RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 ZSWIM8A7E2V4 1837 aa17.02■□□□□ 0.31
CAPN1-216ENST00000528739 BAZ2AQ9UIF9 1905 aaKnown RBP17.02■□□□□ 0.31
CAPN1-216ENST00000528739 DDX60LQ5H9U9 1706 aaKnown RBP17.01■□□□□ 0.31
CAPN1-216ENST00000528739 EN2P19622 333 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-216ENST00000528739 RASA1P20936 1047 aa17.01■□□□□ 0.31
CAPN1-216ENST00000528739 PPARAQ07869 468 aa17.01■□□□□ 0.31
CAPN1-216ENST00000528739 NMIQ13287 307 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-216ENST00000528739 COG2Q14746 738 aa17.01■□□□□ 0.31
CAPN1-216ENST00000528739 MTFR1Q15390 333 aa17.01■□□□□ 0.31
CAPN1-216ENST00000528739 LPAR1Q92633 364 aa17.01■□□□□ 0.31
CAPN1-216ENST00000528739 VCPKMTQ9H867 229 aa17.01■□□□□ 0.31
CAPN1-216ENST00000528739 TOMM22Q9NS69 142 aa17.01■□□□□ 0.31
CAPN1-216ENST00000528739 RABGAP1Q9Y3P9 1069 aa17.01■□□□□ 0.31
CAPN1-216ENST00000528739 LOC285556D6RIA3 1793 aa17■□□□□ 0.31
CAPN1-216ENST00000528739 FLOT1O75955 427 aa17■□□□□ 0.31
CAPN1-216ENST00000528739 TSPY3P0CV98 308 aa17■□□□□ 0.31
CAPN1-216ENST00000528739 TSPY8P0CW00 308 aa17■□□□□ 0.31
CAPN1-216ENST00000528739 CYP2B6P20813 491 aa17■□□□□ 0.31
CAPN1-216ENST00000528739 MAPK4P31152 587 aa17■□□□□ 0.31
CAPN1-216ENST00000528739 CTDSPL2Q05D32 466 aa17■□□□□ 0.31
CAPN1-216ENST00000528739 PLS1Q14651 629 aa17■□□□□ 0.31
CAPN1-216ENST00000528739 VPS53Q5VIR6 699 aa17■□□□□ 0.31
CAPN1-216ENST00000528739 NUDT12Q9BQG2 462 aa17■□□□□ 0.31
CAPN1-216ENST00000528739 RNF208Q9H0X6 261 aa17■□□□□ 0.31
CAPN1-216ENST00000528739 DIAPH3Q9NSV4 1193 aa17■□□□□ 0.31
CAPN1-216ENST00000528739 CLIP2Q9UDT6 1046 aa17■□□□□ 0.31
CAPN1-216ENST00000528739 ISY1Q9ULR0 285 aaKnown RBP17■□□□□ 0.31
CAPN1-216ENST00000528739 A0A0D9SFI3 127 aa16.99■□□□□ 0.31
CAPN1-216ENST00000528739 SDSP20132 328 aa16.99■□□□□ 0.31
CAPN1-216ENST00000528739 MFAP1P55081 439 aaKnown RBP16.99■□□□□ 0.31
CAPN1-216ENST00000528739 FAM47AQ5JRC9 791 aa16.99■□□□□ 0.31
CAPN1-216ENST00000528739 KIAA1755Q5JYT7 1200 aa16.99■□□□□ 0.31
CAPN1-216ENST00000528739 PLEKHH3Q7Z736 793 aa16.99■□□□□ 0.31
CAPN1-216ENST00000528739 SIAH1Q8IUQ4 282 aa16.99■□□□□ 0.31
CAPN1-216ENST00000528739 PORCNQ9H237 461 aa16.99■□□□□ 0.31
CAPN1-216ENST00000528739 OSBPL3Q9H4L5 887 aa16.99■□□□□ 0.31
CAPN1-216ENST00000528739 TSPY2A6NKD2 308 aa16.98■□□□□ 0.31
CAPN1-216ENST00000528739 SPDYE16A6NNV3 312 aaPredicted RBP16.98■□□□□ 0.31
CAPN1-216ENST00000528739 WDR46O15213 610 aaKnown RBP16.98■□□□□ 0.31
CAPN1-216ENST00000528739 CCL5P13501 91 aa16.98■□□□□ 0.31
CAPN1-216ENST00000528739 TFAP4Q01664 338 aa16.98■□□□□ 0.31
CAPN1-216ENST00000528739 IRF5Q13568 498 aa16.98■□□□□ 0.31
CAPN1-216ENST00000528739 CWC27Q6UX04 472 aaKnown RBP16.98■□□□□ 0.31
CAPN1-216ENST00000528739 PXYLP1Q8TE99 480 aa16.98■□□□□ 0.31
CAPN1-216ENST00000528739 IVNS1ABPQ9Y6Y0 642 aa16.98■□□□□ 0.31
CAPN1-216ENST00000528739 HIP1O00291 1037 aa16.97■□□□□ 0.31
CAPN1-216ENST00000528739 INHAP05111 366 aa16.97■□□□□ 0.31
CAPN1-216ENST00000528739 RRP12Q5JTH9 1297 aaKnown RBP16.97■□□□□ 0.31
CAPN1-216ENST00000528739 GPR142Q7Z601 462 aa16.97■□□□□ 0.31
CAPN1-216ENST00000528739 SOCS4Q8WXH5 440 aa16.97■□□□□ 0.31
CAPN1-216ENST00000528739 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.97■□□□□ 0.31
CAPN1-216ENST00000528739 BTBD7Q9P203 1132 aa16.97■□□□□ 0.31
CAPN1-216ENST00000528739 CTDP1Q9Y5B0 961 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-216ENST00000528739 ROBO3Q96MS0 1386 aa16.97■□□□□ 0.31
CAPN1-216ENST00000528739 RANBP6O60518 1105 aaKnown RBP16.96■□□□□ 0.31
CAPN1-216ENST00000528739 CNMDO75829 334 aa16.96■□□□□ 0.31
CAPN1-216ENST00000528739 HSPD1P10809 573 aaKnown RBP16.96■□□□□ 0.31
CAPN1-216ENST00000528739 DSG3P32926 999 aa16.96■□□□□ 0.31
CAPN1-216ENST00000528739 FAM83BQ5T0W9 1011 aa16.96■□□□□ 0.31
CAPN1-216ENST00000528739 ZNF589Q86UQ0 364 aaPredicted RBP16.96■□□□□ 0.31
CAPN1-216ENST00000528739 TICAM2Q86XR7 235 aa16.96■□□□□ 0.31
CAPN1-216ENST00000528739 CHMP4CQ96CF2 233 aa16.96■□□□□ 0.31
CAPN1-216ENST00000528739 ATG4CQ96DT6 458 aa16.96■□□□□ 0.31
CAPN1-216ENST00000528739 CEP95Q96GE4 821 aa16.96■□□□□ 0.31
CAPN1-216ENST00000528739 UNC93B1Q9H1C4 597 aa16.96■□□□□ 0.31
CAPN1-216ENST00000528739 INCENPQ9NQS7 918 aa16.96■□□□□ 0.31
CAPN1-216ENST00000528739 NYAP2Q9P242 653 aa16.96■□□□□ 0.31
CAPN1-216ENST00000528739 GJD2Q9UKL4 321 aa16.96■□□□□ 0.31
CAPN1-216ENST00000528739 CCDC171Q6TFL3 1326 aa16.96■□□□□ 0.3
CAPN1-216ENST00000528739 F5H6K3 240 aa16.95■□□□□ 0.3
CAPN1-216ENST00000528739 TTLL1O95922 423 aa16.95■□□□□ 0.3
CAPN1-216ENST00000528739 FGAP02671 866 aa16.95■□□□□ 0.3
CAPN1-216ENST00000528739 RGS2P41220 211 aa16.95■□□□□ 0.3
CAPN1-216ENST00000528739 SLC4A3P48751 1232 aa16.95■□□□□ 0.3
CAPN1-216ENST00000528739 HAND2P61296 217 aa16.95■□□□□ 0.3
CAPN1-216ENST00000528739 KLRC3Q07444 240 aa16.95■□□□□ 0.3
CAPN1-216ENST00000528739 LBX2Q6XYB7 198 aa16.95■□□□□ 0.3
CAPN1-216ENST00000528739 NCAPG2Q86XI2 1143 aa16.95■□□□□ 0.3
CAPN1-216ENST00000528739 LRRC47Q8N1G4 583 aaKnown RBP16.95■□□□□ 0.3
CAPN1-216ENST00000528739 NKX2-3Q8TAU0 364 aa16.95■□□□□ 0.3
CAPN1-216ENST00000528739 NUP88Q99567 741 aaPredicted RBP16.95■□□□□ 0.3
CAPN1-216ENST00000528739 TFRCP02786 760 aaKnown RBP16.94■□□□□ 0.3
CAPN1-216ENST00000528739 HMGCRP04035 888 aa16.94■□□□□ 0.3
CAPN1-216ENST00000528739 PDE4AP27815 886 aa16.94■□□□□ 0.3
CAPN1-216ENST00000528739 ALX1Q15699 326 aa16.94■□□□□ 0.3
CAPN1-216ENST00000528739 POTEEQ6S8J3 1075 aa16.94■□□□□ 0.3
CAPN1-216ENST00000528739 MB21D1Q8N884 522 aa16.94■□□□□ 0.3
CAPN1-216ENST00000528739 NEDD1Q8NHV4 660 aa16.94■□□□□ 0.3
CAPN1-216ENST00000528739 SPATC1LQ9H0A9 340 aa16.94■□□□□ 0.3
CAPN1-216ENST00000528739 FBXO28Q9NVF7 368 aa16.94■□□□□ 0.3
CAPN1-216ENST00000528739 MTMR4Q9NYA4 1195 aa16.94■□□□□ 0.3
CAPN1-216ENST00000528739 STX8Q9UNK0 236 aa16.94■□□□□ 0.3
CAPN1-216ENST00000528739 MTMR7Q9Y216 660 aa16.94■□□□□ 0.3
CAPN1-216ENST00000528739 FOXP2O15409 715 aa16.93■□□□□ 0.3
CAPN1-216ENST00000528739 NDUFB10O96000 172 aa16.93■□□□□ 0.3
CAPN1-216ENST00000528739 ZKSCAN1P17029 563 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-216ENST00000528739 IKQ13123 557 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-216ENST00000528739 DPP9Q86TI2 863 aa16.93■□□□□ 0.3
CAPN1-216ENST00000528739 MOV10L1Q9BXT6 1211 aaKnown RBP16.93■□□□□ 0.3
CAPN1-216ENST00000528739 MYH8P13535 1937 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms