RNA–Protein interactions for RNA: ENST00000529673.5

SNX15-206, Transcript of sorting nexin 15, humanhuman

TSL 3

Gene SNX15, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15-206ENST00000529673 USP17L2Q6R6M4 530 aa16.35■□□□□ 0.21
SNX15-206ENST00000529673 DYNLL2Q96FJ2 89 aa16.35■□□□□ 0.21
SNX15-206ENST00000529673 YTHDC1Q96MU7 727 aaKnown RBP16.35■□□□□ 0.21
SNX15-206ENST00000529673 PAGR1Q9BTK6 254 aa16.35■□□□□ 0.21
SNX15-206ENST00000529673 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.35■□□□□ 0.21
SNX15-206ENST00000529673 CCND3P30281 292 aaPredicted RBP16.34■□□□□ 0.21
SNX15-206ENST00000529673 MAPK4P31152 587 aa16.34■□□□□ 0.21
SNX15-206ENST00000529673 GUCY1A2P33402 732 aa16.34■□□□□ 0.21
SNX15-206ENST00000529673 RGS2P41220 211 aa16.34■□□□□ 0.21
SNX15-206ENST00000529673 GABPAQ06546 454 aa16.34■□□□□ 0.21
SNX15-206ENST00000529673 SEPT2Q15019 361 aa16.34■□□□□ 0.21
SNX15-206ENST00000529673 POTEEQ6S8J3 1075 aa16.34■□□□□ 0.21
SNX15-206ENST00000529673 FAM122AQ96E09 287 aa16.34■□□□□ 0.21
SNX15-206ENST00000529673 SENP6Q9GZR1 1112 aaPredicted RBP16.34■□□□□ 0.21
SNX15-206ENST00000529673 TTYH1Q9H313 450 aaPredicted RBP16.34■□□□□ 0.21
SNX15-206ENST00000529673 CABP5Q9NP86 173 aa16.34■□□□□ 0.21
SNX15-206ENST00000529673 PCDHB15Q9Y5E8 787 aa16.34■□□□□ 0.21
SNX15-206ENST00000529673 MUC3AQ02505 3323 aa16.33■□□□□ 0.2
SNX15-206ENST00000529673 SHHQ15465 462 aa16.33■□□□□ 0.2
SNX15-206ENST00000529673 CLEC10AQ8IUN9 316 aa16.33■□□□□ 0.2
SNX15-206ENST00000529673 GPRC5AQ8NFJ5 357 aa16.33■□□□□ 0.2
SNX15-206ENST00000529673 APBA2Q99767 749 aa16.33■□□□□ 0.2
SNX15-206ENST00000529673 DCTPP1Q9H773 170 aa16.33■□□□□ 0.2
SNX15-206ENST00000529673 ECHDC1Q9NTX5 307 aa16.33■□□□□ 0.2
SNX15-206ENST00000529673 RBPJLQ9UBG7 517 aa16.33■□□□□ 0.2
SNX15-206ENST00000529673 LTBP2Q14767 1821 aa16.33■□□□□ 0.2
SNX15-206ENST00000529673 BAZ2AQ9UIF9 1905 aaKnown RBP16.33■□□□□ 0.2
SNX15-206ENST00000529673 MSCO60682 206 aa16.32■□□□□ 0.2
SNX15-206ENST00000529673 MYH7P12883 1935 aa16.32■□□□□ 0.2
SNX15-206ENST00000529673 RRP1P56182 461 aaKnown RBP16.32■□□□□ 0.2
SNX15-206ENST00000529673 Q3C1V9 767 aa16.32■□□□□ 0.2
SNX15-206ENST00000529673 CCAR1Q8IX12 1150 aaKnown RBP16.32■□□□□ 0.2
SNX15-206ENST00000529673 PUS7LQ9H0K6 701 aaKnown RBP16.32■□□□□ 0.2
SNX15-206ENST00000529673 PORCNQ9H237 461 aa16.32■□□□□ 0.2
SNX15-206ENST00000529673 VCAM1P19320 739 aa16.31■□□□□ 0.2
SNX15-206ENST00000529673 UBE3CQ15386 1083 aa16.31■□□□□ 0.2
SNX15-206ENST00000529673 USP6NLQ92738 828 aa16.31■□□□□ 0.2
SNX15-206ENST00000529673 C12orf42Q96LP6 360 aa16.31■□□□□ 0.2
SNX15-206ENST00000529673 KIAA1683Q9H0B3 1180 aa16.31■□□□□ 0.2
SNX15-206ENST00000529673 SLC4A4Q9Y6R1 1079 aa16.31■□□□□ 0.2
SNX15-206ENST00000529673 CDH23Q9H251 3354 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 A0A1W2PRG0 241 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 USP17L15C9J2P7 530 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 USP17L13C9JLJ4 530 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 USP17L12C9JPN9 530 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 USP17L11C9JVI0 530 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 USP17L21D6R901 530 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 USP17L18D6R9N7 530 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 USP17L22D6RA61 530 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 USP17L17D6RBQ6 530 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 USP17L19D6RCP7 530 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 USP17L20D6RJB6 530 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 DNM1LO00429 736 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 AKR1B1P15121 316 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 ATN1P54259 1190 aaPredicted RBP16.3■□□□□ 0.2
SNX15-206ENST00000529673 USP14P54578 494 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 RTP1P59025 263 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 ERVK-9P63128 1117 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 ERVK-24P63145 666 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 USP17L24Q0WX57 530 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 C9orf50Q5SZB4 431 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 OTUD7AQ8TE49 926 aaPredicted RBP16.3■□□□□ 0.2
SNX15-206ENST00000529673 GTF3C2Q8WUA4 911 aaPredicted RBP16.3■□□□□ 0.2
SNX15-206ENST00000529673 RPAP3Q9H6T3 665 aaPredicted RBP16.3■□□□□ 0.2
SNX15-206ENST00000529673 RAPGEFL1Q9UHV5 662 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 FRMPD3Q5JV73 1810 aa16.3■□□□□ 0.2
SNX15-206ENST00000529673 CNMDO75829 334 aa16.29■□□□□ 0.2
SNX15-206ENST00000529673 CCL14Q16627 93 aa16.29■□□□□ 0.2
SNX15-206ENST00000529673 MFSD14CQ5VZR4 134 aa16.29■□□□□ 0.2
SNX15-206ENST00000529673 GPR142Q7Z601 462 aa16.29■□□□□ 0.2
SNX15-206ENST00000529673 STK11IPQ8N1F8 1099 aa16.29■□□□□ 0.2
SNX15-206ENST00000529673 LPAR1Q92633 364 aa16.29■□□□□ 0.2
SNX15-206ENST00000529673 CRBNQ96SW2 442 aa16.29■□□□□ 0.2
SNX15-206ENST00000529673 ATP8A2Q9NTI2 1148 aa16.29■□□□□ 0.2
SNX15-206ENST00000529673 DDX20Q9UHI6 824 aaKnown RBP16.29■□□□□ 0.2
SNX15-206ENST00000529673 MYH8P13535 1937 aa16.28■□□□□ 0.2
SNX15-206ENST00000529673 CDK8P49336 464 aa16.28■□□□□ 0.2
SNX15-206ENST00000529673 KIAA1755Q5JYT7 1200 aa16.28■□□□□ 0.2
SNX15-206ENST00000529673 MORN1Q5T089 497 aa16.28■□□□□ 0.2
SNX15-206ENST00000529673 C12orf60Q5U649 245 aa16.28■□□□□ 0.2
SNX15-206ENST00000529673 WDR78Q5VTH9 848 aa16.28■□□□□ 0.2
SNX15-206ENST00000529673 ZSCAN25Q6NSZ9 544 aa16.28■□□□□ 0.2
SNX15-206ENST00000529673 CATSPERGQ6ZRH7 1159 aa16.28■□□□□ 0.2
SNX15-206ENST00000529673 PLEKHH3Q7Z736 793 aa16.28■□□□□ 0.2
SNX15-206ENST00000529673 GPATCH3Q96I76 525 aa16.28■□□□□ 0.2
SNX15-206ENST00000529673 CWC22Q9HCG8 908 aaKnown RBP16.28■□□□□ 0.2
SNX15-206ENST00000529673 SWAP70Q9UH65 585 aa16.28■□□□□ 0.2
SNX15-206ENST00000529673 ATP11BQ9Y2G3 1177 aa16.28■□□□□ 0.2
SNX15-206ENST00000529673 CTR9Q6PD62 1173 aa16.27■□□□□ 0.2
SNX15-206ENST00000529673 TMEM179Q6ZVK1 233 aa16.27■□□□□ 0.2
SNX15-206ENST00000529673 AMOTL1Q8IY63 956 aa16.27■□□□□ 0.2
SNX15-206ENST00000529673 KBTBD3Q8NAB2 608 aa16.27■□□□□ 0.2
SNX15-206ENST00000529673 OSBP2Q969R2 916 aa16.27■□□□□ 0.2
SNX15-206ENST00000529673 PRDM5Q9NQX1 630 aaPredicted RBP16.27■□□□□ 0.2
SNX15-206ENST00000529673 BTBD7Q9P203 1132 aa16.27■□□□□ 0.2
SNX15-206ENST00000529673 SPDYE16A6NNV3 312 aaPredicted RBP16.26■□□□□ 0.19
SNX15-206ENST00000529673 GLRX3O76003 335 aaKnown RBP16.26■□□□□ 0.19
SNX15-206ENST00000529673 ATP2B2Q01814 1243 aa16.26■□□□□ 0.19
SNX15-206ENST00000529673 ICA1Q05084 483 aa16.26■□□□□ 0.19
SNX15-206ENST00000529673 MAP2K5Q13163 448 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms