RNA–Protein interactions for RNA: ENST00000528935.1

PACS1-207, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-207ENST00000528935 NUDT12Q9BQG2 462 aa17.41■□□□□ 0.38
PACS1-207ENST00000528935 KANSL2Q9H9L4 492 aa17.41■□□□□ 0.38
PACS1-207ENST00000528935 HOXC10Q9NYD6 342 aa17.41■□□□□ 0.38
PACS1-207ENST00000528935 STAP2Q9UGK3 403 aa17.41■□□□□ 0.38
PACS1-207ENST00000528935 SPDYE16A6NNV3 312 aaPredicted RBP17.4■□□□□ 0.38
PACS1-207ENST00000528935 MINDY4BA8MYZ0 360 aa17.4■□□□□ 0.38
PACS1-207ENST00000528935 PATL2C9JE40 543 aaKnown RBP17.4■□□□□ 0.38
PACS1-207ENST00000528935 SGPL1O95470 568 aa17.4■□□□□ 0.38
PACS1-207ENST00000528935 HMGCRP04035 888 aa17.4■□□□□ 0.38
PACS1-207ENST00000528935 APPP05067 770 aa17.4■□□□□ 0.38
PACS1-207ENST00000528935 XRCC5P13010 732 aaKnown RBP17.4■□□□□ 0.38
PACS1-207ENST00000528935 CAPN2P17655 700 aa17.4■□□□□ 0.38
PACS1-207ENST00000528935 GPR142Q7Z601 462 aa17.4■□□□□ 0.38
PACS1-207ENST00000528935 PLEKHH3Q7Z736 793 aa17.4■□□□□ 0.38
PACS1-207ENST00000528935 CLEC10AQ8IUN9 316 aa17.4■□□□□ 0.38
PACS1-207ENST00000528935 EEF2P13639 858 aaKnown RBP17.39■□□□□ 0.37
PACS1-207ENST00000528935 CYP2B6P20813 491 aa17.39■□□□□ 0.37
PACS1-207ENST00000528935 TDO2P48775 406 aa17.39■□□□□ 0.37
PACS1-207ENST00000528935 KIAA1755Q5JYT7 1200 aa17.39■□□□□ 0.37
PACS1-207ENST00000528935 ZMYM1Q5SVZ6 1142 aa17.39■□□□□ 0.37
PACS1-207ENST00000528935 MORN1Q5T089 497 aa17.39■□□□□ 0.37
PACS1-207ENST00000528935 USP6NLQ92738 828 aa17.39■□□□□ 0.37
PACS1-207ENST00000528935 SEC62Q99442 399 aaKnown RBP17.39■□□□□ 0.37
PACS1-207ENST00000528935 TANGO6Q9C0B7 1094 aa17.39■□□□□ 0.37
PACS1-207ENST00000528935 VCPKMTQ9H867 229 aa17.39■□□□□ 0.37
PACS1-207ENST00000528935 MKNK2Q9HBH9 465 aa17.39■□□□□ 0.37
PACS1-207ENST00000528935 CWC22Q9HCG8 908 aaKnown RBP17.39■□□□□ 0.37
PACS1-207ENST00000528935 EPB41L4AQ9HCS5 686 aaPredicted RBP17.39■□□□□ 0.37
PACS1-207ENST00000528935 PAK6Q9NQU5 681 aaPredicted RBP17.39■□□□□ 0.37
PACS1-207ENST00000528935 BTBD7Q9P203 1132 aa17.39■□□□□ 0.37
PACS1-207ENST00000528935 BRCA2P51587 3418 aa17.39■□□□□ 0.37
PACS1-207ENST00000528935 MYH8P13535 1937 aa17.39■□□□□ 0.37
PACS1-207ENST00000528935 PDE1AP54750 535 aa17.38■□□□□ 0.37
PACS1-207ENST00000528935 TRMT44Q8IYL2 757 aaKnown RBP17.38■□□□□ 0.37
PACS1-207ENST00000528935 IFNL3Q8IZI9 196 aa17.38■□□□□ 0.37
PACS1-207ENST00000528935 SPICE1Q8N0Z3 855 aa17.38■□□□□ 0.37
PACS1-207ENST00000528935 TRIB2Q92519 343 aa17.38■□□□□ 0.37
PACS1-207ENST00000528935 DEFB118Q96PH6 123 aa17.38■□□□□ 0.37
PACS1-207ENST00000528935 NACAP1Q9BZK3 213 aa17.38■□□□□ 0.37
PACS1-207ENST00000528935 ROBO3Q96MS0 1386 aa17.38■□□□□ 0.37
PACS1-207ENST00000528935 TFRCP02786 760 aaKnown RBP17.37■□□□□ 0.37
PACS1-207ENST00000528935 RASA1P20936 1047 aa17.37■□□□□ 0.37
PACS1-207ENST00000528935 RGS2P41220 211 aa17.37■□□□□ 0.37
PACS1-207ENST00000528935 ATP2B2Q01814 1243 aa17.37■□□□□ 0.37
PACS1-207ENST00000528935 UBE2Q1Q7Z7E8 422 aa17.37■□□□□ 0.37
PACS1-207ENST00000528935 SMC5Q8IY18 1101 aa17.37■□□□□ 0.37
PACS1-207ENST00000528935 STK11IPQ8N1F8 1099 aa17.37■□□□□ 0.37
PACS1-207ENST00000528935 EVI5LQ96CN4 794 aa17.37■□□□□ 0.37
PACS1-207ENST00000528935 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.37■□□□□ 0.37
PACS1-207ENST00000528935 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.37■□□□□ 0.37
PACS1-207ENST00000528935 ZNF287Q9HBT7 754 aa17.37■□□□□ 0.37
PACS1-207ENST00000528935 RPTORQ8N122 1335 aa17.37■□□□□ 0.37
PACS1-207ENST00000528935 PLXNB2O15031 1838 aa17.37■□□□□ 0.37
PACS1-207ENST00000528935 WDR46O15213 610 aaKnown RBP17.36■□□□□ 0.37
PACS1-207ENST00000528935 DSG3P32926 999 aa17.36■□□□□ 0.37
PACS1-207ENST00000528935 TRIM32Q13049 653 aa17.36■□□□□ 0.37
PACS1-207ENST00000528935 WDR78Q5VTH9 848 aa17.36■□□□□ 0.37
PACS1-207ENST00000528935 MB21D1Q8N884 522 aa17.36■□□□□ 0.37
PACS1-207ENST00000528935 CRISPLD2Q9H0B8 497 aa17.36■□□□□ 0.37
PACS1-207ENST00000528935 GOPCQ9HD26 462 aa17.36■□□□□ 0.37
PACS1-207ENST00000528935 HMX1Q9NP08 348 aaPredicted RBP17.36■□□□□ 0.37
PACS1-207ENST00000528935 SLC15A5A6NIM6 579 aa17.35■□□□□ 0.37
PACS1-207ENST00000528935 FLOT1O75955 427 aa17.35■□□□□ 0.37
PACS1-207ENST00000528935 ZKSCAN1P17029 563 aaPredicted RBP17.35■□□□□ 0.37
PACS1-207ENST00000528935 PTPREP23469 700 aa17.35■□□□□ 0.37
PACS1-207ENST00000528935 MAP2K5Q13163 448 aa17.35■□□□□ 0.37
PACS1-207ENST00000528935 MAP3K21Q5TCX8 1036 aa17.35■□□□□ 0.37
PACS1-207ENST00000528935 ZNF444Q8N0Y2 327 aaPredicted RBP17.35■□□□□ 0.37
PACS1-207ENST00000528935 APBA2Q99767 749 aa17.35■□□□□ 0.37
PACS1-207ENST00000528935 LNPKQ9C0E8 428 aa17.35■□□□□ 0.37
PACS1-207ENST00000528935 IVNS1ABPQ9Y6Y0 642 aa17.35■□□□□ 0.37
PACS1-207ENST00000528935 MKI67P46013 3256 aaKnown RBP17.35■□□□□ 0.37
PACS1-207ENST00000528935 FARP2O94887 1054 aaPredicted RBP17.34■□□□□ 0.37
PACS1-207ENST00000528935 IGHDP01880 384 aa17.34■□□□□ 0.37
PACS1-207ENST00000528935 TICAM2Q86XR7 235 aa17.34■□□□□ 0.37
PACS1-207ENST00000528935 MOV10L1Q9BXT6 1211 aaKnown RBP17.34■□□□□ 0.37
PACS1-207ENST00000528935 SPATC1LQ9H0A9 340 aa17.34■□□□□ 0.37
PACS1-207ENST00000528935 NAPBQ9H115 298 aa17.34■□□□□ 0.37
PACS1-207ENST00000528935 NYAP2Q9P242 653 aa17.34■□□□□ 0.37
PACS1-207ENST00000528935 PRDM1O75626 825 aa17.33■□□□□ 0.36
PACS1-207ENST00000528935 SLC3A2P08195 630 aaKnown RBP17.33■□□□□ 0.36
PACS1-207ENST00000528935 PRKAR2AP13861 404 aaKnown RBP17.33■□□□□ 0.36
PACS1-207ENST00000528935 PDE4BQ07343 736 aa17.33■□□□□ 0.36
PACS1-207ENST00000528935 GRB14Q14449 540 aa17.33■□□□□ 0.36
PACS1-207ENST00000528935 CCL14Q16627 93 aa17.33■□□□□ 0.36
PACS1-207ENST00000528935 SHCBP1Q8NEM2 672 aa17.33■□□□□ 0.36
PACS1-207ENST00000528935 ATG4CQ96DT6 458 aa17.33■□□□□ 0.36
PACS1-207ENST00000528935 HTATIP2Q9BUP3 242 aa17.33■□□□□ 0.36
PACS1-207ENST00000528935 HELLSQ9NRZ9 838 aa17.33■□□□□ 0.36
PACS1-207ENST00000528935 RLFQ13129 1914 aa17.32■□□□□ 0.36
PACS1-207ENST00000528935 IGKV6D-41A0A0C4DH26 115 aa17.32■□□□□ 0.36
PACS1-207ENST00000528935 STRNO43815 780 aa17.32■□□□□ 0.36
PACS1-207ENST00000528935 RAD21O60216 631 aa17.32■□□□□ 0.36
PACS1-207ENST00000528935 HOXC6P09630 235 aa17.32■□□□□ 0.36
PACS1-207ENST00000528935 PPARAQ07869 468 aa17.32■□□□□ 0.36
PACS1-207ENST00000528935 CACNB2Q08289 660 aaPredicted RBP17.32■□□□□ 0.36
PACS1-207ENST00000528935 CCDC129Q6ZRS4 1044 aa17.32■□□□□ 0.36
PACS1-207ENST00000528935 CHD1LQ86WJ1 897 aa17.32■□□□□ 0.36
PACS1-207ENST00000528935 DPF3Q92784 378 aa17.32■□□□□ 0.36
PACS1-207ENST00000528935 TSHZ2Q9NRE2 1034 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms