RNA–Protein interactions for RNA: ENST00000530075.1

GMDS-206, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-206ENST00000530075 FBXL18Q96ME1 805 aa8.18□□□□□ -1.1
GMDS-206ENST00000530075 FAM86C1Q9NVL1 165 aa8.18□□□□□ -1.1
GMDS-206ENST00000530075 PCDHB10Q9UN67 800 aa8.18□□□□□ -1.1
GMDS-206ENST00000530075 ST14Q9Y5Y6 855 aa8.18□□□□□ -1.1
GMDS-206ENST00000530075 FAM155AB1AL88 458 aaPredicted RBP8.17□□□□□ -1.1
GMDS-206ENST00000530075 CD96P40200 585 aa8.17□□□□□ -1.1
GMDS-206ENST00000530075 KIR3DL1P43629 444 aa8.17□□□□□ -1.1
GMDS-206ENST00000530075 CASP7P55210 303 aa8.17□□□□□ -1.1
GMDS-206ENST00000530075 BNIP3Q12983 259 aa8.17□□□□□ -1.1
GMDS-206ENST00000530075 IFI16Q16666 785 aaKnown RBP8.17□□□□□ -1.1
GMDS-206ENST00000530075 NFXL1Q6ZNB6 911 aa8.17□□□□□ -1.1
GMDS-206ENST00000530075 C19orf47Q8N9M1 422 aaKnown RBP8.17□□□□□ -1.1
GMDS-206ENST00000530075 HSPA12BQ96MM6 686 aa8.17□□□□□ -1.1
GMDS-206ENST00000530075 ASPNQ9BXN1 380 aa8.17□□□□□ -1.1
GMDS-206ENST00000530075 SUCOQ9UBS9 1254 aaKnown RBP8.17□□□□□ -1.1
GMDS-206ENST00000530075 PRKAG3Q9UGI9 489 aa8.17□□□□□ -1.1
GMDS-206ENST00000530075 KIAA1324LA8MWY0 1029 aaPredicted RBP8.16□□□□□ -1.1
GMDS-206ENST00000530075 HYAL3O43820 417 aaPredicted RBP8.16□□□□□ -1.1
GMDS-206ENST00000530075 SNW1Q13573 536 aaKnown RBP8.16□□□□□ -1.1
GMDS-206ENST00000530075 DHX38Q92620 1227 aaKnown RBP8.16□□□□□ -1.1
GMDS-206ENST00000530075 COX4I2Q96KJ9 171 aa8.16□□□□□ -1.1
GMDS-206ENST00000530075 ZNF214Q9UL59 606 aaPredicted RBP8.16□□□□□ -1.1
GMDS-206ENST00000530075 SHISA3A0PJX4 238 aa8.15□□□□□ -1.1
GMDS-206ENST00000530075 TP53P04637 393 aaPredicted RBP8.15□□□□□ -1.1
GMDS-206ENST00000530075 ATP2B1P20020 1258 aa8.15□□□□□ -1.1
GMDS-206ENST00000530075 PMS1P54277 932 aaKnown RBP8.15□□□□□ -1.1
GMDS-206ENST00000530075 CHMP4BP1P59074 171 aa8.15□□□□□ -1.1
GMDS-206ENST00000530075 NBPF9Q3BBW0 867 aa8.15□□□□□ -1.1
GMDS-206ENST00000530075 WFDC3Q8IUB2 231 aa8.15□□□□□ -1.1
GMDS-206ENST00000530075 MICAL1Q8TDZ2 1067 aa8.15□□□□□ -1.1
GMDS-206ENST00000530075 HNRNPLLQ8WVV9 542 aaKnown RBP8.15□□□□□ -1.1
GMDS-206ENST00000530075 DHRS1Q96LJ7 313 aa8.15□□□□□ -1.1
GMDS-206ENST00000530075 DUSP15Q9H1R2 295 aaPredicted RBP8.15□□□□□ -1.1
GMDS-206ENST00000530075 SEMA3GQ9NS98 782 aa8.15□□□□□ -1.1
GMDS-206ENST00000530075 BSDC1Q9NW68 430 aaPredicted RBP8.15□□□□□ -1.1
GMDS-206ENST00000530075 TMEM265A0A087WTH1 108 aa8.14□□□□□ -1.11
GMDS-206ENST00000530075 H3BS24 57 aa8.14□□□□□ -1.11
GMDS-206ENST00000530075 LRP8Q14114 963 aa8.14□□□□□ -1.11
GMDS-206ENST00000530075 AOC3Q16853 763 aa8.14□□□□□ -1.11
GMDS-206ENST00000530075 AXDND1Q5T1B0 1012 aaPredicted RBP8.14□□□□□ -1.11
GMDS-206ENST00000530075 ZNF574Q6ZN55 896 aaPredicted RBP8.14□□□□□ -1.11
GMDS-206ENST00000530075 ANKS3Q6ZW76 656 aa8.14□□□□□ -1.11
GMDS-206ENST00000530075 SPRED2Q7Z698 418 aa8.14□□□□□ -1.11
GMDS-206ENST00000530075 BCL7CQ8WUZ0 217 aaPredicted RBP8.14□□□□□ -1.11
GMDS-206ENST00000530075 MKRN2Q9H000 416 aaKnown RBP8.14□□□□□ -1.11
GMDS-206ENST00000530075 PCMTD2Q9NV79 361 aa8.14□□□□□ -1.11
GMDS-206ENST00000530075 CCDC39Q9UFE4 941 aa8.14□□□□□ -1.11
GMDS-206ENST00000530075 SHOXO15266 292 aa8.13□□□□□ -1.11
GMDS-206ENST00000530075 PRNPP04156 253 aa8.13□□□□□ -1.11
GMDS-206ENST00000530075 SRFP11831 508 aa8.13□□□□□ -1.11
GMDS-206ENST00000530075 GTF2F1P35269 517 aaKnown RBP eCLIP8.13□□□□□ -1.11
GMDS-206ENST00000530075 RNF4P78317 190 aa8.13□□□□□ -1.11
GMDS-206ENST00000530075 DCAF15Q66K64 600 aa8.13□□□□□ -1.11
GMDS-206ENST00000530075 TMC3Q7Z5M5 1100 aa8.13□□□□□ -1.11
GMDS-206ENST00000530075 PIWIL2Q8TC59 973 aaKnown RBP8.13□□□□□ -1.11
GMDS-206ENST00000530075 KLHL6Q8WZ60 621 aa8.13□□□□□ -1.11
GMDS-206ENST00000530075 PRDM14Q9GZV8 571 aa8.13□□□□□ -1.11
GMDS-206ENST00000530075 ZSWIM5Q9P217 1185 aa8.13□□□□□ -1.11
GMDS-206ENST00000530075 MINPP1Q9UNW1 487 aa8.13□□□□□ -1.11
GMDS-206ENST00000530075 SNX11Q9Y5W9 270 aa8.13□□□□□ -1.11
GMDS-206ENST00000530075 PITPNM2Q9BZ72 1349 aa8.12□□□□□ -1.11
GMDS-206ENST00000530075 SCO2A0A1W2PP80 73 aa8.12□□□□□ -1.11
GMDS-206ENST00000530075 KLF4O43474 513 aa8.12□□□□□ -1.11
GMDS-206ENST00000530075 CLCN7P51798 805 aa8.12□□□□□ -1.11
GMDS-206ENST00000530075 PRKCQQ04759 706 aa8.12□□□□□ -1.11
GMDS-206ENST00000530075 GNPTABQ3T906 1256 aa8.12□□□□□ -1.11
GMDS-206ENST00000530075 ARTNQ5T4W7 220 aa8.12□□□□□ -1.11
GMDS-206ENST00000530075 CCDC144CPQ8IYA2 1237 aa8.12□□□□□ -1.11
GMDS-206ENST00000530075 CELF2-AS1Q8N7Q2 184 aa8.12□□□□□ -1.11
GMDS-206ENST00000530075 SREK1Q8WXA9 508 aaKnown RBP8.12□□□□□ -1.11
GMDS-206ENST00000530075 UBE2FQ969M7 185 aa8.12□□□□□ -1.11
GMDS-206ENST00000530075 HRASLS5Q96KN8 279 aa8.12□□□□□ -1.11
GMDS-206ENST00000530075 ATP13A1Q9HD20 1204 aa8.12□□□□□ -1.11
GMDS-206ENST00000530075 ACTR10Q9NZ32 417 aa8.12□□□□□ -1.11
GMDS-206ENST00000530075 VAV3Q9UKW4 847 aa8.12□□□□□ -1.11
GMDS-206ENST00000530075 KCNH3Q9ULD8 1083 aa8.12□□□□□ -1.11
GMDS-206ENST00000530075 B2RBV5 119 aa8.11□□□□□ -1.11
GMDS-206ENST00000530075 STK10O94804 968 aaKnown RBP8.11□□□□□ -1.11
GMDS-206ENST00000530075 CD8BP10966 210 aa8.11□□□□□ -1.11
GMDS-206ENST00000530075 AUHQ13825 339 aaKnown RBP8.11□□□□□ -1.11
GMDS-206ENST00000530075 TNNI3KQ59H18 835 aa8.11□□□□□ -1.11
GMDS-206ENST00000530075 LARP1BQ659C4 914 aaKnown RBP8.11□□□□□ -1.11
GMDS-206ENST00000530075 GPR62Q9BZJ7 368 aa8.11□□□□□ -1.11
GMDS-206ENST00000530075 PHAXQ9H814 394 aaKnown RBP8.11□□□□□ -1.11
GMDS-206ENST00000530075 PPP1R1BQ9UD71 204 aaPredicted RBP8.11□□□□□ -1.11
GMDS-206ENST00000530075 SLC12A7Q9Y666 1083 aa8.11□□□□□ -1.11
GMDS-206ENST00000530075 CBFA2T2O43439 604 aa8.1□□□□□ -1.11
GMDS-206ENST00000530075 SLC7A5Q01650 507 aa8.1□□□□□ -1.11
GMDS-206ENST00000530075 KIAA1211LQ6NV74 962 aa8.1□□□□□ -1.11
GMDS-206ENST00000530075 VHLLQ6RSH7 139 aa8.1□□□□□ -1.11
GMDS-206ENST00000530075 C6orf15Q6UXA7 325 aaPredicted RBP8.1□□□□□ -1.11
GMDS-206ENST00000530075 ST7Q9NRC1 585 aa8.1□□□□□ -1.11
GMDS-206ENST00000530075 ZNF451Q9Y4E5 1061 aa8.1□□□□□ -1.11
GMDS-206ENST00000530075 NMIQ13287 307 aaPredicted RBP8.09□□□□□ -1.11
GMDS-206ENST00000530075 SF3A1Q15459 793 aaKnown RBP8.09□□□□□ -1.11
GMDS-206ENST00000530075 C7orf61Q8IZ16 206 aa8.09□□□□□ -1.11
GMDS-206ENST00000530075 MISP3Q96FF7 219 aa8.09□□□□□ -1.11
GMDS-206ENST00000530075 PAK6Q9NQU5 681 aaPredicted RBP8.09□□□□□ -1.11
GMDS-206ENST00000530075 FBXL21Q9UKT6 434 aa8.09□□□□□ -1.11
GMDS-206ENST00000530075 SLC5A6Q9Y289 635 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms