RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 SEPT2Q15019 361 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 Q3C1V9 767 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 LBX2Q6XYB7 198 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 KBTBD3Q8NAB2 608 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 SDR42E1Q8WUS8 393 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 LPAR1Q92633 364 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 EDC3Q96F86 508 aaKnown RBP9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 NACAP1Q9BZK3 213 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 UNC93B1Q9H1C4 597 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 OCEL1Q9H607 264 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 KANSL2Q9H9L4 492 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 SLC5A4Q9NY91 659 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 IVNS1ABPQ9Y6Y0 642 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 PRKAB2O43741 272 aa9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 CYP2B6P20813 491 aa9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 CDK8P49336 464 aa9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 ZYXQ15942 572 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 SBK1Q52WX2 424 aa9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 ZNF444Q8N0Y2 327 aaPredicted RBP9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 MB21D1Q8N884 522 aa9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 ANKLE1Q8NAG6 615 aa9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 ACER1Q8TDN7 264 aa9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 MARVELD3Q96A59 401 aa9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 DEFB118Q96PH6 123 aa9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 STRBPQ96SI9 672 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 PAGR1Q9BTK6 254 aa9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 MKNK2Q9HBH9 465 aa9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 ARPP21Q9UBL0 812 aaPredicted RBP9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 TMX2Q9Y320 296 aa9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 DOCK1Q14185 1865 aa9.38□□□□□ -0.91
CCDC90B-212ENST00000529312 SLC15A5A6NIM6 579 aa9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 PATL2C9JE40 543 aaKnown RBP9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 FARP2O94887 1054 aaPredicted RBP9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 SLC34A2O95436 690 aa9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 APPP05067 770 aa9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 SLC3A2P08195 630 aaKnown RBP9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 VCAM1P19320 739 aa9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 GUCY1A2P33402 732 aa9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 ATP2B2Q01814 1243 aa9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 MAP2K5Q13163 448 aa9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 MFSD14CQ5VZR4 134 aa9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 CTR9Q6PD62 1173 aa9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 C16orf86Q6ZW13 317 aa9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 GPR142Q7Z601 462 aa9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 NECAB2Q7Z6G3 386 aa9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 TICAM2Q86XR7 235 aa9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 APPBP2Q92624 585 aa9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 CRISPLD2Q9H0B8 497 aa9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 PUS7LQ9H0K6 701 aaKnown RBP9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 RPAP3Q9H6T3 665 aaPredicted RBP9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 TXNRD2Q9NNW7 524 aa9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 PAK6Q9NQU5 681 aaPredicted RBP9.37□□□□□ -0.91
CCDC90B-212ENST00000529312 MINDY4BA8MYZ0 360 aa9.36□□□□□ -0.91
CCDC90B-212ENST00000529312 ZKSCAN1P17029 563 aaPredicted RBP9.36□□□□□ -0.91
CCDC90B-212ENST00000529312 PTPREP23469 700 aa9.36□□□□□ -0.91
CCDC90B-212ENST00000529312 ICA1Q05084 483 aa9.36□□□□□ -0.91
CCDC90B-212ENST00000529312 PPP4R3BQ5MIZ7 849 aa9.36□□□□□ -0.91
CCDC90B-212ENST00000529312 ANKRD45Q5TZF3 282 aa9.36□□□□□ -0.91
CCDC90B-212ENST00000529312 WDR78Q5VTH9 848 aa9.36□□□□□ -0.91
CCDC90B-212ENST00000529312 DPP9Q86TI2 863 aa9.36□□□□□ -0.91
CCDC90B-212ENST00000529312 SHCBP1Q8NEM2 672 aa9.36□□□□□ -0.91
CCDC90B-212ENST00000529312 DYNLL2Q96FJ2 89 aa9.36□□□□□ -0.91
CCDC90B-212ENST00000529312 TANGO6Q9C0B7 1094 aa9.36□□□□□ -0.91
CCDC90B-212ENST00000529312 RWDD1Q9H446 243 aaPredicted RBP9.36□□□□□ -0.91
CCDC90B-212ENST00000529312 MROH8Q9H579 483 aa9.36□□□□□ -0.91
CCDC90B-212ENST00000529312 GOPCQ9HD26 462 aa9.36□□□□□ -0.91
CCDC90B-212ENST00000529312 PCDHB15Q9Y5E8 787 aa9.36□□□□□ -0.91
CCDC90B-212ENST00000529312 MYH1P12882 1939 aa9.35□□□□□ -0.91
CCDC90B-212ENST00000529312 GSG1L2A8MUP6 293 aa9.35□□□□□ -0.91
CCDC90B-212ENST00000529312 WDR46O15213 610 aaKnown RBP9.35□□□□□ -0.91
CCDC90B-212ENST00000529312 EVI5O60447 810 aa9.35□□□□□ -0.91
CCDC90B-212ENST00000529312 FLOT1O75955 427 aa9.35□□□□□ -0.91
CCDC90B-212ENST00000529312 SLC25A27O95847 323 aa9.35□□□□□ -0.91
CCDC90B-212ENST00000529312 CYP2D6P10635 497 aa9.35□□□□□ -0.91
CCDC90B-212ENST00000529312 RRP1P56182 461 aaKnown RBP9.35□□□□□ -0.91
CCDC90B-212ENST00000529312 PDE4BQ07343 736 aa9.35□□□□□ -0.91
CCDC90B-212ENST00000529312 SHROOM1Q2M3G4 852 aaPredicted RBP9.35□□□□□ -0.91
CCDC90B-212ENST00000529312 HABP4Q5JVS0 413 aaKnown RBP9.35□□□□□ -0.91
CCDC90B-212ENST00000529312 MORN1Q5T089 497 aa9.35□□□□□ -0.91
CCDC90B-212ENST00000529312 DOCK3Q8IZD9 2030 aa9.35□□□□□ -0.91
CCDC90B-212ENST00000529312 USP6NLQ92738 828 aa9.35□□□□□ -0.91
CCDC90B-212ENST00000529312 NBPF3Q9H094 633 aa9.35□□□□□ -0.91
CCDC90B-212ENST00000529312 VCPKMTQ9H867 229 aa9.35□□□□□ -0.91
CCDC90B-212ENST00000529312 PHIPQ8WWQ0 1821 aa9.34□□□□□ -0.91
CCDC90B-212ENST00000529312 A0A1W2PRG0 241 aa9.34□□□□□ -0.91
CCDC90B-212ENST00000529312 SPDYE16A6NNV3 312 aaPredicted RBP9.34□□□□□ -0.91
CCDC90B-212ENST00000529312 H0YGN5 161 aa9.34□□□□□ -0.91
CCDC90B-212ENST00000529312 GPAA1O43292 621 aa9.34□□□□□ -0.91
CCDC90B-212ENST00000529312 MSCO60682 206 aa9.34□□□□□ -0.91
CCDC90B-212ENST00000529312 HOXC6P09630 235 aa9.34□□□□□ -0.91
CCDC90B-212ENST00000529312 EEF2P13639 858 aaKnown RBP9.34□□□□□ -0.91
CCDC90B-212ENST00000529312 AKR1B1P15121 316 aa9.34□□□□□ -0.91
CCDC90B-212ENST00000529312 COPB2P35606 906 aa9.34□□□□□ -0.91
CCDC90B-212ENST00000529312 TDO2P48775 406 aa9.34□□□□□ -0.91
CCDC90B-212ENST00000529312 HDAC1Q13547 482 aaPredicted RBP9.34□□□□□ -0.91
CCDC90B-212ENST00000529312 UBE2Q1Q7Z7E8 422 aa9.34□□□□□ -0.91
CCDC90B-212ENST00000529312 SIAH1Q8IUQ4 282 aa9.34□□□□□ -0.91
CCDC90B-212ENST00000529312 IFNL3Q8IZI9 196 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms