RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 TPCN1Q9ULQ1 816 aa14.25□□□□□ -0.13
TRAF3IP2-211ENST00000528599 KLF18A0A0U1RQI7 1052 aa14.24□□□□□ -0.13
TRAF3IP2-211ENST00000528599 SPDYE5A6NIY4 337 aa14.24□□□□□ -0.13
TRAF3IP2-211ENST00000528599 EVCP57679 992 aa14.24□□□□□ -0.13
TRAF3IP2-211ENST00000528599 ANKRD1Q15327 319 aa14.24□□□□□ -0.13
TRAF3IP2-211ENST00000528599 PPP4R3BQ5MIZ7 849 aa14.24□□□□□ -0.13
TRAF3IP2-211ENST00000528599 RASAL3Q86YV0 1011 aa14.24□□□□□ -0.13
TRAF3IP2-211ENST00000528599 PNMA1Q8ND90 353 aa14.24□□□□□ -0.13
TRAF3IP2-211ENST00000528599 IL27Q8NEV9 243 aa14.24□□□□□ -0.13
TRAF3IP2-211ENST00000528599 SLC10A4Q96EP9 437 aa14.24□□□□□ -0.13
TRAF3IP2-211ENST00000528599 WDR18Q9BV38 432 aa14.24□□□□□ -0.13
TRAF3IP2-211ENST00000528599 KAT14Q9H8E8 782 aa14.24□□□□□ -0.13
TRAF3IP2-211ENST00000528599 ARHGEF10LQ9HCE6 1279 aa14.24□□□□□ -0.13
TRAF3IP2-211ENST00000528599 TMX2Q9Y320 296 aa14.24□□□□□ -0.13
TRAF3IP2-211ENST00000528599 PHIPQ8WWQ0 1821 aa14.24□□□□□ -0.13
TRAF3IP2-211ENST00000528599 CCDC69A6NI79 296 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 ZNF157P51786 506 aaPredicted RBP14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 SPP2Q13103 211 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 APOA5Q6Q788 366 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 ERO1BQ86YB8 467 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 RAB11FIP4Q86YS3 637 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 ZNF654Q8IZM8 581 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 ZNF280CQ8ND82 737 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 MYL10Q9BUA6 226 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 AFG3L2Q9Y4W6 797 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 MYH4Q9Y623 1939 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 LARGE1O95461 756 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 SLC10A3P09131 477 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 GJA5P36382 358 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 PPATQ06203 517 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 KIAA1755Q5JYT7 1200 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 RASGRP2Q7LDG7 609 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 CHMP4CQ96CF2 233 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 OPTNQ96CV9 577 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 OTUD5Q96G74 571 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 AS3MTQ9HBK9 375 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 LIMCH1Q9UPQ0 1083 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 SLC12A7Q9Y666 1083 aa14.23□□□□□ -0.13
TRAF3IP2-211ENST00000528599 TRIM75PA6NK02 468 aa14.22□□□□□ -0.13
TRAF3IP2-211ENST00000528599 RXRAP19793 462 aa14.22□□□□□ -0.13
TRAF3IP2-211ENST00000528599 PDIA3P30101 505 aaKnown RBP14.22□□□□□ -0.13
TRAF3IP2-211ENST00000528599 TROAPQ12815 778 aa14.22□□□□□ -0.13
TRAF3IP2-211ENST00000528599 DGKZQ13574 1117 aa14.22□□□□□ -0.13
TRAF3IP2-211ENST00000528599 ZYXQ15942 572 aaKnown RBP14.22□□□□□ -0.13
TRAF3IP2-211ENST00000528599 CATIPQ7Z7H3 387 aa14.22□□□□□ -0.13
TRAF3IP2-211ENST00000528599 SNX21Q969T3 373 aa14.22□□□□□ -0.13
TRAF3IP2-211ENST00000528599 FEZ1Q99689 392 aa14.22□□□□□ -0.13
TRAF3IP2-211ENST00000528599 KIAA1683Q9H0B3 1180 aa14.22□□□□□ -0.13
TRAF3IP2-211ENST00000528599 NAP1L2Q9ULW6 460 aaPredicted RBP14.22□□□□□ -0.13
TRAF3IP2-211ENST00000528599 SYNPO2Q9UMS6 1093 aa14.22□□□□□ -0.13
TRAF3IP2-211ENST00000528599 HPS5Q9UPZ3 1129 aa14.22□□□□□ -0.13
TRAF3IP2-211ENST00000528599 MTMR7Q9Y216 660 aa14.22□□□□□ -0.13
TRAF3IP2-211ENST00000528599 GOLGA8BA8MQT2 603 aa14.21□□□□□ -0.13
TRAF3IP2-211ENST00000528599 USP17L10C9JJH3 530 aa14.21□□□□□ -0.13
TRAF3IP2-211ENST00000528599 F5H6K3 240 aa14.21□□□□□ -0.13
TRAF3IP2-211ENST00000528599 IRF6O14896 467 aa14.21□□□□□ -0.13
TRAF3IP2-211ENST00000528599 BACE1P56817 501 aa14.21□□□□□ -0.13
TRAF3IP2-211ENST00000528599 KLRC3Q07444 240 aa14.21□□□□□ -0.13
TRAF3IP2-211ENST00000528599 MKRN3Q13064 507 aaKnown RBP14.21□□□□□ -0.13
TRAF3IP2-211ENST00000528599 PPIL2Q13356 520 aa14.21□□□□□ -0.13
TRAF3IP2-211ENST00000528599 MTMR2Q13614 643 aa14.21□□□□□ -0.13
TRAF3IP2-211ENST00000528599 ME3Q16798 604 aa14.21□□□□□ -0.13
TRAF3IP2-211ENST00000528599 ZNF274Q96GC6 653 aaPredicted RBP14.21□□□□□ -0.13
TRAF3IP2-211ENST00000528599 TBC1D2Q9BYX2 928 aa14.21□□□□□ -0.13
TRAF3IP2-211ENST00000528599 ZBTB43O43298 467 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 DDAH1O94760 285 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 NDUFB10O96000 172 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 MCM2P49736 904 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 STK3Q13188 491 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 SLFN13Q68D06 897 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 SYNE3Q6ZMZ3 975 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 MICU3Q86XE3 530 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 CCDC144CPQ8IYA2 1237 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 GMCL1P1Q8NEA9 526 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 NUP133Q8WUM0 1156 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 WNK4Q96J92 1243 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 ANP32EQ9BTT0 268 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 SH2D4AQ9H788 454 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 VCPKMTQ9H867 229 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 EMILIN3Q9NT22 766 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 RAD21O60216 631 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 SNHG28P0DPA3 235 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 PDHBP11177 359 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 HMGCS2P54868 508 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 SPICE1Q8N0Z3 855 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 NECAB1Q8N987 351 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 TMX3Q96JJ7 454 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 GOPCQ9HD26 462 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 FAM217BQ9NTX9 383 aaPredicted RBP14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 KCNH4Q9UQ05 1017 aa14.2□□□□□ -0.14
TRAF3IP2-211ENST00000528599 PFKFB2O60825 505 aa14.19□□□□□ -0.14
TRAF3IP2-211ENST00000528599 CCT2P78371 535 aaKnown RBP14.19□□□□□ -0.14
TRAF3IP2-211ENST00000528599 ST3GAL1Q11201 340 aa14.19□□□□□ -0.14
TRAF3IP2-211ENST00000528599 GRM4Q14833 912 aa14.19□□□□□ -0.14
TRAF3IP2-211ENST00000528599 SH3D19Q5HYK7 790 aa14.19□□□□□ -0.14
TRAF3IP2-211ENST00000528599 SPRYD7Q5W111 196 aa14.19□□□□□ -0.14
TRAF3IP2-211ENST00000528599 USP17L2Q6R6M4 530 aa14.19□□□□□ -0.14
TRAF3IP2-211ENST00000528599 FANCBQ8NB91 859 aa14.19□□□□□ -0.14
TRAF3IP2-211ENST00000528599 CCDC102AQ96A19 550 aa14.19□□□□□ -0.14
TRAF3IP2-211ENST00000528599 ZSCAN31Q96LW9 406 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms