RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 CTNND1O60716 968 aaKnown RBP12.46□□□□□ -0.42
SOX6-213ENST00000530378 GOLGA8HP0CJ92 632 aa12.46□□□□□ -0.42
SOX6-213ENST00000530378 MCM2P49736 904 aa12.46□□□□□ -0.42
SOX6-213ENST00000530378 METAP2P50579 478 aaKnown RBP eCLIP12.46□□□□□ -0.42
SOX6-213ENST00000530378 SCRN1Q12765 414 aa12.46□□□□□ -0.42
SOX6-213ENST00000530378 CATIPQ7Z7H3 387 aa12.46□□□□□ -0.42
SOX6-213ENST00000530378 SIAH1Q8IUQ4 282 aa12.46□□□□□ -0.42
SOX6-213ENST00000530378 SCYL3Q8IZE3 742 aa12.46□□□□□ -0.42
SOX6-213ENST00000530378 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.46□□□□□ -0.42
SOX6-213ENST00000530378 IPO9Q96P70 1041 aaKnown RBP12.46□□□□□ -0.42
SOX6-213ENST00000530378 KANSL2Q9H9L4 492 aa12.46□□□□□ -0.42
SOX6-213ENST00000530378 ELP3Q9H9T3 547 aa12.46□□□□□ -0.42
SOX6-213ENST00000530378 PICK1Q9NRD5 415 aa12.46□□□□□ -0.42
SOX6-213ENST00000530378 FRMPD2Q68DX3 1309 aaPredicted RBP12.45□□□□□ -0.42
SOX6-213ENST00000530378 ASNSP08243 561 aa12.45□□□□□ -0.42
SOX6-213ENST00000530378 TOP1P11387 765 aaKnown RBP12.45□□□□□ -0.42
SOX6-213ENST00000530378 CDC27P30260 824 aa12.45□□□□□ -0.42
SOX6-213ENST00000530378 IREB2P48200 963 aaKnown RBP12.45□□□□□ -0.42
SOX6-213ENST00000530378 SYNE3Q6ZMZ3 975 aa12.45□□□□□ -0.42
SOX6-213ENST00000530378 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.45□□□□□ -0.42
SOX6-213ENST00000530378 DGKHQ86XP1 1220 aa12.45□□□□□ -0.42
SOX6-213ENST00000530378 SPICE1Q8N0Z3 855 aa12.45□□□□□ -0.42
SOX6-213ENST00000530378 CCDC82Q8N4S0 544 aa12.45□□□□□ -0.42
SOX6-213ENST00000530378 GTF3C6Q969F1 213 aa12.45□□□□□ -0.42
SOX6-213ENST00000530378 CPVLQ9H3G5 476 aa12.45□□□□□ -0.42
SOX6-213ENST00000530378 ZNF112Q9UJU3 913 aa12.45□□□□□ -0.42
SOX6-213ENST00000530378 PTPRFP10586 1907 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 TRIM75PA6NK02 468 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 USP17L5A8MUK1 530 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 PFKFB2O60825 505 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 APLP1P51693 650 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 CCDC178Q5BJE1 867 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 FBXL16Q8N461 479 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 PIBF1Q8WXW3 757 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 ZSCAN31Q96LW9 406 aaPredicted RBP12.44□□□□□ -0.42
SOX6-213ENST00000530378 NUP88Q99567 741 aaPredicted RBP12.44□□□□□ -0.42
SOX6-213ENST00000530378 FEZ1Q99689 392 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 CSADQ9Y600 493 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 SNCAIPQ9Y6H5 919 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 JAK2O60674 1132 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 PLEKHA8P1O95397 391 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 ITGBL1O95965 494 aaPredicted RBP12.44□□□□□ -0.42
SOX6-213ENST00000530378 ADD1P35611 737 aaKnown RBP12.44□□□□□ -0.42
SOX6-213ENST00000530378 FOSBP53539 338 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 MAP3K9P80192 1104 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 TROAPQ12815 778 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 RTN1Q16799 776 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 CCDC96Q2M329 555 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 KIAA1755Q5JYT7 1200 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 USP17L2Q6R6M4 530 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 DDX11Q96FC9 970 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 ZNF274Q96GC6 653 aaPredicted RBP12.44□□□□□ -0.42
SOX6-213ENST00000530378 MTA3Q9BTC8 594 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 ARHGEF10LQ9HCE6 1279 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 SH2B1Q9NRF2 756 aaPredicted RBP12.44□□□□□ -0.42
SOX6-213ENST00000530378 ZHX2Q9Y6X8 837 aa12.44□□□□□ -0.42
SOX6-213ENST00000530378 PTPRAP18433 802 aa12.43□□□□□ -0.42
SOX6-213ENST00000530378 EVCP57679 992 aa12.43□□□□□ -0.42
SOX6-213ENST00000530378 MKRN3Q13064 507 aaKnown RBP12.43□□□□□ -0.42
SOX6-213ENST00000530378 MTMR2Q13614 643 aa12.43□□□□□ -0.42
SOX6-213ENST00000530378 KCTD1Q719H9 257 aa12.43□□□□□ -0.42
SOX6-213ENST00000530378 ARMC9Q7Z3E5 817 aa12.43□□□□□ -0.42
SOX6-213ENST00000530378 TMTC2Q8N394 836 aa12.43□□□□□ -0.42
SOX6-213ENST00000530378 STAG2Q8N3U4 1231 aa12.43□□□□□ -0.42
SOX6-213ENST00000530378 ANKS1AQ92625 1134 aa12.43□□□□□ -0.42
SOX6-213ENST00000530378 OTUD5Q96G74 571 aa12.43□□□□□ -0.42
SOX6-213ENST00000530378 GBA2Q9HCG7 927 aaPredicted RBP12.43□□□□□ -0.42
SOX6-213ENST00000530378 GPCPD1Q9NPB8 672 aa12.43□□□□□ -0.42
SOX6-213ENST00000530378 NYAP2Q9P242 653 aa12.43□□□□□ -0.42
SOX6-213ENST00000530378 hCG_1642624A0A1W2PR95 340 aa12.42□□□□□ -0.42
SOX6-213ENST00000530378 CPLX1O14810 134 aa12.42□□□□□ -0.42
SOX6-213ENST00000530378 DDAH1O94760 285 aa12.42□□□□□ -0.42
SOX6-213ENST00000530378 SLC34A2O95436 690 aa12.42□□□□□ -0.42
SOX6-213ENST00000530378 NT5C2P49902 561 aa12.42□□□□□ -0.42
SOX6-213ENST00000530378 SPP2Q13103 211 aa12.42□□□□□ -0.42
SOX6-213ENST00000530378 DNAJC5GQ8N7S2 189 aa12.42□□□□□ -0.42
SOX6-213ENST00000530378 FANCBQ8NB91 859 aa12.42□□□□□ -0.42
SOX6-213ENST00000530378 CTCFLQ8NI51 663 aaPredicted RBP12.42□□□□□ -0.42
SOX6-213ENST00000530378 PHKBQ93100 1093 aa12.42□□□□□ -0.42
SOX6-213ENST00000530378 FAM217BQ9NTX9 383 aaPredicted RBP12.42□□□□□ -0.42
SOX6-213ENST00000530378 CTDNEP1O95476 244 aa12.41□□□□□ -0.42
SOX6-213ENST00000530378 NDUFB10O96000 172 aa12.41□□□□□ -0.42
SOX6-213ENST00000530378 PDHBP11177 359 aa12.41□□□□□ -0.42
SOX6-213ENST00000530378 NOVP48745 357 aa12.41□□□□□ -0.42
SOX6-213ENST00000530378 COL13A1Q5TAT6 717 aaPredicted RBP12.41□□□□□ -0.42
SOX6-213ENST00000530378 CST9Q5W186 159 aa12.41□□□□□ -0.42
SOX6-213ENST00000530378 SLFN13Q68D06 897 aa12.41□□□□□ -0.42
SOX6-213ENST00000530378 ANKRD13AQ8IZ07 590 aa12.41□□□□□ -0.42
SOX6-213ENST00000530378 PTPDC1A2A3K4 754 aa12.41□□□□□ -0.42
SOX6-213ENST00000530378 F5H6K3 240 aa12.41□□□□□ -0.42
SOX6-213ENST00000530378 PARP1P09874 1014 aaKnown RBP12.41□□□□□ -0.42
SOX6-213ENST00000530378 KLRC3Q07444 240 aa12.41□□□□□ -0.42
SOX6-213ENST00000530378 CUL4AQ13619 759 aa12.41□□□□□ -0.42
SOX6-213ENST00000530378 GRM4Q14833 912 aa12.41□□□□□ -0.42
SOX6-213ENST00000530378 NOL9Q5SY16 702 aaKnown RBP12.41□□□□□ -0.42
SOX6-213ENST00000530378 TTBK2Q6IQ55 1244 aa12.41□□□□□ -0.42
SOX6-213ENST00000530378 NBPF11Q86T75 865 aa12.41□□□□□ -0.42
SOX6-213ENST00000530378 MAD2L2Q9UI95 211 aa12.41□□□□□ -0.42
SOX6-213ENST00000530378 DHX16O60231 1041 aaKnown RBP12.4□□□□□ -0.42
SOX6-213ENST00000530378 SLC16A2P36021 539 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms