RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 SNX16P57768 344 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 ARHGAP44Q17R89 818 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 EFCAB13Q8IY85 973 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 CARD14Q9BXL6 1004 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 ARMT1Q9H993 441 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.44□□□□□ -1.06
CTNND1-223ENST00000529986 POLE2P56282 527 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 GUCY2DQ02846 1103 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 TTLL12Q14166 644 aaPredicted RBP8.44□□□□□ -1.06
CTNND1-223ENST00000529986 CACTINQ8WUQ7 758 aaKnown RBP8.44□□□□□ -1.06
CTNND1-223ENST00000529986 EEF2KMTQ96G04 330 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 TROVE2P10155 538 aaKnown RBP eCLIP8.44□□□□□ -1.06
CTNND1-223ENST00000529986 CLCN6P51797 869 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 NAA35Q5VZE5 725 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 TTC6Q86TZ1 520 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 OR8K1Q8NGG5 319 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 CXorf38Q8TB03 319 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 KIFAP3Q92845 792 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 SLC24A3Q9HC58 644 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 ANGEL1Q9UNK9 670 aaKnown RBP8.44□□□□□ -1.06
CTNND1-223ENST00000529986 MX2P20592 715 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 CASC4Q6P4E1 433 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 CROCCP2Q86T23 111 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 SLC35F6Q8N357 371 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 TAB3Q8N5C8 712 aaPredicted RBP8.44□□□□□ -1.06
CTNND1-223ENST00000529986 U2AF1L4Q8WU68 220 aaKnown RBP8.44□□□□□ -1.06
CTNND1-223ENST00000529986 GPCPD1Q9NPB8 672 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 TSKSQ9UJT2 592 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 MTMR6Q9Y217 621 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 HYOU1Q9Y4L1 999 aa8.44□□□□□ -1.06
CTNND1-223ENST00000529986 KCNJ18B7U540 433 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 SPECC1L-ADORA2AF8WAN1 911 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 GNAT2P19087 354 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 CTDSPL2Q05D32 466 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 KCNJ12Q14500 433 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 HERC4Q5GLZ8 1057 aaPredicted RBP8.43□□□□□ -1.06
CTNND1-223ENST00000529986 CTAGE3PQ8IX95 158 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 TRIM58Q8NG06 486 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 RPGRIP1Q96KN7 1286 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 XAB2Q9HCS7 855 aaKnown RBP8.43□□□□□ -1.06
CTNND1-223ENST00000529986 SAP30BPQ9UHR5 308 aaKnown RBP8.43□□□□□ -1.06
CTNND1-223ENST00000529986 FLT4P35916 1363 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 FAM133BQ5BKY9 247 aaKnown RBP8.43□□□□□ -1.06
CTNND1-223ENST00000529986 NBPF6Q5VWK0 638 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 MIER3Q7Z3K6 550 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 CMTR1Q8N1G2 835 aaKnown RBP8.43□□□□□ -1.06
CTNND1-223ENST00000529986 PROCA1Q8NCQ7 364 aaPredicted RBP8.43□□□□□ -1.06
CTNND1-223ENST00000529986 MRFAP1L1Q96HT8 127 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 NBPF4Q96M43 638 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 RAB17Q9H0T7 212 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 KDM5CP41229 1560 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 CD2BP2O95400 341 aaKnown RBP8.43□□□□□ -1.06
CTNND1-223ENST00000529986 EIF6P56537 245 aaKnown RBP8.43□□□□□ -1.06
CTNND1-223ENST00000529986 WDR44Q5JSH3 913 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 SRGAP1Q7Z6B7 1085 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 RABGGTAQ92696 567 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 EDC3Q96F86 508 aaKnown RBP8.43□□□□□ -1.06
CTNND1-223ENST00000529986 LSM14BQ9BX40 385 aaKnown RBP8.43□□□□□ -1.06
CTNND1-223ENST00000529986 HDAC9Q9UKV0 1011 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 PREX2Q70Z35 1606 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 FLOT1O75955 427 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 ADALQ6DHV7 355 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 SPATS2Q86XZ4 545 aaKnown RBP8.43□□□□□ -1.06
CTNND1-223ENST00000529986 CLIC6Q96NY7 704 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 FNBP1Q96RU3 617 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 EFCC1Q9HA90 598 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 HOMER3Q9NSC5 361 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 SAMD9LQ8IVG5 1584 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 A0A087WUV0 522 aaPredicted RBP8.43□□□□□ -1.06
CTNND1-223ENST00000529986 CCDC169A6NNP5 214 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 PARP1P09874 1014 aaKnown RBP8.43□□□□□ -1.06
CTNND1-223ENST00000529986 SATB1Q01826 763 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 ZKSCAN8Q15776 578 aaPredicted RBP8.43□□□□□ -1.06
CTNND1-223ENST00000529986 BSPRYQ5W0U4 402 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 FBXO38Q6PIJ6 1188 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 ZNF622Q969S3 477 aaKnown RBP eCLIP8.43□□□□□ -1.063e-7■□□□□ 10.1
CTNND1-223ENST00000529986 VPS54Q9P1Q0 977 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 PPP1R9AQ9ULJ8 1098 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 TRIM35Q9UPQ4 493 aa8.43□□□□□ -1.06
CTNND1-223ENST00000529986 ATP10AO60312 1499 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 STX10O60499 249 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 LUC7L3O95232 432 aaKnown RBP8.42□□□□□ -1.06
CTNND1-223ENST00000529986 PPP1R2P41236 205 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 NDUFA8P51970 172 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 PRR16Q569H4 304 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 TNNI3KQ59H18 835 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 NBPF14Q5TI25 921 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 SYCE1Q8N0S2 351 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 RDH13Q8NBN7 331 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 LRRC59Q96AG4 307 aaKnown RBP8.42□□□□□ -1.06
CTNND1-223ENST00000529986 KRT12Q99456 494 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 AMFRQ9UKV5 643 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 FPGT-TNNI3KV9GXZ4 949 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 KDM6BO15054 1643 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 IFNB1P01574 187 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 SERPINB6P35237 376 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 PTH1RQ03431 593 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 MORC3Q14149 939 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 MYSM1Q5VVJ2 828 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 RASEFQ8IZ41 740 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms