RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 TAF1CQ15572 869 aaPredicted RBP15.22■□□□□ 0.03
SCN3B-205ENST00000528267 ADCK5Q3MIX3 580 aa15.22■□□□□ 0.03
SCN3B-205ENST00000528267 MB21D2Q8IYB1 491 aaPredicted RBP15.22■□□□□ 0.03
SCN3B-205ENST00000528267 SPICE1Q8N0Z3 855 aa15.22■□□□□ 0.03
SCN3B-205ENST00000528267 KCNB2Q92953 911 aa15.22■□□□□ 0.03
SCN3B-205ENST00000528267 MKL1Q969V6 931 aa15.22■□□□□ 0.03
SCN3B-205ENST00000528267 RNF41Q9H4P4 317 aaPredicted RBP15.22■□□□□ 0.03
SCN3B-205ENST00000528267 ARHGEF10LQ9HCE6 1279 aa15.22■□□□□ 0.03
SCN3B-205ENST00000528267 ZCCHC17Q9NP64 241 aaKnown RBP15.22■□□□□ 0.03
SCN3B-205ENST00000528267 TCP11L1Q9NUJ3 509 aa15.22■□□□□ 0.03
SCN3B-205ENST00000528267 CLIP2Q9UDT6 1046 aa15.22■□□□□ 0.03
SCN3B-205ENST00000528267 MGAMO43451 1857 aa15.22■□□□□ 0.03
SCN3B-205ENST00000528267 TTLL1O95922 423 aa15.21■□□□□ 0.03
SCN3B-205ENST00000528267 HOXA7P31268 230 aaPredicted RBP15.21■□□□□ 0.03
SCN3B-205ENST00000528267 LBX1P52954 281 aa15.21■□□□□ 0.03
SCN3B-205ENST00000528267 CHST3Q7LGC8 479 aa15.21■□□□□ 0.03
SCN3B-205ENST00000528267 ESR2Q92731 530 aa15.21■□□□□ 0.03
SCN3B-205ENST00000528267 NUP88Q99567 741 aaPredicted RBP15.21■□□□□ 0.03
SCN3B-205ENST00000528267 ASCC2Q9H1I8 757 aaPredicted RBP15.21■□□□□ 0.03
SCN3B-205ENST00000528267 RPAP3Q9H6T3 665 aaPredicted RBP15.21■□□□□ 0.03
SCN3B-205ENST00000528267 SENP2Q9HC62 589 aa15.21■□□□□ 0.03
SCN3B-205ENST00000528267 SLC45A1Q9Y2W3 748 aa15.21■□□□□ 0.03
SCN3B-205ENST00000528267 NDUFB10O96000 172 aa15.2■□□□□ 0.02
SCN3B-205ENST00000528267 ALDH1A1P00352 501 aa15.2■□□□□ 0.02
SCN3B-205ENST00000528267 CTGFP29279 349 aa15.2■□□□□ 0.02
SCN3B-205ENST00000528267 HSPA4P34932 840 aa15.2■□□□□ 0.02
SCN3B-205ENST00000528267 USP14P54578 494 aa15.2■□□□□ 0.02
SCN3B-205ENST00000528267 SEC23AQ15436 765 aa15.2■□□□□ 0.02
SCN3B-205ENST00000528267 C17orf99Q6UX52 265 aa15.2■□□□□ 0.02
SCN3B-205ENST00000528267 TMEM47Q9BQJ4 181 aa15.2■□□□□ 0.02
SCN3B-205ENST00000528267 USP26Q9BXU7 913 aa15.2■□□□□ 0.02
SCN3B-205ENST00000528267 GPHNQ9NQX3 736 aaPredicted RBP15.2■□□□□ 0.02
SCN3B-205ENST00000528267 TMOD4Q9NZQ9 345 aa15.2■□□□□ 0.02
SCN3B-205ENST00000528267 CPA4Q9UI42 421 aa15.2■□□□□ 0.02
SCN3B-205ENST00000528267 STX8Q9UNK0 236 aa15.2■□□□□ 0.02
SCN3B-205ENST00000528267 F5H6K3 240 aa15.19■□□□□ 0.02
SCN3B-205ENST00000528267 GPR25O00155 361 aa15.19■□□□□ 0.02
SCN3B-205ENST00000528267 TLR2O60603 784 aa15.19■□□□□ 0.02
SCN3B-205ENST00000528267 BCRP11274 1271 aa15.19■□□□□ 0.02
SCN3B-205ENST00000528267 KLRC3Q07444 240 aa15.19■□□□□ 0.02
SCN3B-205ENST00000528267 CATSPERGQ6ZRH7 1159 aa15.19■□□□□ 0.02
SCN3B-205ENST00000528267 ENAHQ8N8S7 591 aaPredicted RBP15.19■□□□□ 0.02
SCN3B-205ENST00000528267 CHMP4CQ96CF2 233 aa15.19■□□□□ 0.02
SCN3B-205ENST00000528267 P2RX7Q99572 595 aaKnown RBP15.19■□□□□ 0.02
SCN3B-205ENST00000528267 KRT23Q9C075 422 aa15.19■□□□□ 0.02
SCN3B-205ENST00000528267 TXNRD2Q9NNW7 524 aa15.19■□□□□ 0.02
SCN3B-205ENST00000528267 FBXO28Q9NVF7 368 aa15.19■□□□□ 0.02
SCN3B-205ENST00000528267 HTTP42858 3142 aa15.19■□□□□ 0.02
SCN3B-205ENST00000528267 TNKSO95271 1327 aa15.18■□□□□ 0.02
SCN3B-205ENST00000528267 PLXNB2O15031 1838 aa15.18■□□□□ 0.02
SCN3B-205ENST00000528267 SPDYE16A6NNV3 312 aaPredicted RBP15.18■□□□□ 0.02
SCN3B-205ENST00000528267 CNMDO75829 334 aa15.18■□□□□ 0.02
SCN3B-205ENST00000528267 CTCFP49711 727 aaPredicted RBP15.18■□□□□ 0.02
SCN3B-205ENST00000528267 TSGA10IPQ3SY00 556 aa15.18■□□□□ 0.02
SCN3B-205ENST00000528267 FAM83BQ5T0W9 1011 aa15.18■□□□□ 0.02
SCN3B-205ENST00000528267 OTUD7BQ6GQQ9 843 aa15.18■□□□□ 0.02
SCN3B-205ENST00000528267 GMCL1P1Q8NEA9 526 aa15.18■□□□□ 0.02
SCN3B-205ENST00000528267 ZNF296Q8WUU4 475 aaPredicted RBP15.18■□□□□ 0.02
SCN3B-205ENST00000528267 ZSCAN10Q96SZ4 725 aaPredicted RBP15.18■□□□□ 0.02
SCN3B-205ENST00000528267 PARK7Q99497 189 aaKnown RBP15.18■□□□□ 0.02
SCN3B-205ENST00000528267 BEGAINQ9BUH8 593 aa15.18■□□□□ 0.02
SCN3B-205ENST00000528267 CNNM2Q9H8M5 875 aa15.18■□□□□ 0.02
SCN3B-205ENST00000528267 ZFYVE28Q9HCC9 887 aa15.18■□□□□ 0.02
SCN3B-205ENST00000528267 SNX14Q9Y5W7 946 aa15.18■□□□□ 0.02
SCN3B-205ENST00000528267 WDR46O15213 610 aaKnown RBP15.17■□□□□ 0.02
SCN3B-205ENST00000528267 REC8O95072 547 aa15.17■□□□□ 0.02
SCN3B-205ENST00000528267 HERVK_113P62684 666 aa15.17■□□□□ 0.02
SCN3B-205ENST00000528267 NCOA7Q8NI08 942 aa15.17■□□□□ 0.02
SCN3B-205ENST00000528267 ANKS1AQ92625 1134 aa15.17■□□□□ 0.02
SCN3B-205ENST00000528267 LPAR1Q92633 364 aa15.17■□□□□ 0.02
SCN3B-205ENST00000528267 ARHGAP39Q9C0H5 1083 aa15.17■□□□□ 0.02
SCN3B-205ENST00000528267 SH2D4AQ9H788 454 aa15.17■□□□□ 0.02
SCN3B-205ENST00000528267 DOCK3Q8IZD9 2030 aa15.17■□□□□ 0.02
SCN3B-205ENST00000528267 USP17L15C9J2P7 530 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 USP17L13C9JLJ4 530 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 USP17L11C9JVI0 530 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 USP17L18D6R9N7 530 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 USP17L22D6RA61 530 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 USP17L17D6RBQ6 530 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 USP17L19D6RCP7 530 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 USP17L20D6RJB6 530 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 CPA1P15085 419 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 USP17L24Q0WX57 530 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 NOM1Q5C9Z4 860 aaKnown RBP15.16■□□□□ 0.02
SCN3B-205ENST00000528267 SLFN13Q68D06 897 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 DGKHQ86XP1 1220 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 IGDCC4Q8TDY8 1250 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 TCEANC2Q96MN5 208 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 GOPCQ9HD26 462 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 RBPJLQ9UBG7 517 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 SYNPO2Q9UMS6 1093 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 SMCHD1A6NHR9 2005 aa15.16■□□□□ 0.02
SCN3B-205ENST00000528267 RAD21O60216 631 aa15.15■□□□□ 0.02
SCN3B-205ENST00000528267 SNHG28P0DPA3 235 aa15.15■□□□□ 0.02
SCN3B-205ENST00000528267 TOP1P11387 765 aaKnown RBP15.15■□□□□ 0.02
SCN3B-205ENST00000528267 OSBPP22059 807 aa15.15■□□□□ 0.02
SCN3B-205ENST00000528267 MCCP23508 829 aa15.15■□□□□ 0.02
SCN3B-205ENST00000528267 NT5C2P49902 561 aa15.15■□□□□ 0.02
SCN3B-205ENST00000528267 Q3C1V9 767 aa15.15■□□□□ 0.02
SCN3B-205ENST00000528267 RALYLQ86SE5 291 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms