RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 CACNB1Q02641 598 aaPredicted RBP13.9□□□□□ -0.18
SCN3B-206ENST00000530277 CTR9Q6PD62 1173 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 USP17L2Q6R6M4 530 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 SLC39A2Q9NP94 309 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 KLRF2D3W0D1 207 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 SMIM22K7EJ46 135 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 SPAG1Q07617 926 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 KIF5AQ12840 1032 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 DCAF17Q5H9S7 520 aaPredicted RBP13.9□□□□□ -0.18
SCN3B-206ENST00000530277 NYXQ9GZU5 481 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 VEZTQ9HBM0 779 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 RIPOR2Q9Y4F9 1068 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 UBN2Q6ZU65 1347 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 SMCO2A6NFE2 343 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 PP2D1A8MPX8 630 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 HLA-DOAP06340 250 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 CYP19A1P11511 503 aaPredicted RBP13.9□□□□□ -0.18
SCN3B-206ENST00000530277 SCG2P13521 617 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 RBM6P78332 1123 aaKnown RBP13.9□□□□□ -0.18
SCN3B-206ENST00000530277 TMEM132AQ24JP5 1023 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 ACRBPQ8NEB7 543 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 RBM28Q9NW13 759 aaKnown RBP13.9□□□□□ -0.18
SCN3B-206ENST00000530277 GSG1L2A8MUP6 293 aa13.9□□□□□ -0.19
SCN3B-206ENST00000530277 IFT81Q8WYA0 676 aa13.9□□□□□ -0.19
SCN3B-206ENST00000530277 EYA3Q99504 573 aa13.9□□□□□ -0.19
SCN3B-206ENST00000530277 USP42Q9H9J4 1324 aaKnown RBP13.89□□□□□ -0.19
SCN3B-206ENST00000530277 IFNAR1P17181 557 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 NCBP1Q09161 790 aaKnown RBP13.89□□□□□ -0.19
SCN3B-206ENST00000530277 CNGA4Q8IV77 575 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 LY9Q9HBG7 655 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 GOPCQ9HD26 462 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 LUC7LQ9NQ29 371 aaKnown RBP13.89□□□□□ -0.19
SCN3B-206ENST00000530277 TMOD2Q9NZR1 351 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 CWC15Q9P013 229 aaKnown RBP13.89□□□□□ -0.19
SCN3B-206ENST00000530277 IMPACTQ9P2X3 320 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 DIP2AQ14689 1571 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 CYLC1P35663 651 aaPredicted RBP13.89□□□□□ -0.19
SCN3B-206ENST00000530277 SLC16A2P36021 539 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 GSTO1P78417 241 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 DHX40Q8IX18 779 aaKnown RBP13.89□□□□□ -0.19
SCN3B-206ENST00000530277 ANKRD2Q9GZV1 360 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 GDAQ9Y2T3 454 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 FMNL1O95466 1100 aaPredicted RBP13.89□□□□□ -0.19
SCN3B-206ENST00000530277 CAPN2P17655 700 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 GYS2P54840 703 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 MECOMQ03112 1051 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 RAPGEF1Q13905 1077 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 BLIDQ8IZY5 108 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 SNX29Q8TEQ0 813 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 RSPH14Q9UHP6 348 aa13.89□□□□□ -0.19
SCN3B-206ENST00000530277 MTF1Q14872 753 aa13.88□□□□□ -0.19
SCN3B-206ENST00000530277 LRRC41Q15345 812 aa13.88□□□□□ -0.19
SCN3B-206ENST00000530277 KIAA0825Q8IV33 1275 aa13.88□□□□□ -0.19
SCN3B-206ENST00000530277 LRWD1Q9UFC0 647 aa13.88□□□□□ -0.19
SCN3B-206ENST00000530277 RBL2Q08999 1139 aa13.88□□□□□ -0.19
SCN3B-206ENST00000530277 IQCB1Q15051 598 aa13.88□□□□□ -0.19
SCN3B-206ENST00000530277 TYW1BQ6NUM6 668 aa13.88□□□□□ -0.19
SCN3B-206ENST00000530277 FBXO38Q6PIJ6 1188 aa13.88□□□□□ -0.19
SCN3B-206ENST00000530277 ZNF804BA4D1E1 1349 aa13.88□□□□□ -0.19
SCN3B-206ENST00000530277 TEX33O43247 280 aa13.88□□□□□ -0.19
SCN3B-206ENST00000530277 ATP2C2O75185 946 aa13.88□□□□□ -0.19
SCN3B-206ENST00000530277 GNA11P29992 359 aa13.88□□□□□ -0.19
SCN3B-206ENST00000530277 TBC1D10BQ4KMP7 808 aaPredicted RBP13.88□□□□□ -0.19
SCN3B-206ENST00000530277 CABP7Q86V35 215 aa13.88□□□□□ -0.19
SCN3B-206ENST00000530277 CACNB3P54284 484 aa13.87□□□□□ -0.19
SCN3B-206ENST00000530277 PLA2G4DQ86XP0 818 aa13.87□□□□□ -0.19
SCN3B-206ENST00000530277 SYCP3Q8IZU3 236 aa13.87□□□□□ -0.19
SCN3B-206ENST00000530277 NEK11Q8NG66 645 aa13.87□□□□□ -0.19
SCN3B-206ENST00000530277 SIGLEC1Q9BZZ2 1709 aa13.87□□□□□ -0.19
SCN3B-206ENST00000530277 C1orf167Q5SNV9 1468 aa13.87□□□□□ -0.19
SCN3B-206ENST00000530277 FAM196BA6NMK8 535 aa13.87□□□□□ -0.19
SCN3B-206ENST00000530277 KCNJ18B7U540 433 aa13.87□□□□□ -0.19
SCN3B-206ENST00000530277 KCNJ12Q14500 433 aa13.87□□□□□ -0.19
SCN3B-206ENST00000530277 FAM196AQ6ZSG2 479 aa13.87□□□□□ -0.19
SCN3B-206ENST00000530277 ENAHQ8N8S7 591 aaPredicted RBP13.87□□□□□ -0.19
SCN3B-206ENST00000530277 COA7Q96BR5 231 aa13.87□□□□□ -0.19
SCN3B-206ENST00000530277 ST7Q9NRC1 585 aa13.87□□□□□ -0.19
SCN3B-206ENST00000530277 GGA1Q9UJY5 639 aa13.87□□□□□ -0.19
SCN3B-206ENST00000530277 TRIM49BA6NDI0 452 aa13.87□□□□□ -0.19
SCN3B-206ENST00000530277 KRT86O43790 486 aa13.87□□□□□ -0.19
SCN3B-206ENST00000530277 TOM1O60784 492 aa13.87□□□□□ -0.19
SCN3B-206ENST00000530277 MORC3Q14149 939 aa13.87□□□□□ -0.19
SCN3B-206ENST00000530277 RIMS1Q86UR5 1692 aaKnown RBP13.86□□□□□ -0.19
SCN3B-206ENST00000530277 GOLGA6L10A6NI86 522 aa13.86□□□□□ -0.19
SCN3B-206ENST00000530277 CYP27A1Q02318 531 aa13.86□□□□□ -0.19
SCN3B-206ENST00000530277 HERC4Q5GLZ8 1057 aaPredicted RBP13.86□□□□□ -0.19
SCN3B-206ENST00000530277 ARMCX5Q6P1M9 558 aa13.86□□□□□ -0.19
SCN3B-206ENST00000530277 MAATS1Q7Z4T9 603 aa13.86□□□□□ -0.19
SCN3B-206ENST00000530277 SLF2Q8IX21 1173 aa13.86□□□□□ -0.19
SCN3B-206ENST00000530277 DDX39AO00148 427 aaKnown RBP13.86□□□□□ -0.19
SCN3B-206ENST00000530277 BTDP43251 543 aa13.86□□□□□ -0.19
SCN3B-206ENST00000530277 NONOQ15233 471 aaKnown RBP eCLIP13.86□□□□□ -0.19
SCN3B-206ENST00000530277 PAXIP1Q6ZW49 1069 aaPredicted RBP13.86□□□□□ -0.19
SCN3B-206ENST00000530277 C2CD5Q86YS7 1000 aa13.86□□□□□ -0.19
SCN3B-206ENST00000530277 RDH13Q8NBN7 331 aa13.86□□□□□ -0.19
SCN3B-206ENST00000530277 EPB41L4AQ9HCS5 686 aaPredicted RBP13.86□□□□□ -0.19
SCN3B-206ENST00000530277 TOGARAM2Q6ZUX3 1019 aa13.86□□□□□ -0.19
SCN3B-206ENST00000530277 SV2BQ7L1I2 683 aa13.86□□□□□ -0.19
SCN3B-206ENST00000530277 SPICE1Q8N0Z3 855 aa13.86□□□□□ -0.19
SCN3B-206ENST00000530277 GBP3Q9H0R5 595 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms