RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 ADAMTS7Q9UKP4 1686 aa11.6□□□□□ -0.55
CCDC90B-217ENST00000530253 CYP27B1O15528 508 aa11.6□□□□□ -0.55
CCDC90B-217ENST00000530253 PRKAR2BP31323 418 aa11.6□□□□□ -0.55
CCDC90B-217ENST00000530253 EIF1AXP47813 144 aaKnown RBP11.6□□□□□ -0.55
CCDC90B-217ENST00000530253 SMG8Q8ND04 991 aaKnown RBP11.6□□□□□ -0.55
CCDC90B-217ENST00000530253 ZCRB1Q8TBF4 217 aaKnown RBP11.6□□□□□ -0.55
CCDC90B-217ENST00000530253 SNX29Q8TEQ0 813 aa11.6□□□□□ -0.55
CCDC90B-217ENST00000530253 PNISRQ8TF01 805 aaKnown RBP11.6□□□□□ -0.55
CCDC90B-217ENST00000530253 PLEKHF1Q96S99 279 aa11.6□□□□□ -0.55
CCDC90B-217ENST00000530253 CHRDQ9H2X0 955 aa11.6□□□□□ -0.55
CCDC90B-217ENST00000530253 MRS2Q9HD23 443 aa11.6□□□□□ -0.55
CCDC90B-217ENST00000530253 ANGEL1Q9UNK9 670 aaKnown RBP11.6□□□□□ -0.55
CCDC90B-217ENST00000530253 LEMD3Q9Y2U8 911 aa11.6□□□□□ -0.55
CCDC90B-217ENST00000530253 CCER2I3L3R5 266 aa11.59□□□□□ -0.55
CCDC90B-217ENST00000530253 EXOC5O00471 708 aa11.59□□□□□ -0.55
CCDC90B-217ENST00000530253 USP5P45974 858 aa11.59□□□□□ -0.55
CCDC90B-217ENST00000530253 C12orf50Q8NA57 414 aaPredicted RBP11.59□□□□□ -0.55
CCDC90B-217ENST00000530253 NXPE3Q969Y0 559 aa11.59□□□□□ -0.55
CCDC90B-217ENST00000530253 PHACTR3Q96KR7 559 aa11.59□□□□□ -0.55
CCDC90B-217ENST00000530253 METTL22Q9BUU2 404 aaPredicted RBP11.59□□□□□ -0.55
CCDC90B-217ENST00000530253 TMPRSS13Q9BYE2 586 aa11.59□□□□□ -0.55
CCDC90B-217ENST00000530253 TNS1Q9HBL0 1735 aaKnown RBP11.59□□□□□ -0.55
CCDC90B-217ENST00000530253 PCDH11XQ9BZA7 1347 aa11.59□□□□□ -0.55
CCDC90B-217ENST00000530253 PCDH11YQ9BZA8 1340 aa11.59□□□□□ -0.55
CCDC90B-217ENST00000530253 PHACTR2O75167 634 aa11.58□□□□□ -0.56
CCDC90B-217ENST00000530253 ADAMTS4O75173 837 aa11.58□□□□□ -0.56
CCDC90B-217ENST00000530253 TRIM37O94972 964 aa11.58□□□□□ -0.56
CCDC90B-217ENST00000530253 SF3B2Q13435 895 aaKnown RBP11.58□□□□□ -0.56
CCDC90B-217ENST00000530253 ZKSCAN3Q9BRR0 538 aa11.58□□□□□ -0.56
CCDC90B-217ENST00000530253 YIPF2Q9BWQ6 316 aa11.58□□□□□ -0.56
CCDC90B-217ENST00000530253 USP26Q9BXU7 913 aa11.58□□□□□ -0.56
CCDC90B-217ENST00000530253 OSBPL1AQ9BXW6 950 aa11.58□□□□□ -0.56
CCDC90B-217ENST00000530253 KDM6AO15550 1401 aaPredicted RBP11.58□□□□□ -0.56
CCDC90B-217ENST00000530253 DOT1LQ8TEK3 1739 aa11.57□□□□□ -0.56
CCDC90B-217ENST00000530253 NHSQ6T4R5 1651 aa11.57□□□□□ -0.56
CCDC90B-217ENST00000530253 PHKG2P15735 406 aa11.57□□□□□ -0.56
CCDC90B-217ENST00000530253 MPSTP25325 297 aa11.57□□□□□ -0.56
CCDC90B-217ENST00000530253 PDE3BQ13370 1112 aa11.57□□□□□ -0.56
CCDC90B-217ENST00000530253 WDR43Q15061 677 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCDC90B-217ENST00000530253 MTHFSDQ2M296 383 aaKnown RBP11.57□□□□□ -0.56
CCDC90B-217ENST00000530253 AMOTQ4VCS5 1084 aa11.57□□□□□ -0.56
CCDC90B-217ENST00000530253 PLEKHO1Q53GL0 409 aaPredicted RBP11.57□□□□□ -0.56
CCDC90B-217ENST00000530253 SGO2Q562F6 1265 aa11.57□□□□□ -0.56
CCDC90B-217ENST00000530253 PAOXQ6QHF9 649 aa11.57□□□□□ -0.56
CCDC90B-217ENST00000530253 HHIPQ96QV1 700 aa11.57□□□□□ -0.56
CCDC90B-217ENST00000530253 SPG7Q9UQ90 795 aa11.57□□□□□ -0.56
CCDC90B-217ENST00000530253 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.57□□□□□ -0.56
CCDC90B-217ENST00000530253 SOX1O00570 391 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-217ENST00000530253 TRPA1O75762 1119 aa11.56□□□□□ -0.56
CCDC90B-217ENST00000530253 TIAF1O95411 115 aa11.56□□□□□ -0.56
CCDC90B-217ENST00000530253 ZNF530Q6P9A1 599 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-217ENST00000530253 VN1R5Q7Z5H4 357 aa11.56□□□□□ -0.56
CCDC90B-217ENST00000530253 BHLHE41Q9C0J9 482 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-217ENST00000530253 MRC1P22897 1456 aa11.56□□□□□ -0.56
CCDC90B-217ENST00000530253 LOC100289279A0A1B0GTE1 492 aa11.55□□□□□ -0.56
CCDC90B-217ENST00000530253 FAM95CA0A1B0GW59 222 aa11.55□□□□□ -0.56
CCDC90B-217ENST00000530253 A6NHS1 94 aa11.55□□□□□ -0.56
CCDC90B-217ENST00000530253 FOSL1P15407 271 aa11.55□□□□□ -0.56
CCDC90B-217ENST00000530253 PTF1AQ7RTS3 328 aa11.55□□□□□ -0.56
CCDC90B-217ENST00000530253 DDX54Q8TDD1 881 aaKnown RBP11.55□□□□□ -0.56
CCDC90B-217ENST00000530253 GTF3C2Q8WUA4 911 aaPredicted RBP11.55□□□□□ -0.56
CCDC90B-217ENST00000530253 KRTAP9-9Q9BYP9 154 aa11.55□□□□□ -0.56
CCDC90B-217ENST00000530253 KRTAP9-4Q9BYQ2 154 aa11.55□□□□□ -0.56
CCDC90B-217ENST00000530253 MTMR7Q9Y216 660 aa11.55□□□□□ -0.56
CCDC90B-217ENST00000530253 SBF2Q86WG5 1849 aa11.55□□□□□ -0.56
CCDC90B-217ENST00000530253 TNFRSF21O75509 655 aa11.54□□□□□ -0.56
CCDC90B-217ENST00000530253 USP11P51784 963 aa11.54□□□□□ -0.56
CCDC90B-217ENST00000530253 AAMPQ13685 434 aa11.54□□□□□ -0.56
CCDC90B-217ENST00000530253 EXOSC6Q5RKV6 272 aaKnown RBP11.54□□□□□ -0.56
CCDC90B-217ENST00000530253 FAM196AQ6ZSG2 479 aa11.54□□□□□ -0.56
CCDC90B-217ENST00000530253 IFNL2Q8IZJ0 200 aa11.54□□□□□ -0.56
CCDC90B-217ENST00000530253 FBXL6Q8N531 539 aa11.54□□□□□ -0.56
CCDC90B-217ENST00000530253 ADGRE2Q9UHX3 823 aa11.54□□□□□ -0.56
CCDC90B-217ENST00000530253 POLIQ9UNA4 740 aa11.54□□□□□ -0.56
CCDC90B-217ENST00000530253 MAP3K5Q99683 1374 aa11.54□□□□□ -0.56
CCDC90B-217ENST00000530253 EREGO14944 169 aa11.53□□□□□ -0.56
CCDC90B-217ENST00000530253 EZH2Q15910 746 aaKnown RBP11.53□□□□□ -0.56
CCDC90B-217ENST00000530253 AKAP4Q5JQC9 854 aa11.53□□□□□ -0.56
CCDC90B-217ENST00000530253 HP1BP3Q5SSJ5 553 aaPredicted RBP11.53□□□□□ -0.56
CCDC90B-217ENST00000530253 CCDC146Q8IYE0 955 aa11.53□□□□□ -0.56
CCDC90B-217ENST00000530253 ASAP3Q8TDY4 903 aa11.53□□□□□ -0.56
CCDC90B-217ENST00000530253 RUNDC1Q96C34 613 aa11.53□□□□□ -0.56
CCDC90B-217ENST00000530253 SCN11AQ9UI33 1791 aa11.53□□□□□ -0.56
CCDC90B-217ENST00000530253 FAM13AO94988 1023 aa11.52□□□□□ -0.57
CCDC90B-217ENST00000530253 NFE2L2Q16236 605 aa11.52□□□□□ -0.57
CCDC90B-217ENST00000530253 CEMIPQ8WUJ3 1361 aa11.52□□□□□ -0.57
CCDC90B-217ENST00000530253 DLG5Q8TDM6 1919 aa11.51□□□□□ -0.57
CCDC90B-217ENST00000530253 KCNQ2O43526 872 aa11.51□□□□□ -0.57
CCDC90B-217ENST00000530253 F13BP05160 661 aa11.51□□□□□ -0.57
CCDC90B-217ENST00000530253 ESRRAP11474 423 aaPredicted RBP11.51□□□□□ -0.57
CCDC90B-217ENST00000530253 HOXA10P31260 410 aaPredicted RBP11.51□□□□□ -0.57
CCDC90B-217ENST00000530253 NFKBIBQ15653 356 aa11.51□□□□□ -0.57
CCDC90B-217ENST00000530253 MSMPQ1L6U9 139 aa11.51□□□□□ -0.57
CCDC90B-217ENST00000530253 HGSNATQ68CP4 663 aa11.51□□□□□ -0.57
CCDC90B-217ENST00000530253 VSIG10LQ86VR7 867 aa11.51□□□□□ -0.57
CCDC90B-217ENST00000530253 FBXL18Q96ME1 805 aa11.51□□□□□ -0.57
CCDC90B-217ENST00000530253 PNNQ9H307 717 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-217ENST00000530253 MAPK8IP3Q9UPT6 1336 aa11.51□□□□□ -0.57
CCDC90B-217ENST00000530253 PAPPAQ13219 1627 aa11.5□□□□□ -0.57
CCDC90B-217ENST00000530253 SIPA1L3O60292 1781 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms