RNA–Protein interactions for RNA: ENST00000529529.1

TRIM3-209, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-209ENST00000529529 MAP2K5Q13163 448 aa19.43■□□□□ 0.7
TRIM3-209ENST00000529529 KIAA1755Q5JYT7 1200 aa19.43■□□□□ 0.7
TRIM3-209ENST00000529529 CHRDL2Q6WN34 429 aa19.43■□□□□ 0.7
TRIM3-209ENST00000529529 C16orf86Q6ZW13 317 aa19.43■□□□□ 0.7
TRIM3-209ENST00000529529 KBTBD3Q8NAB2 608 aa19.43■□□□□ 0.7
TRIM3-209ENST00000529529 ANKLE1Q8NAG6 615 aa19.43■□□□□ 0.7
TRIM3-209ENST00000529529 DIS3LQ8TF46 1054 aaKnown RBP19.43■□□□□ 0.7
TRIM3-209ENST00000529529 STRBPQ96SI9 672 aaKnown RBP19.43■□□□□ 0.7
TRIM3-209ENST00000529529 TMX2Q9Y320 296 aa19.43■□□□□ 0.7
TRIM3-209ENST00000529529 DDX60LQ5H9U9 1706 aaKnown RBP19.42■□□□□ 0.7
TRIM3-209ENST00000529529 SLC15A5A6NIM6 579 aa19.42■□□□□ 0.7
TRIM3-209ENST00000529529 RNF113AO15541 343 aaKnown RBP19.42■□□□□ 0.7
TRIM3-209ENST00000529529 ICA1Q05084 483 aa19.42■□□□□ 0.7
TRIM3-209ENST00000529529 SPICE1Q8N0Z3 855 aa19.42■□□□□ 0.7
TRIM3-209ENST00000529529 APBA2Q99767 749 aa19.42■□□□□ 0.7
TRIM3-209ENST00000529529 SH2D4AQ9H788 454 aa19.42■□□□□ 0.7
TRIM3-209ENST00000529529 IVNS1ABPQ9Y6Y0 642 aa19.42■□□□□ 0.7
TRIM3-209ENST00000529529 PLXNB2O15031 1838 aa19.41■□□□□ 0.7
TRIM3-209ENST00000529529 ATP2B2Q01814 1243 aa19.41■□□□□ 0.7
TRIM3-209ENST00000529529 NBPF3Q9H094 633 aa19.41■□□□□ 0.7
TRIM3-209ENST00000529529 PCDH10Q9P2E7 1040 aa19.41■□□□□ 0.7
TRIM3-209ENST00000529529 OGDHLQ9ULD0 1010 aa19.41■□□□□ 0.7
TRIM3-209ENST00000529529 GSG1L2A8MUP6 293 aa19.4■□□□□ 0.7
TRIM3-209ENST00000529529 EEF2P13639 858 aaKnown RBP19.4■□□□□ 0.7
TRIM3-209ENST00000529529 CCND3P30281 292 aaPredicted RBP19.4■□□□□ 0.7
TRIM3-209ENST00000529529 DSG3P32926 999 aa19.4■□□□□ 0.7
TRIM3-209ENST00000529529 LPAR1Q92633 364 aa19.4■□□□□ 0.7
TRIM3-209ENST00000529529 OSBP2Q969R2 916 aa19.4■□□□□ 0.7
TRIM3-209ENST00000529529 MOV10L1Q9BXT6 1211 aaKnown RBP19.4■□□□□ 0.7
TRIM3-209ENST00000529529 VCPKMTQ9H867 229 aa19.4■□□□□ 0.7
TRIM3-209ENST00000529529 KANSL2Q9H9L4 492 aa19.4■□□□□ 0.7
TRIM3-209ENST00000529529 ARPP21Q9UBL0 812 aaPredicted RBP19.4■□□□□ 0.7
TRIM3-209ENST00000529529 MINDY4BA8MYZ0 360 aa19.39■□□□□ 0.69
TRIM3-209ENST00000529529 FLOT1O75955 427 aa19.39■□□□□ 0.69
TRIM3-209ENST00000529529 MNX1P50219 401 aaPredicted RBP19.39■□□□□ 0.69
TRIM3-209ENST00000529529 FXR1P51114 621 aaKnown RBP eCLIP19.39■□□□□ 0.69
TRIM3-209ENST00000529529 MFSD14CQ5VZR4 134 aa19.39■□□□□ 0.69
TRIM3-209ENST00000529529 SAMD1Q6SPF0 538 aaPredicted RBP19.39■□□□□ 0.69
TRIM3-209ENST00000529529 STK11IPQ8N1F8 1099 aa19.39■□□□□ 0.69
TRIM3-209ENST00000529529 APPBP2Q92624 585 aa19.39■□□□□ 0.69
TRIM3-209ENST00000529529 FLRT1Q9NZU1 646 aa19.39■□□□□ 0.69
TRIM3-209ENST00000529529 ZFYP08048 801 aaPredicted RBP19.38■□□□□ 0.69
TRIM3-209ENST00000529529 GRB14Q14449 540 aa19.38■□□□□ 0.69
TRIM3-209ENST00000529529 PLS1Q14651 629 aa19.38■□□□□ 0.69
TRIM3-209ENST00000529529 SBK1Q52WX2 424 aa19.38■□□□□ 0.69
TRIM3-209ENST00000529529 GIMAP6Q6P9H5 292 aa19.38■□□□□ 0.69
TRIM3-209ENST00000529529 DPP9Q86TI2 863 aa19.38■□□□□ 0.69
TRIM3-209ENST00000529529 SPATC1LQ9H0A9 340 aa19.38■□□□□ 0.69
TRIM3-209ENST00000529529 C11orf49Q9H6J7 331 aa19.38■□□□□ 0.69
TRIM3-209ENST00000529529 RBM27Q9P2N5 1060 aaKnown RBP19.38■□□□□ 0.69
TRIM3-209ENST00000529529 TTC41PQ6P2S7 1318 aa19.37■□□□□ 0.69
TRIM3-209ENST00000529529 WDR46O15213 610 aaKnown RBP19.37■□□□□ 0.69
TRIM3-209ENST00000529529 STRNO43815 780 aa19.37■□□□□ 0.69
TRIM3-209ENST00000529529 RAD21O60216 631 aa19.37■□□□□ 0.69
TRIM3-209ENST00000529529 APPP05067 770 aa19.37■□□□□ 0.69
TRIM3-209ENST00000529529 HOXC6P09630 235 aa19.37■□□□□ 0.69
TRIM3-209ENST00000529529 RRP1P56182 461 aaKnown RBP19.37■□□□□ 0.69
TRIM3-209ENST00000529529 LHX8Q68G74 356 aa19.37■□□□□ 0.69
TRIM3-209ENST00000529529 MB21D1Q8N884 522 aa19.37■□□□□ 0.69
TRIM3-209ENST00000529529 NPLOC4Q8TAT6 608 aa19.37■□□□□ 0.69
TRIM3-209ENST00000529529 OTUD7AQ8TE49 926 aaPredicted RBP19.37■□□□□ 0.69
TRIM3-209ENST00000529529 ATG4CQ96DT6 458 aa19.37■□□□□ 0.69
TRIM3-209ENST00000529529 MKNK2Q9HBH9 465 aa19.37■□□□□ 0.69
TRIM3-209ENST00000529529 M0R2C6 588 aa19.36■□□□□ 0.69
TRIM3-209ENST00000529529 ERC2O15083 957 aa19.36■□□□□ 0.69
TRIM3-209ENST00000529529 GPAA1O43292 621 aa19.36■□□□□ 0.69
TRIM3-209ENST00000529529 ERCC3P19447 782 aa19.36■□□□□ 0.69
TRIM3-209ENST00000529529 LRRFIP1Q32MZ4 808 aaKnown RBP19.36■□□□□ 0.69
TRIM3-209ENST00000529529 SHCBP1Q8NEM2 672 aa19.36■□□□□ 0.69
TRIM3-209ENST00000529529 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.36■□□□□ 0.69
TRIM3-209ENST00000529529 GNAT2P19087 354 aa19.35■□□□□ 0.69
TRIM3-209ENST00000529529 RASA1P20936 1047 aa19.35■□□□□ 0.69
TRIM3-209ENST00000529529 CNGA1P29973 690 aa19.35■□□□□ 0.69
TRIM3-209ENST00000529529 CYP2C19P33261 490 aa19.35■□□□□ 0.69
TRIM3-209ENST00000529529 NCAPG2Q86XI2 1143 aa19.35■□□□□ 0.69
TRIM3-209ENST00000529529 PI4K2BQ8TCG2 481 aa19.35■□□□□ 0.69
TRIM3-209ENST00000529529 MROH8Q9H579 483 aa19.35■□□□□ 0.69
TRIM3-209ENST00000529529 GOPCQ9HD26 462 aa19.35■□□□□ 0.69
TRIM3-209ENST00000529529 BAZ2AQ9UIF9 1905 aaKnown RBP19.35■□□□□ 0.69
TRIM3-209ENST00000529529 CEP290O15078 2479 aa19.34■□□□□ 0.69
TRIM3-209ENST00000529529 PATL2C9JE40 543 aaKnown RBP19.34■□□□□ 0.69
TRIM3-209ENST00000529529 ADORA2AP29274 412 aa19.34■□□□□ 0.69
TRIM3-209ENST00000529529 TDO2P48775 406 aa19.34■□□□□ 0.69
TRIM3-209ENST00000529529 C7orf61Q8IZ16 206 aa19.34■□□□□ 0.69
TRIM3-209ENST00000529529 CRBNQ96SW2 442 aa19.34■□□□□ 0.69
TRIM3-209ENST00000529529 SEC62Q99442 399 aaKnown RBP19.34■□□□□ 0.69
TRIM3-209ENST00000529529 FBXO28Q9NVF7 368 aa19.34■□□□□ 0.69
TRIM3-209ENST00000529529 COBLO75128 1261 aa19.33■□□□□ 0.68
TRIM3-209ENST00000529529 TMEM132BQ14DG7 1078 aa19.33■□□□□ 0.68
TRIM3-209ENST00000529529 IFNL3Q8IZI9 196 aa19.33■□□□□ 0.68
TRIM3-209ENST00000529529 ZNF444Q8N0Y2 327 aaPredicted RBP19.33■□□□□ 0.68
TRIM3-209ENST00000529529 FSD1Q9BTV5 496 aa19.33■□□□□ 0.68
TRIM3-209ENST00000529529 PRO3102Q9H379 93 aa19.33■□□□□ 0.68
TRIM3-209ENST00000529529 EPB41L4AQ9HCS5 686 aaPredicted RBP19.33■□□□□ 0.68
TRIM3-209ENST00000529529 ZBTB47Q9UFB7 747 aaPredicted RBP19.33■□□□□ 0.68
TRIM3-209ENST00000529529 STAP2Q9UGK3 403 aa19.33■□□□□ 0.68
TRIM3-209ENST00000529529 ADAMTS5Q9UNA0 930 aa19.33■□□□□ 0.68
TRIM3-209ENST00000529529 MX1P20591 662 aa19.32■□□□□ 0.68
TRIM3-209ENST00000529529 FAM83BQ5T0W9 1011 aa19.32■□□□□ 0.68
TRIM3-209ENST00000529529 ANKRD45Q5TZF3 282 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms