RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 HPXP02790 462 aa5.68□□□□□ -1.5
CTR9-205ENST00000529898 CWF19L2Q2TBE0 894 aaKnown RBP5.68□□□□□ -1.5
CTR9-205ENST00000529898 RALGPS1Q5JS13 557 aa5.68□□□□□ -1.5
CTR9-205ENST00000529898 CDCP2Q5VXM1 449 aa5.68□□□□□ -1.5
CTR9-205ENST00000529898 CILP2Q8IUL8 1156 aa5.68□□□□□ -1.5
CTR9-205ENST00000529898 REXO1Q8N1G1 1221 aaKnown RBP5.68□□□□□ -1.5
CTR9-205ENST00000529898 BAHD1Q8TBE0 780 aaPredicted RBP5.68□□□□□ -1.5
CTR9-205ENST00000529898 GIPC2Q8TF65 315 aa5.68□□□□□ -1.5
CTR9-205ENST00000529898 ZNF296Q8WUU4 475 aaPredicted RBP5.68□□□□□ -1.5
CTR9-205ENST00000529898 LIN37Q96GY3 246 aaPredicted RBP5.68□□□□□ -1.5
CTR9-205ENST00000529898 ADAMTS1Q9UHI8 967 aa5.68□□□□□ -1.5
CTR9-205ENST00000529898 LRRN2O75325 713 aa5.67□□□□□ -1.5
CTR9-205ENST00000529898 TMEM67Q5HYA8 995 aa5.67□□□□□ -1.5
CTR9-205ENST00000529898 HS2ST1Q7LGA3 356 aa5.67□□□□□ -1.5
CTR9-205ENST00000529898 TTC6Q86TZ1 520 aa5.67□□□□□ -1.5
CTR9-205ENST00000529898 CREG2Q8IUH2 290 aa5.67□□□□□ -1.5
CTR9-205ENST00000529898 ENOX1Q8TC92 643 aaKnown RBP5.67□□□□□ -1.5
CTR9-205ENST00000529898 ADAMTS10Q9H324 1103 aa5.67□□□□□ -1.5
CTR9-205ENST00000529898 SLAMF8Q9P0V8 285 aa5.67□□□□□ -1.5
CTR9-205ENST00000529898 DBX1A6NMT0 343 aa5.66□□□□□ -1.5
CTR9-205ENST00000529898 UBOX5O94941 541 aa5.66□□□□□ -1.5
CTR9-205ENST00000529898 CRKP46108 304 aa5.66□□□□□ -1.5
CTR9-205ENST00000529898 MLECQ14165 292 aa5.66□□□□□ -1.5
CTR9-205ENST00000529898 NR0B2Q15466 257 aa5.66□□□□□ -1.5
CTR9-205ENST00000529898 KIF2CQ99661 725 aa5.66□□□□□ -1.5
CTR9-205ENST00000529898 NT5C1AQ9BXI3 368 aa5.66□□□□□ -1.5
CTR9-205ENST00000529898 CNNM2Q9H8M5 875 aa5.66□□□□□ -1.5
CTR9-205ENST00000529898 BRMS1Q9HCU9 246 aa5.66□□□□□ -1.5
CTR9-205ENST00000529898 GMIPQ9P107 970 aa5.66□□□□□ -1.5
CTR9-205ENST00000529898 KLHL3Q9UH77 587 aa5.66□□□□□ -1.5
CTR9-205ENST00000529898 DUSP13Q9UII6 198 aa5.66□□□□□ -1.5
CTR9-205ENST00000529898 GGT7Q9UJ14 662 aa5.66□□□□□ -1.5
CTR9-205ENST00000529898 PCDHB14Q9Y5E9 798 aa5.66□□□□□ -1.5
CTR9-205ENST00000529898 CCDC180Q9P1Z9 1646 aa5.66□□□□□ -1.5
CTR9-205ENST00000529898 ZGLP1P0C6A0 271 aa5.65□□□□□ -1.5
CTR9-205ENST00000529898 RAC2P15153 192 aa5.65□□□□□ -1.5
CTR9-205ENST00000529898 ZNF16P17020 682 aaPredicted RBP5.65□□□□□ -1.5
CTR9-205ENST00000529898 CCNFP41002 786 aa5.65□□□□□ -1.5
CTR9-205ENST00000529898 MLANAQ16655 118 aa5.65□□□□□ -1.5
CTR9-205ENST00000529898 PRR23BQ6ZRT6 265 aa5.65□□□□□ -1.5
CTR9-205ENST00000529898 KSR1Q8IVT5 923 aa5.65□□□□□ -1.5
CTR9-205ENST00000529898 SLITRK4Q8IW52 837 aa5.65□□□□□ -1.5
CTR9-205ENST00000529898 PDZD8Q8NEN9 1154 aa5.65□□□□□ -1.5
CTR9-205ENST00000529898 ABHD4Q8TB40 342 aa5.65□□□□□ -1.5
CTR9-205ENST00000529898 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.65□□□□□ -1.5
CTR9-205ENST00000529898 SHISA3A0PJX4 238 aa5.64□□□□□ -1.51
CTR9-205ENST00000529898 MEIS3P2A8K0S8 358 aa5.64□□□□□ -1.51
CTR9-205ENST00000529898 TLR3O15455 904 aaKnown RBP5.64□□□□□ -1.51
CTR9-205ENST00000529898 KRT1P04264 644 aa5.64□□□□□ -1.51
CTR9-205ENST00000529898 TNNI2P48788 182 aa5.64□□□□□ -1.51
CTR9-205ENST00000529898 TEKQ02763 1124 aa5.64□□□□□ -1.51
CTR9-205ENST00000529898 EGR3Q06889 387 aa5.64□□□□□ -1.51
CTR9-205ENST00000529898 ZNF124Q15973 351 aa5.64□□□□□ -1.51
CTR9-205ENST00000529898 ARSHQ5FYA8 562 aa5.64□□□□□ -1.51
CTR9-205ENST00000529898 PHACTR4Q8IZ21 702 aa5.64□□□□□ -1.51
CTR9-205ENST00000529898 LILRA2Q8N149 483 aa5.64□□□□□ -1.51
CTR9-205ENST00000529898 SYTL5Q8TDW5 730 aaPredicted RBP5.64□□□□□ -1.51
CTR9-205ENST00000529898 MYLIPQ8WY64 445 aa5.64□□□□□ -1.51
CTR9-205ENST00000529898 SLC38A3Q99624 504 aa5.64□□□□□ -1.51
CTR9-205ENST00000529898 PCDHA11Q9Y5I1 949 aa5.64□□□□□ -1.51
CTR9-205ENST00000529898 ZCCHC6Q5VYS8 1495 aaKnown RBP5.64□□□□□ -1.51
CTR9-205ENST00000529898 TSPAN15O95858 294 aa5.63□□□□□ -1.51
CTR9-205ENST00000529898 GBP1P32455 592 aa5.63□□□□□ -1.51
CTR9-205ENST00000529898 ERVFC1P60507 584 aa5.63□□□□□ -1.51
CTR9-205ENST00000529898 RNF4P78317 190 aa5.63□□□□□ -1.51
CTR9-205ENST00000529898 RAD51AP2Q09MP3 1159 aa5.63□□□□□ -1.51
CTR9-205ENST00000529898 NBPF9Q3BBW0 867 aa5.63□□□□□ -1.51
CTR9-205ENST00000529898 NBPF12Q5TAG4 269 aaPredicted RBP5.63□□□□□ -1.51
CTR9-205ENST00000529898 DAGLBQ8NCG7 672 aa5.63□□□□□ -1.51
CTR9-205ENST00000529898 LINC01599Q8WXQ3 324 aa5.63□□□□□ -1.51
CTR9-205ENST00000529898 DHX38Q92620 1227 aaKnown RBP5.63□□□□□ -1.51
CTR9-205ENST00000529898 ATG4CQ96DT6 458 aa5.63□□□□□ -1.51
CTR9-205ENST00000529898 UBP1Q9NZI7 540 aa5.63□□□□□ -1.51
CTR9-205ENST00000529898 RAG1P15918 1043 aa5.62□□□□□ -1.51
CTR9-205ENST00000529898 ZNF165P49910 485 aa5.62□□□□□ -1.51
CTR9-205ENST00000529898 HK2P52789 917 aa5.62□□□□□ -1.51
CTR9-205ENST00000529898 CLCQ05315 142 aa5.62□□□□□ -1.51
CTR9-205ENST00000529898 PKN1Q16512 942 aa5.62□□□□□ -1.51
CTR9-205ENST00000529898 LRRFIP1Q32MZ4 808 aaKnown RBP5.62□□□□□ -1.51
CTR9-205ENST00000529898 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
CTR9-205ENST00000529898 OVOS1Q6IE37 1185 aa5.62□□□□□ -1.51
CTR9-205ENST00000529898 USHBP1Q8N6Y0 703 aa5.62□□□□□ -1.51
CTR9-205ENST00000529898 EAF1Q96JC9 268 aaPredicted RBP5.62□□□□□ -1.51
CTR9-205ENST00000529898 PPP1R16BQ96T49 567 aa5.62□□□□□ -1.51
CTR9-205ENST00000529898 G6PC3Q9BUM1 346 aa5.62□□□□□ -1.51
CTR9-205ENST00000529898 HDAC8Q9BY41 377 aa5.62□□□□□ -1.51
CTR9-205ENST00000529898 METTL5Q9NRN9 209 aaKnown RBP5.62□□□□□ -1.51
CTR9-205ENST00000529898 EBF1Q9UH73 591 aa5.62□□□□□ -1.51
CTR9-205ENST00000529898 MYO15BQ96JP2 1530 aa5.62□□□□□ -1.51
CTR9-205ENST00000529898 FITM1A5D6W6 292 aa5.61□□□□□ -1.51
CTR9-205ENST00000529898 TNFRSF10CO14798 259 aa5.61□□□□□ -1.51
CTR9-205ENST00000529898 APOBRQ0VD83 1088 aa5.61□□□□□ -1.51
CTR9-205ENST00000529898 NMIQ13287 307 aaPredicted RBP5.61□□□□□ -1.51
CTR9-205ENST00000529898 SNX17Q15036 470 aa5.61□□□□□ -1.51
CTR9-205ENST00000529898 GLIPR1L2Q4G1C9 344 aa5.61□□□□□ -1.51
CTR9-205ENST00000529898 SEZ6Q53EL9 994 aa5.61□□□□□ -1.51
CTR9-205ENST00000529898 TAF7LQ5H9L4 462 aa5.61□□□□□ -1.51
CTR9-205ENST00000529898 INTS3Q68E01 1043 aaKnown RBP5.61□□□□□ -1.51
CTR9-205ENST00000529898 MPZL3Q6UWV2 235 aa5.61□□□□□ -1.51
CTR9-205ENST00000529898 RNF111Q6ZNA4 994 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms