RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 ANTXR2P58335 489 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 FKBP1AP62942 108 aaKnown RBP13.61□□□□□ -0.23
USF1-208ENST00000528768 GTF2IP78347 998 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 PPP2R5BQ15173 497 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 TPRNQ4KMQ1 711 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 GPR153Q6NV75 609 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 GIMAP6Q6P9H5 292 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 SASS6Q6UVJ0 657 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 SGMS1Q86VZ5 419 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 TBC1D10CQ8IV04 446 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 RNF214Q8ND24 703 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 STAG1Q8WVM7 1258 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 OPTNQ96CV9 577 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 CLSTN2Q9H4D0 955 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 ABCF2Q9UG63 623 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 SLC12A7Q9Y666 1083 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 ECM29Q5VYK3 1845 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 DOCK2Q92608 1830 aa13.6□□□□□ -0.23
USF1-208ENST00000528768 CCL15-CCL14A0A0B4J2E2 113 aa13.6□□□□□ -0.23
USF1-208ENST00000528768 SPDYE2BA6NHP3 402 aa13.6□□□□□ -0.23
USF1-208ENST00000528768 GOLGA8AA7E2F4 631 aa13.6□□□□□ -0.23
USF1-208ENST00000528768 GSG1L2A8MUP6 293 aa13.6□□□□□ -0.23
USF1-208ENST00000528768 B4E1Z4 1266 aa13.6□□□□□ -0.23
USF1-208ENST00000528768 TLR2O60603 784 aa13.6□□□□□ -0.23
USF1-208ENST00000528768 SLC3A2P08195 630 aaKnown RBP13.6□□□□□ -0.23
USF1-208ENST00000528768 SPDYE6P0CI01 402 aa13.6□□□□□ -0.23
USF1-208ENST00000528768 HOXD10P28358 340 aa13.6□□□□□ -0.23
USF1-208ENST00000528768 LACTBP83111 547 aaPredicted RBP13.6□□□□□ -0.23
USF1-208ENST00000528768 CAP1Q01518 475 aa13.6□□□□□ -0.23
USF1-208ENST00000528768 GNL2Q13823 731 aaKnown RBP13.6□□□□□ -0.23
USF1-208ENST00000528768 SF3A1Q15459 793 aaKnown RBP13.6□□□□□ -0.23
USF1-208ENST00000528768 CCL15Q16663 113 aa13.6□□□□□ -0.23
USF1-208ENST00000528768 NBPF12Q5TAG4 269 aaPredicted RBP13.6□□□□□ -0.23
USF1-208ENST00000528768 FAM173BQ6P4H8 233 aa13.6□□□□□ -0.23
USF1-208ENST00000528768 FBXO18Q8NFZ0 1043 aa13.6□□□□□ -0.23
USF1-208ENST00000528768 KCNG4Q8TDN1 519 aa13.6□□□□□ -0.23
USF1-208ENST00000528768 SH3TC2Q8TF17 1288 aa13.6□□□□□ -0.23
USF1-208ENST00000528768 TOMM22Q9NS69 142 aa13.6□□□□□ -0.23
USF1-208ENST00000528768 WTIPA6NIX2 430 aaPredicted RBP13.59□□□□□ -0.23
USF1-208ENST00000528768 YEATS4O95619 227 aa13.59□□□□□ -0.23
USF1-208ENST00000528768 TPM3P06753 285 aa13.59□□□□□ -0.23
USF1-208ENST00000528768 HIBADHP31937 336 aaKnown RBP13.59□□□□□ -0.23
USF1-208ENST00000528768 GYG1P46976 350 aa13.59□□□□□ -0.23
USF1-208ENST00000528768 GJA8P48165 433 aa13.59□□□□□ -0.23
USF1-208ENST00000528768 SSRP1Q08945 709 aaKnown RBP13.59□□□□□ -0.23
USF1-208ENST00000528768 WTAPQ15007 396 aa13.59□□□□□ -0.23
USF1-208ENST00000528768 CYB5R4Q7L1T6 521 aa13.59□□□□□ -0.23
USF1-208ENST00000528768 FBXO33Q7Z6M2 555 aa13.59□□□□□ -0.23
USF1-208ENST00000528768 TRIM22Q8IYM9 498 aa13.59□□□□□ -0.23
USF1-208ENST00000528768 BRI3BPQ8WY22 251 aa13.59□□□□□ -0.23
USF1-208ENST00000528768 ESR2Q92731 530 aa13.59□□□□□ -0.23
USF1-208ENST00000528768 UBAC1Q9BSL1 405 aa13.59□□□□□ -0.23
USF1-208ENST00000528768 ELP3Q9H9T3 547 aa13.59□□□□□ -0.23
USF1-208ENST00000528768 VEZTQ9HBM0 779 aa13.59□□□□□ -0.23
USF1-208ENST00000528768 DACT1Q9NYF0 836 aa13.59□□□□□ -0.23
USF1-208ENST00000528768 RTEL1Q9NZ71 1219 aa13.59□□□□□ -0.23
USF1-208ENST00000528768 STK36Q9NRP7 1315 aa13.59□□□□□ -0.23
USF1-208ENST00000528768 KINO60870 393 aaKnown RBP13.58□□□□□ -0.24
USF1-208ENST00000528768 KDM4AO75164 1064 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 MYCP01106 439 aaPredicted RBP13.58□□□□□ -0.24
USF1-208ENST00000528768 GJB1P08034 283 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 CETPP11597 493 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 FOSBP53539 338 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 RASA3Q14644 834 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 STK38Q15208 465 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 SAFBQ15424 915 aaKnown RBP eCLIP13.58□□□□□ -0.24
USF1-208ENST00000528768 CFAP100Q494V2 611 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 APOA5Q6Q788 366 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 UBE2Q1Q7Z7E8 422 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 TXNRD3Q86VQ6 643 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 LCORLQ8N3X6 602 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 IGDCC4Q8TDY8 1250 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 SHISA4Q96DD7 197 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 FAM84BQ96KN1 310 aaPredicted RBP13.58□□□□□ -0.24
USF1-208ENST00000528768 ALG1Q9BT22 464 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 EPB41L4AQ9HCS5 686 aaPredicted RBP13.58□□□□□ -0.24
USF1-208ENST00000528768 CD209Q9NNX6 404 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 ANAPC4Q9UJX5 808 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 CSADQ9Y600 493 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 COL6A3P12111 3177 aa13.58□□□□□ -0.24
USF1-208ENST00000528768 GOLGA6L6A8MZA4 724 aa13.57□□□□□ -0.24
USF1-208ENST00000528768 SNAP23O00161 211 aa13.57□□□□□ -0.24
USF1-208ENST00000528768 DTNBO60941 627 aa13.57□□□□□ -0.24
USF1-208ENST00000528768 FDPSP14324 419 aaKnown RBP13.57□□□□□ -0.24
USF1-208ENST00000528768 LIG1P18858 919 aa13.57□□□□□ -0.24
USF1-208ENST00000528768 ME1P48163 572 aa13.57□□□□□ -0.24
USF1-208ENST00000528768 MAP3K9P80192 1104 aa13.57□□□□□ -0.24
USF1-208ENST00000528768 PPARAQ07869 468 aa13.57□□□□□ -0.24
USF1-208ENST00000528768 C15orf52Q6ZUT6 534 aaKnown RBP13.57□□□□□ -0.24
USF1-208ENST00000528768 CCAR1Q8IX12 1150 aaKnown RBP13.57□□□□□ -0.24
USF1-208ENST00000528768 FAM200AQ8TCP9 573 aa13.57□□□□□ -0.24
USF1-208ENST00000528768 FUCA2Q9BTY2 467 aa13.57□□□□□ -0.24
USF1-208ENST00000528768 CRNKL1Q9BZJ0 848 aaKnown RBP13.57□□□□□ -0.24
USF1-208ENST00000528768 NBPF3Q9H094 633 aa13.57□□□□□ -0.24
USF1-208ENST00000528768 LY9Q9HBG7 655 aa13.57□□□□□ -0.24
USF1-208ENST00000528768 RRAGDQ9NQL2 400 aaPredicted RBP13.57□□□□□ -0.24
USF1-208ENST00000528768 GPHNQ9NQX3 736 aaPredicted RBP13.57□□□□□ -0.24
USF1-208ENST00000528768 NEDD4P46934 1319 aa13.57□□□□□ -0.24
USF1-208ENST00000528768 A0A1W2PQ27 194 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 A0A1W2PQ64 194 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms