RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 TOMM22Q9NS69 142 aa10.84□□□□□ -0.67
CMTM1-210ENST00000528441 GABRQQ9UN88 632 aa10.84□□□□□ -0.67
CMTM1-210ENST00000528441 POTEFA5A3E0 1075 aa10.83□□□□□ -0.68
CMTM1-210ENST00000528441 ADCY3O60266 1144 aa10.83□□□□□ -0.68
CMTM1-210ENST00000528441 VCAM1P19320 739 aa10.83□□□□□ -0.68
CMTM1-210ENST00000528441 FLT3LGP49771 235 aa10.83□□□□□ -0.68
CMTM1-210ENST00000528441 CAP1Q01518 475 aa10.83□□□□□ -0.68
CMTM1-210ENST00000528441 C12orf60Q5U649 245 aa10.83□□□□□ -0.68
CMTM1-210ENST00000528441 CTR9Q6PD62 1173 aa10.83□□□□□ -0.68
CMTM1-210ENST00000528441 CLEC10AQ8IUN9 316 aa10.83□□□□□ -0.68
CMTM1-210ENST00000528441 SPICE1Q8N0Z3 855 aa10.83□□□□□ -0.68
CMTM1-210ENST00000528441 PI4K2BQ8TCG2 481 aa10.83□□□□□ -0.68
CMTM1-210ENST00000528441 ARMC5Q96C12 935 aa10.83□□□□□ -0.68
CMTM1-210ENST00000528441 ZNF333Q96JL9 665 aa10.83□□□□□ -0.68
CMTM1-210ENST00000528441 RNF208Q9H0X6 261 aa10.83□□□□□ -0.68
CMTM1-210ENST00000528441 EMILIN3Q9NT22 766 aa10.83□□□□□ -0.68
CMTM1-210ENST00000528441 IVNS1ABPQ9Y6Y0 642 aa10.83□□□□□ -0.68
CMTM1-210ENST00000528441 FLOT1O75955 427 aa10.82□□□□□ -0.68
CMTM1-210ENST00000528441 ELNP15502 786 aa10.82□□□□□ -0.68
CMTM1-210ENST00000528441 CYP2B6P20813 491 aa10.82□□□□□ -0.68
CMTM1-210ENST00000528441 CTGFP29279 349 aa10.82□□□□□ -0.68
CMTM1-210ENST00000528441 PDE1AP54750 535 aa10.82□□□□□ -0.68
CMTM1-210ENST00000528441 GABPAQ06546 454 aa10.82□□□□□ -0.68
CMTM1-210ENST00000528441 PDE4BQ07343 736 aa10.82□□□□□ -0.68
CMTM1-210ENST00000528441 CCDC129Q6ZRS4 1044 aa10.82□□□□□ -0.68
CMTM1-210ENST00000528441 C16orf86Q6ZW13 317 aa10.82□□□□□ -0.68
CMTM1-210ENST00000528441 CHD1LQ86WJ1 897 aa10.82□□□□□ -0.68
CMTM1-210ENST00000528441 SEC62Q99442 399 aaKnown RBP10.82□□□□□ -0.68
CMTM1-210ENST00000528441 NUDT12Q9BQG2 462 aa10.82□□□□□ -0.68
CMTM1-210ENST00000528441 KIAA1683Q9H0B3 1180 aa10.82□□□□□ -0.68
CMTM1-210ENST00000528441 GOPCQ9HD26 462 aa10.82□□□□□ -0.68
CMTM1-210ENST00000528441 GSG1L2A8MUP6 293 aa10.81□□□□□ -0.68
CMTM1-210ENST00000528441 PATL2C9JE40 543 aaKnown RBP10.81□□□□□ -0.68
CMTM1-210ENST00000528441 PEX10O60683 326 aa10.81□□□□□ -0.68
CMTM1-210ENST00000528441 PRDM1O75626 825 aa10.81□□□□□ -0.68
CMTM1-210ENST00000528441 TSPY3P0CV98 308 aa10.81□□□□□ -0.68
CMTM1-210ENST00000528441 TSPY8P0CW00 308 aa10.81□□□□□ -0.68
CMTM1-210ENST00000528441 EN2P19622 333 aaPredicted RBP10.81□□□□□ -0.68
CMTM1-210ENST00000528441 MAPK4P31152 587 aa10.81□□□□□ -0.68
CMTM1-210ENST00000528441 HOXA7P31268 230 aaPredicted RBP10.81□□□□□ -0.68
CMTM1-210ENST00000528441 SLC4A3P48751 1232 aa10.81□□□□□ -0.68
CMTM1-210ENST00000528441 RGS19P49795 217 aa10.81□□□□□ -0.68
CMTM1-210ENST00000528441 ERVK-9P63128 1117 aa10.81□□□□□ -0.68
CMTM1-210ENST00000528441 ERVK-24P63145 666 aa10.81□□□□□ -0.68
CMTM1-210ENST00000528441 GIMAP6Q6P9H5 292 aa10.81□□□□□ -0.68
CMTM1-210ENST00000528441 IFNL3Q8IZI9 196 aa10.81□□□□□ -0.68
CMTM1-210ENST00000528441 C12orf42Q96LP6 360 aa10.81□□□□□ -0.68
CMTM1-210ENST00000528441 DIAPH3Q9NSV4 1193 aa10.81□□□□□ -0.68
CMTM1-210ENST00000528441 INHAP05111 366 aa10.8□□□□□ -0.68
CMTM1-210ENST00000528441 CCL5P13501 91 aa10.8□□□□□ -0.68
CMTM1-210ENST00000528441 EEF2P13639 858 aaKnown RBP10.8□□□□□ -0.68
CMTM1-210ENST00000528441 ZKSCAN1P17029 563 aaPredicted RBP10.8□□□□□ -0.68
CMTM1-210ENST00000528441 GUCY1A2P33402 732 aa10.8□□□□□ -0.68
CMTM1-210ENST00000528441 IKQ13123 557 aaPredicted RBP10.8□□□□□ -0.68
CMTM1-210ENST00000528441 MTFR1Q15390 333 aa10.8□□□□□ -0.68
CMTM1-210ENST00000528441 RRP12Q5JTH9 1297 aaKnown RBP10.8□□□□□ -0.68
CMTM1-210ENST00000528441 ZMYM1Q5SVZ6 1142 aa10.8□□□□□ -0.68
CMTM1-210ENST00000528441 CATSPERGQ6ZRH7 1159 aa10.8□□□□□ -0.68
CMTM1-210ENST00000528441 NKX2-3Q8TAU0 364 aa10.8□□□□□ -0.68
CMTM1-210ENST00000528441 SOCS4Q8WXH5 440 aa10.8□□□□□ -0.68
CMTM1-210ENST00000528441 CHMP4CQ96CF2 233 aa10.8□□□□□ -0.68
CMTM1-210ENST00000528441 KANSL2Q9H9L4 492 aa10.8□□□□□ -0.68
CMTM1-210ENST00000528441 MTMR7Q9Y216 660 aa10.8□□□□□ -0.68
CMTM1-210ENST00000528441 TSPY2A6NKD2 308 aa10.79□□□□□ -0.68
CMTM1-210ENST00000528441 SMIM22K7EJ46 135 aa10.79□□□□□ -0.68
CMTM1-210ENST00000528441 WDR46O15213 610 aaKnown RBP10.79□□□□□ -0.68
CMTM1-210ENST00000528441 IGHDP01880 384 aa10.79□□□□□ -0.68
CMTM1-210ENST00000528441 TFRCP02786 760 aaKnown RBP10.79□□□□□ -0.68
CMTM1-210ENST00000528441 RGS2P41220 211 aa10.79□□□□□ -0.68
CMTM1-210ENST00000528441 MFAP1P55081 439 aaKnown RBP10.79□□□□□ -0.68
CMTM1-210ENST00000528441 PPARAQ07869 468 aa10.79□□□□□ -0.68
CMTM1-210ENST00000528441 COG2Q14746 738 aa10.79□□□□□ -0.68
CMTM1-210ENST00000528441 SBK1Q52WX2 424 aa10.79□□□□□ -0.68
CMTM1-210ENST00000528441 PLEKHH3Q7Z736 793 aa10.79□□□□□ -0.68
CMTM1-210ENST00000528441 NCAPG2Q86XI2 1143 aa10.79□□□□□ -0.68
CMTM1-210ENST00000528441 LPAR1Q92633 364 aa10.79□□□□□ -0.68
CMTM1-210ENST00000528441 VCPKMTQ9H867 229 aa10.79□□□□□ -0.68
CMTM1-210ENST00000528441 EPB41L4AQ9HCS5 686 aaPredicted RBP10.79□□□□□ -0.68
CMTM1-210ENST00000528441 TXNRD2Q9NNW7 524 aa10.79□□□□□ -0.68
CMTM1-210ENST00000528441 HELLSQ9NRZ9 838 aa10.79□□□□□ -0.68
CMTM1-210ENST00000528441 HOXC10Q9NYD6 342 aa10.79□□□□□ -0.68
CMTM1-210ENST00000528441 MORF4L1Q9UBU8 362 aa10.79□□□□□ -0.68
CMTM1-210ENST00000528441 RABGAP1Q9Y3P9 1069 aa10.79□□□□□ -0.68
CMTM1-210ENST00000528441 A0A1W2PRG0 241 aa10.78□□□□□ -0.68
CMTM1-210ENST00000528441 SPDYE16A6NNV3 312 aaPredicted RBP10.78□□□□□ -0.68
CMTM1-210ENST00000528441 RANBP6O60518 1105 aaKnown RBP10.78□□□□□ -0.68
CMTM1-210ENST00000528441 HMGCRP04035 888 aa10.78□□□□□ -0.68
CMTM1-210ENST00000528441 PYGBP11216 843 aa10.78□□□□□ -0.68
CMTM1-210ENST00000528441 NMIQ13287 307 aaPredicted RBP10.78□□□□□ -0.68
CMTM1-210ENST00000528441 IRF5Q13568 498 aa10.78□□□□□ -0.68
CMTM1-210ENST00000528441 MCMDC2Q4G0Z9 681 aa10.78□□□□□ -0.68
CMTM1-210ENST00000528441 FAM47AQ5JRC9 791 aa10.78□□□□□ -0.68
CMTM1-210ENST00000528441 LHX8Q68G74 356 aa10.78□□□□□ -0.68
CMTM1-210ENST00000528441 GPR142Q7Z601 462 aa10.78□□□□□ -0.68
CMTM1-210ENST00000528441 SMC5Q8IY18 1101 aa10.78□□□□□ -0.68
CMTM1-210ENST00000528441 LRRC47Q8N1G4 583 aaKnown RBP10.78□□□□□ -0.68
CMTM1-210ENST00000528441 UNC93B1Q9H1C4 597 aa10.78□□□□□ -0.68
CMTM1-210ENST00000528441 RBPJLQ9UBG7 517 aa10.78□□□□□ -0.68
CMTM1-210ENST00000528441 CLIP2Q9UDT6 1046 aa10.78□□□□□ -0.68
CMTM1-210ENST00000528441 STAP2Q9UGK3 403 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms