□□□□ 0.47
CAPN1-219ENST00000530495 USP17L12C9JPN9 530 aa17.99■□□□□ 0.47
CAPN1-219ENST00000530495 USP17L21D6R901 530 aa17.99■□□□□ 0.47
CAPN1-219ENST00000530495 SLC25A27O95847 323 aa17.99■□□□□ 0.47
CAPN1-219ENST00000530495 TMEM132BQ14DG7 1078 aa17.99■□□□□ 0.47
CAPN1-219ENST00000530495 ANO1Q5XXA6 986 aa17.99■□□□□ 0.47
CAPN1-219ENST00000530495 MIER1Q8N108 512 aa17.99■□□□□ 0.47
CAPN1-219ENST00000530495 HAUS7Q99871 368 aa17.99■□□□□ 0.47
CAPN1-219ENST00000530495 DDX19BQ9UMR2 479 aa17.99■□□□□ 0.47
CAPN1-219ENST00000530495 ATP11BQ9Y2G3 1177 aa17.99■□□□□ 0.47
CAPN1-219ENST00000530495 COL11A1P12107 1806 aaPredicted RBP17.99■□□□□ 0.47
CAPN1-219ENST00000530495 SMCHD1A6NHR9 2005 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms