RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 BCAR3O75815 825 aa10.45□□□□□ -0.74
TGFBR3-208ENST00000529608 CT47B1P0C2W7 299 aaPredicted RBP10.45□□□□□ -0.74
TGFBR3-208ENST00000529608 ZKSCAN1P17029 563 aaPredicted RBP10.45□□□□□ -0.74
TGFBR3-208ENST00000529608 ZAP70P43403 619 aa10.45□□□□□ -0.74
TGFBR3-208ENST00000529608 ZYXQ15942 572 aaKnown RBP10.45□□□□□ -0.74
TGFBR3-208ENST00000529608 TNNI3KQ59H18 835 aa10.45□□□□□ -0.74
TGFBR3-208ENST00000529608 B4GALNT3Q6L9W6 998 aa10.45□□□□□ -0.74
TGFBR3-208ENST00000529608 FOXP4Q8IVH2 680 aaPredicted RBP10.45□□□□□ -0.74
TGFBR3-208ENST00000529608 SOCS4Q8WXH5 440 aa10.45□□□□□ -0.74
TGFBR3-208ENST00000529608 ARHGAP45Q92619 1136 aa10.45□□□□□ -0.74
TGFBR3-208ENST00000529608 DHX36Q9H2U1 1008 aaKnown RBP10.45□□□□□ -0.74
TGFBR3-208ENST00000529608 TLR7Q9NYK1 1049 aaKnown RBP10.45□□□□□ -0.74
TGFBR3-208ENST00000529608 HDAC5Q9UQL6 1122 aa10.45□□□□□ -0.74
TGFBR3-208ENST00000529608 FPGT-TNNI3KV9GXZ4 949 aa10.45□□□□□ -0.74
TGFBR3-208ENST00000529608 DNAH12Q6ZR08 3092 aa10.45□□□□□ -0.74
TGFBR3-208ENST00000529608 A0A0G2JMZ2 1700 aa10.44□□□□□ -0.74
TGFBR3-208ENST00000529608 EYSQ5T1H1 3165 aa10.44□□□□□ -0.74
TGFBR3-208ENST00000529608 GH2P01242 217 aa10.44□□□□□ -0.74
TGFBR3-208ENST00000529608 GNAI2P04899 355 aa10.44□□□□□ -0.74
TGFBR3-208ENST00000529608 UQCRFS1P1P0C7P4 283 aa10.44□□□□□ -0.74
TGFBR3-208ENST00000529608 MAPK4P31152 587 aa10.44□□□□□ -0.74
TGFBR3-208ENST00000529608 G3BP1Q13283 466 aaKnown RBP eCLIP10.44□□□□□ -0.748e-7■□□□□ 8.4
TGFBR3-208ENST00000529608 PLEKHH3Q7Z736 793 aa10.44□□□□□ -0.74
TGFBR3-208ENST00000529608 CRACR2BQ8N4Y2 399 aaPredicted RBP10.44□□□□□ -0.74
TGFBR3-208ENST00000529608 TRPV1Q8NER1 839 aa10.44□□□□□ -0.74
TGFBR3-208ENST00000529608 NPLOC4Q8TAT6 608 aa10.44□□□□□ -0.74
TGFBR3-208ENST00000529608 CLUAP1Q96AJ1 413 aa10.44□□□□□ -0.74
TGFBR3-208ENST00000529608 GUCD1Q96NT3 240 aa10.44□□□□□ -0.74
TGFBR3-208ENST00000529608 BTBD7Q9P203 1132 aa10.44□□□□□ -0.74
TGFBR3-208ENST00000529608 NAV1Q8NEY1 1877 aa10.44□□□□□ -0.74
TGFBR3-208ENST00000529608 PARP14Q460N5 1801 aa10.44□□□□□ -0.74
TGFBR3-208ENST00000529608 A0A0C4DFX4 3053 aa10.44□□□□□ -0.74
TGFBR3-208ENST00000529608 BAG3O95817 575 aa10.43□□□□□ -0.74
TGFBR3-208ENST00000529608 IGHA2P01877 340 aa10.43□□□□□ -0.74
TGFBR3-208ENST00000529608 RGS2P41220 211 aa10.43□□□□□ -0.74
TGFBR3-208ENST00000529608 MAP2K5Q13163 448 aa10.43□□□□□ -0.74
TGFBR3-208ENST00000529608 TTC39AQ5SRH9 613 aa10.43□□□□□ -0.74
TGFBR3-208ENST00000529608 TATDN1Q6P1N9 297 aa10.43□□□□□ -0.74
TGFBR3-208ENST00000529608 MIGA1Q8NAN2 632 aa10.43□□□□□ -0.74
TGFBR3-208ENST00000529608 ACER1Q8TDN7 264 aa10.43□□□□□ -0.74
TGFBR3-208ENST00000529608 C12orf42Q96LP6 360 aa10.43□□□□□ -0.74
TGFBR3-208ENST00000529608 APBA2Q99767 749 aa10.43□□□□□ -0.74
TGFBR3-208ENST00000529608 COL25A1Q9BXS0 654 aaPredicted RBP10.43□□□□□ -0.74
TGFBR3-208ENST00000529608 DBNLQ9UJU6 430 aaKnown RBP10.43□□□□□ -0.74
TGFBR3-208ENST00000529608 LAMA2P24043 3122 aaKnown RBP10.42□□□□□ -0.74
TGFBR3-208ENST00000529608 ZNF236Q9UL36 1845 aa10.42□□□□□ -0.74
TGFBR3-208ENST00000529608 PTPREP23469 700 aa10.42□□□□□ -0.74
TGFBR3-208ENST00000529608 CYP2C19P33261 490 aa10.42□□□□□ -0.74
TGFBR3-208ENST00000529608 GUCY1A2P33402 732 aa10.42□□□□□ -0.74
TGFBR3-208ENST00000529608 PDE3AQ14432 1141 aa10.42□□□□□ -0.74
TGFBR3-208ENST00000529608 VARS2Q5ST30 1063 aaKnown RBP10.42□□□□□ -0.74
TGFBR3-208ENST00000529608 USP17L2Q6R6M4 530 aa10.42□□□□□ -0.74
TGFBR3-208ENST00000529608 CATSPERGQ6ZRH7 1159 aa10.42□□□□□ -0.74
TGFBR3-208ENST00000529608 TMEM57Q8N5G2 664 aa10.42□□□□□ -0.74
TGFBR3-208ENST00000529608 EDC3Q96F86 508 aaKnown RBP10.42□□□□□ -0.74
TGFBR3-208ENST00000529608 FAM161BQ96MY7 647 aa10.42□□□□□ -0.74
TGFBR3-208ENST00000529608 NOL10Q9BSC4 688 aaKnown RBP10.42□□□□□ -0.74
TGFBR3-208ENST00000529608 SENP6Q9GZR1 1112 aaPredicted RBP10.42□□□□□ -0.74
TGFBR3-208ENST00000529608 ANTXR1Q9H6X2 564 aa10.42□□□□□ -0.74
TGFBR3-208ENST00000529608 C1orf115Q9H7X2 142 aa10.42□□□□□ -0.74
TGFBR3-208ENST00000529608 GPR108Q9NPR9 543 aa10.42□□□□□ -0.74
TGFBR3-208ENST00000529608 VCAM1P19320 739 aa10.41□□□□□ -0.74
TGFBR3-208ENST00000529608 CYP7A1P22680 504 aa10.41□□□□□ -0.74
TGFBR3-208ENST00000529608 SHMT1P34896 483 aa10.41□□□□□ -0.74
TGFBR3-208ENST00000529608 PLCD1P51178 756 aa10.41□□□□□ -0.74
TGFBR3-208ENST00000529608 CCDC158Q5M9N0 1113 aa10.41□□□□□ -0.74
TGFBR3-208ENST00000529608 ATF7IPQ6VMQ6 1270 aa10.41□□□□□ -0.74
TGFBR3-208ENST00000529608 TRMT44Q8IYL2 757 aaKnown RBP10.41□□□□□ -0.74
TGFBR3-208ENST00000529608 SSH3Q8TE77 659 aa10.41□□□□□ -0.74
TGFBR3-208ENST00000529608 FRAT1Q92837 279 aaPredicted RBP10.41□□□□□ -0.74
TGFBR3-208ENST00000529608 EAF2Q96CJ1 260 aaPredicted RBP10.41□□□□□ -0.74
TGFBR3-208ENST00000529608 ZNF512BQ96KM6 892 aaPredicted RBP10.41□□□□□ -0.74
TGFBR3-208ENST00000529608 CCDC8Q9H0W5 538 aaPredicted RBP10.41□□□□□ -0.74
TGFBR3-208ENST00000529608 GINM1Q9NU53 330 aa10.41□□□□□ -0.74
TGFBR3-208ENST00000529608 RABGAP1Q9Y3P9 1069 aa10.41□□□□□ -0.74
TGFBR3-208ENST00000529608 COL11A1P12107 1806 aaPredicted RBP10.41□□□□□ -0.74
TGFBR3-208ENST00000529608 SPTBN5Q9NRC6 3674 aaKnown RBP10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 A0A1W2PRG0 241 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 SPDYE16A6NNV3 312 aaPredicted RBP10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 USP17L15C9J2P7 530 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 USP17L13C9JLJ4 530 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 USP17L11C9JVI0 530 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 USP17L18D6R9N7 530 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 USP17L22D6RA61 530 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 USP17L17D6RBQ6 530 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 USP17L19D6RCP7 530 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 USP17L20D6RJB6 530 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 ATP8B2P98198 1209 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 PLCB2Q00722 1185 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 USP17L24Q0WX57 530 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 CAMK2BQ13554 666 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 GRB14Q14449 540 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 RAB3GAP1Q15042 981 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 KIAA1755Q5JYT7 1200 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 WDR78Q5VTH9 848 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 ANO1Q5XXA6 986 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 EXOC6Q8TAG9 804 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 TRIM34Q9BYJ4 488 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 KIAA1683Q9H0B3 1180 aa10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 DDX20Q9UHI6 824 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms