RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 DOCK3Q8IZD9 2030 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 E7EWF7 191 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 PDHXO00330 501 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 SLC27A2O14975 620 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 WDR46O15213 610 aaKnown RBP6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 NMT2O60551 498 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 KDM4AO75164 1064 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 REC8O95072 547 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 TTLL1O95922 423 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 VCAM1P19320 739 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 CRHR2Q13324 411 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 TAF1CQ15572 869 aaPredicted RBP6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 RRP12Q5JTH9 1297 aaKnown RBP6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 KIAA1755Q5JYT7 1200 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 PPP4R3BQ5MIZ7 849 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 CREB3L3Q68CJ9 461 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 RCSD1Q6JBY9 416 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 MB21D2Q8IYB1 491 aaPredicted RBP6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 GMCL1P1Q8NEA9 526 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 LPAR1Q92633 364 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 ESR2Q92731 530 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 KCNB2Q92953 911 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 PARK7Q99497 189 aaKnown RBP6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 FEZ1Q99689 392 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 KRT23Q9C075 422 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 R3HDMLQ9H3Y0 253 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 TOMM22Q9NS69 142 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 TMOD4Q9NZQ9 345 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 PLXNB2O15031 1838 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 ZNF236Q9UL36 1845 aa6.69□□□□□ -1.34
RPUSD4-204ENST00000530036 RBBP6Q7Z6E9 1792 aaKnown RBP6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 TLR2O60603 784 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 NDUFB10O96000 172 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 BCRP11274 1271 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 HSPA4P34932 840 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 ANTXR2P58335 489 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 PABPC4Q13310 644 aaKnown RBP eCLIP6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 COL9A3Q14050 684 aaPredicted RBP6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 ZYXQ15942 572 aaKnown RBP6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 TSGA10IPQ3SY00 556 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 C8orf34Q49A92 452 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 RNF20Q5VTR2 975 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 LBX2Q6XYB7 198 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 CYB5R4Q7L1T6 521 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 RASEFQ8IZ41 740 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 ENAHQ8N8S7 591 aaPredicted RBP6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 NCOA7Q8NI08 942 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 ANKS1AQ92625 1134 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 TTC14Q96N46 770 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 ASCC2Q9H1I8 757 aaPredicted RBP6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 ZFYVE28Q9HCC9 887 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 GOPCQ9HD26 462 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 ZSWIM5Q9P217 1185 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 CLIP2Q9UDT6 1046 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 TSKSQ9UJT2 592 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 PNMA3Q9UL41 463 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 STX8Q9UNK0 236 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 MYPNQ86TC9 1320 aa6.68□□□□□ -1.34
RPUSD4-204ENST00000530036 USP17L15C9J2P7 530 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 USP17L13C9JLJ4 530 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 USP17L11C9JVI0 530 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 USP17L18D6R9N7 530 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 USP17L22D6RA61 530 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 USP17L17D6RBQ6 530 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 USP17L19D6RCP7 530 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 USP17L20D6RJB6 530 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 F5H6K3 240 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 GPR25O00155 361 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 TBC1D8O95759 1140 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 CYP2C8P10632 490 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 TOP1P11387 765 aaKnown RBP6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 HERVK_113P62684 666 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 ATP2B2Q01814 1243 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 KLRC3Q07444 240 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 USP17L24Q0WX57 530 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 TRDNQ13061 729 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 SEC23AQ15436 765 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 CCDC178Q5BJE1 867 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 PRPF38BQ5VTL8 546 aaKnown RBP6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 POTEEQ6S8J3 1075 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 C17orf99Q6UX52 265 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 CATSPERGQ6ZRH7 1159 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 RALYLQ86SE5 291 aaKnown RBP6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 IQCA1Q86XH1 822 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 DGKHQ86XP1 1220 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 SPICE1Q8N0Z3 855 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 LRRC47Q8N1G4 583 aaKnown RBP6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 GMCL1Q96IK5 515 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 ZSCAN10Q96SZ4 725 aaPredicted RBP6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 TMEM47Q9BQJ4 181 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 ZKSCAN3Q9BRR0 538 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 MTA3Q9BTC8 594 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 USP26Q9BXU7 913 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 RPAP3Q9H6T3 665 aaPredicted RBP6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 CENPFP49454 3210 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 TNKSO95271 1327 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 SMCHD1A6NHR9 2005 aa6.67□□□□□ -1.34
RPUSD4-204ENST00000530036 ZNFX1Q9P2E3 1918 aaKnown RBP6.66□□□□□ -1.34
RPUSD4-204ENST00000530036 SPDYE16A6NNV3 312 aaPredicted RBP6.66□□□□□ -1.34
RPUSD4-204ENST00000530036 PLA2G6O60733 806 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms