RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 SNRKQ9NRH2 765 aa11□□□□□ -0.65
VPS11-203ENST00000529545 GNAI2P04899 355 aa10.99□□□□□ -0.65
VPS11-203ENST00000529545 HOXC6P09630 235 aa10.99□□□□□ -0.65
VPS11-203ENST00000529545 CYP2C19P33261 490 aa10.99□□□□□ -0.65
VPS11-203ENST00000529545 RAB3GAP1Q15042 981 aa10.99□□□□□ -0.65
VPS11-203ENST00000529545 SHROOM1Q2M3G4 852 aaPredicted RBP10.99□□□□□ -0.65
VPS11-203ENST00000529545 CATSPERGQ6ZRH7 1159 aa10.99□□□□□ -0.65
VPS11-203ENST00000529545 CERS3Q8IU89 383 aa10.99□□□□□ -0.65
VPS11-203ENST00000529545 ARHGAP45Q92619 1136 aa10.99□□□□□ -0.65
VPS11-203ENST00000529545 SYMPKQ92797 1274 aaKnown RBP10.99□□□□□ -0.65
VPS11-203ENST00000529545 CDCA7LQ96GN5 454 aa10.99□□□□□ -0.65
VPS11-203ENST00000529545 SEMA6BQ9H3T3 888 aa10.99□□□□□ -0.65
VPS11-203ENST00000529545 CABP5Q9NP86 173 aa10.99□□□□□ -0.65
VPS11-203ENST00000529545 PRDM5Q9NQX1 630 aaPredicted RBP10.99□□□□□ -0.65
VPS11-203ENST00000529545 FLRT1Q9NZU1 646 aa10.99□□□□□ -0.65
VPS11-203ENST00000529545 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.99□□□□□ -0.65
VPS11-203ENST00000529545 FOCADQ5VW36 1801 aa10.99□□□□□ -0.65
VPS11-203ENST00000529545 CDK5RAP2Q96SN8 1893 aa10.99□□□□□ -0.65
VPS11-203ENST00000529545 CNMDO75829 334 aa10.98□□□□□ -0.65
VPS11-203ENST00000529545 USP5P45974 858 aa10.98□□□□□ -0.65
VPS11-203ENST00000529545 OS9Q13438 667 aaPredicted RBP10.98□□□□□ -0.65
VPS11-203ENST00000529545 GRB14Q14449 540 aa10.98□□□□□ -0.65
VPS11-203ENST00000529545 SHHQ15465 462 aa10.98□□□□□ -0.65
VPS11-203ENST00000529545 GJC2Q5T442 439 aaPredicted RBP10.98□□□□□ -0.65
VPS11-203ENST00000529545 KIAA1683Q9H0B3 1180 aa10.98□□□□□ -0.65
VPS11-203ENST00000529545 SLC5A4Q9NY91 659 aa10.98□□□□□ -0.65
VPS11-203ENST00000529545 SERPINB13Q9UIV8 391 aa10.98□□□□□ -0.65
VPS11-203ENST00000529545 MYH1P12882 1939 aa10.97□□□□□ -0.65
VPS11-203ENST00000529545 IPO8O15397 1037 aaKnown RBP10.97□□□□□ -0.65
VPS11-203ENST00000529545 STRNO43815 780 aa10.97□□□□□ -0.65
VPS11-203ENST00000529545 ST18O60284 1047 aa10.97□□□□□ -0.65
VPS11-203ENST00000529545 VCAM1P19320 739 aa10.97□□□□□ -0.65
VPS11-203ENST00000529545 CYP7A1P22680 504 aa10.97□□□□□ -0.65
VPS11-203ENST00000529545 SMAD3P84022 425 aaKnown RBP10.97□□□□□ -0.65
VPS11-203ENST00000529545 ABCB5Q2M3G0 1257 aa10.97□□□□□ -0.65
VPS11-203ENST00000529545 CERKLQ49MI3 558 aaPredicted RBP10.97□□□□□ -0.65
VPS11-203ENST00000529545 POTEEQ6S8J3 1075 aa10.97□□□□□ -0.65
VPS11-203ENST00000529545 LBX2Q6XYB7 198 aa10.97□□□□□ -0.65
VPS11-203ENST00000529545 SLC39A5Q6ZMH5 540 aa10.97□□□□□ -0.65
VPS11-203ENST00000529545 ADGRA1Q86SQ6 560 aa10.97□□□□□ -0.65
VPS11-203ENST00000529545 TTC6Q86TZ1 520 aa10.97□□□□□ -0.65
VPS11-203ENST00000529545 NPLOC4Q8TAT6 608 aa10.97□□□□□ -0.65
VPS11-203ENST00000529545 BADQ92934 168 aa10.97□□□□□ -0.65
VPS11-203ENST00000529545 GPR108Q9NPR9 543 aa10.97□□□□□ -0.65
VPS11-203ENST00000529545 HOXC10Q9NYD6 342 aa10.97□□□□□ -0.65
VPS11-203ENST00000529545 BTBD7Q9P203 1132 aa10.97□□□□□ -0.65
VPS11-203ENST00000529545 LTBP2Q14767 1821 aa10.97□□□□□ -0.65
VPS11-203ENST00000529545 SEPT4O43236 478 aa10.96□□□□□ -0.65
VPS11-203ENST00000529545 IDH1O75874 414 aaKnown RBP10.96□□□□□ -0.65
VPS11-203ENST00000529545 CYP2E1P05181 493 aaPredicted RBP10.96□□□□□ -0.65
VPS11-203ENST00000529545 CYBAP13498 195 aa10.96□□□□□ -0.65
VPS11-203ENST00000529545 FOSL2P15408 326 aa10.96□□□□□ -0.65
VPS11-203ENST00000529545 DYNLL1P63167 89 aaKnown RBP10.96□□□□□ -0.65
VPS11-203ENST00000529545 TNNI3KQ59H18 835 aa10.96□□□□□ -0.65
VPS11-203ENST00000529545 OLFML2BQ68BL8 750 aa10.96□□□□□ -0.65
VPS11-203ENST00000529545 TATDN1Q6P1N9 297 aa10.96□□□□□ -0.65
VPS11-203ENST00000529545 MYLIPQ8WY64 445 aa10.96□□□□□ -0.65
VPS11-203ENST00000529545 EHD4Q9H223 541 aa10.96□□□□□ -0.65
VPS11-203ENST00000529545 RPAP3Q9H6T3 665 aaPredicted RBP10.96□□□□□ -0.65
VPS11-203ENST00000529545 PRDM6Q9NQX0 595 aa10.96□□□□□ -0.65
VPS11-203ENST00000529545 FPGT-TNNI3KV9GXZ4 949 aa10.96□□□□□ -0.65
VPS11-203ENST00000529545 RLFQ13129 1914 aa10.96□□□□□ -0.66
VPS11-203ENST00000529545 PNMA6EA0A0J9YXQ4 647 aa10.95□□□□□ -0.66
VPS11-203ENST00000529545 ZNF316A6NFI3 1004 aaPredicted RBP10.95□□□□□ -0.66
VPS11-203ENST00000529545 SPDYE16A6NNV3 312 aaPredicted RBP10.95□□□□□ -0.66
VPS11-203ENST00000529545 ADORA2AP29274 412 aa10.95□□□□□ -0.66
VPS11-203ENST00000529545 ADCYAP1R1P41586 468 aa10.95□□□□□ -0.66
VPS11-203ENST00000529545 ZAP70P43403 619 aa10.95□□□□□ -0.66
VPS11-203ENST00000529545 RARSP54136 660 aaKnown RBP10.95□□□□□ -0.66
VPS11-203ENST00000529545 COG2Q14746 738 aa10.95□□□□□ -0.66
VPS11-203ENST00000529545 TRIM60Q495X7 471 aa10.95□□□□□ -0.66
VPS11-203ENST00000529545 C9orf50Q5SZB4 431 aa10.95□□□□□ -0.66
VPS11-203ENST00000529545 ANO1Q5XXA6 986 aa10.95□□□□□ -0.66
VPS11-203ENST00000529545 TRMT2AQ8IZ69 625 aaKnown RBP10.95□□□□□ -0.66
VPS11-203ENST00000529545 MIGA1Q8NAN2 632 aa10.95□□□□□ -0.66
VPS11-203ENST00000529545 TRPV1Q8NER1 839 aa10.95□□□□□ -0.66
VPS11-203ENST00000529545 ACER1Q8TDN7 264 aa10.95□□□□□ -0.66
VPS11-203ENST00000529545 ZNF512BQ96KM6 892 aaPredicted RBP10.95□□□□□ -0.66
VPS11-203ENST00000529545 DBNDD2Q9BQY9 259 aa10.95□□□□□ -0.66
VPS11-203ENST00000529545 UNC80Q8N2C7 3258 aa10.95□□□□□ -0.66
VPS11-203ENST00000529545 MYO5AQ9Y4I1 1855 aaKnown RBP10.94□□□□□ -0.66
VPS11-203ENST00000529545 TMEM265A0A087WTH1 108 aa10.94□□□□□ -0.66
VPS11-203ENST00000529545 POLR3DP05423 398 aaPredicted RBP10.94□□□□□ -0.66
VPS11-203ENST00000529545 SNX17Q15036 470 aa10.94□□□□□ -0.66
VPS11-203ENST00000529545 TMED8Q6PL24 325 aaPredicted RBP10.94□□□□□ -0.66
VPS11-203ENST00000529545 MAGEB6Q8N7X4 407 aa10.94□□□□□ -0.66
VPS11-203ENST00000529545 SHCBP1Q8NEM2 672 aa10.94□□□□□ -0.66
VPS11-203ENST00000529545 FERMT2Q96AC1 680 aa10.94□□□□□ -0.66
VPS11-203ENST00000529545 RNPC3Q96LT9 517 aaKnown RBP10.94□□□□□ -0.66
VPS11-203ENST00000529545 MOV10L1Q9BXT6 1211 aaKnown RBP10.94□□□□□ -0.66
VPS11-203ENST00000529545 TANGO6Q9C0B7 1094 aa10.94□□□□□ -0.66
VPS11-203ENST00000529545 SPATC1LQ9H0A9 340 aa10.94□□□□□ -0.66
VPS11-203ENST00000529545 MROH8Q9H579 483 aa10.94□□□□□ -0.66
VPS11-203ENST00000529545 PIH1D3Q9NQM4 214 aaKnown RBP10.94□□□□□ -0.66
VPS11-203ENST00000529545 PDLIM7Q9NR12 457 aa10.94□□□□□ -0.66
VPS11-203ENST00000529545 TACC3Q9Y6A5 838 aa10.94□□□□□ -0.66
VPS11-203ENST00000529545 MPHOSPH10O00566 681 aaKnown RBP10.93□□□□□ -0.66
VPS11-203ENST00000529545 SURF6O75683 361 aaKnown RBP10.93□□□□□ -0.66
VPS11-203ENST00000529545 ERCC3P19447 782 aa10.93□□□□□ -0.66
VPS11-203ENST00000529545 MAP3K12Q12852 859 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms