RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 ODF2Q5BJF6 829 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 NOSTRINQ8IVI9 506 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 DIS3L2Q8IYB7 885 aaKnown RBP13.98□□□□□ -0.17
TSKU-203ENST00000527881 TSEN2Q8NCE0 465 aaKnown RBP13.98□□□□□ -0.17
TSKU-203ENST00000527881 FAXDC2Q96IV6 333 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 HAUS2Q9NVX0 235 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 RIPOR2Q9Y4F9 1068 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 CHD1O14646 1710 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 IGKV5-2P06315 115 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 NR1D1P20393 614 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 GUCY2FP51841 1108 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 VAV2P52735 878 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 EPHB4P54760 987 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 PTPN12Q05209 780 aaKnown RBP13.98□□□□□ -0.17
TSKU-203ENST00000527881 SF3A3Q12874 501 aaKnown RBP eCLIP13.98□□□□□ -0.17
TSKU-203ENST00000527881 RSRC1Q96IZ7 334 aaKnown RBP13.98□□□□□ -0.17
TSKU-203ENST00000527881 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.98□□□□□ -0.17
TSKU-203ENST00000527881 DDX20Q9UHI6 824 aaKnown RBP13.98□□□□□ -0.17
TSKU-203ENST00000527881 ZBTB43O43298 467 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 COPB1P53618 953 aaKnown RBP13.98□□□□□ -0.17
TSKU-203ENST00000527881 CYP27A1Q02318 531 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 GCKRQ14397 625 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 NLRP14Q86W24 1093 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 GPIHBP1Q8IV16 184 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 AENQ8WTP8 325 aaKnown RBP13.98□□□□□ -0.17
TSKU-203ENST00000527881 OSBP2Q969R2 916 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 CSRNP2Q9H175 543 aa13.98□□□□□ -0.17
TSKU-203ENST00000527881 RBM28Q9NW13 759 aaKnown RBP13.98□□□□□ -0.17
TSKU-203ENST00000527881 MYH15Q9Y2K3 1946 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 MAP2K1Q02750 393 aaPredicted RBP13.97□□□□□ -0.17
TSKU-203ENST00000527881 SSRP1Q08945 709 aaKnown RBP13.97□□□□□ -0.17
TSKU-203ENST00000527881 KIF5AQ12840 1032 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 TTF1Q15361 905 aaPredicted RBP13.97□□□□□ -0.17
TSKU-203ENST00000527881 C8orf74Q6P047 294 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 CYB5D1Q6P9G0 228 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 ZIM3Q96PE6 472 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 COPRSQ9NQ92 184 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 SMARCAL1Q9NZC9 954 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 ANGEL1Q9UNK9 670 aaKnown RBP13.97□□□□□ -0.17
TSKU-203ENST00000527881 ANKRD18BA2A2Z9 1011 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 TMCO5BA8MYB1 307 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 PPP1R37O75864 691 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 CYLC1P35663 651 aaPredicted RBP13.97□□□□□ -0.17
TSKU-203ENST00000527881 PAFAH1B1P43034 410 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 ALS2CLQ60I27 953 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 BLZF1Q9H2G9 400 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 CACNA1FO60840 1977 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 NEURL1BA8MQ27 555 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 TRIM14Q14142 442 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 APTXQ7Z2E3 356 aaKnown RBP13.97□□□□□ -0.17
TSKU-203ENST00000527881 CCDC50Q8IVM0 306 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 XAGE3Q8WTP9 111 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 TBC1D22AQ8WUA7 517 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 REXO2Q9Y3B8 237 aaKnown RBP13.97□□□□□ -0.17
TSKU-203ENST00000527881 PCDHB6Q9Y5E3 794 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 DUSP10Q9Y6W6 482 aa13.97□□□□□ -0.17
TSKU-203ENST00000527881 TTC26A0AVF1 554 aa13.96□□□□□ -0.17
TSKU-203ENST00000527881 KCNJ18B7U540 433 aa13.96□□□□□ -0.17
TSKU-203ENST00000527881 BACH1O14867 736 aa13.96□□□□□ -0.17
TSKU-203ENST00000527881 BUB1BO60566 1050 aaPredicted RBP13.96□□□□□ -0.17
TSKU-203ENST00000527881 SARSP49591 514 aaKnown RBP13.96□□□□□ -0.17
TSKU-203ENST00000527881 ANTXR2P58335 489 aa13.96□□□□□ -0.17
TSKU-203ENST00000527881 KCNJ12Q14500 433 aa13.96□□□□□ -0.17
TSKU-203ENST00000527881 MSL1Q68DK7 614 aa13.96□□□□□ -0.17
TSKU-203ENST00000527881 MYCBPAPQ8TBZ2 947 aa13.96□□□□□ -0.17
TSKU-203ENST00000527881 USP6P35125 1406 aa13.96□□□□□ -0.17
TSKU-203ENST00000527881 A0A087WZG4 1122 aa13.96□□□□□ -0.17
TSKU-203ENST00000527881 FAM237AA0A1B0GTK4 181 aa13.96□□□□□ -0.17
TSKU-203ENST00000527881 TRIM21P19474 475 aaKnown RBP13.96□□□□□ -0.17
TSKU-203ENST00000527881 KCNA4P22459 653 aa13.96□□□□□ -0.17
TSKU-203ENST00000527881 PTPREP23469 700 aa13.96□□□□□ -0.17
TSKU-203ENST00000527881 PBX1P40424 430 aa13.96□□□□□ -0.17
TSKU-203ENST00000527881 IRX1P78414 480 aaPredicted RBP13.96□□□□□ -0.17
TSKU-203ENST00000527881 SPA17Q15506 151 aa13.96□□□□□ -0.17
TSKU-203ENST00000527881 LMBR1LQ6UX01 489 aa13.96□□□□□ -0.17
TSKU-203ENST00000527881 COPS6Q7L5N1 327 aa13.96□□□□□ -0.17
TSKU-203ENST00000527881 EPSTI1Q96J88 318 aa13.96□□□□□ -0.17
TSKU-203ENST00000527881 SKOR1P84550 965 aa13.96□□□□□ -0.18
TSKU-203ENST00000527881 SPAG1Q07617 926 aa13.96□□□□□ -0.18
TSKU-203ENST00000527881 PTGISQ16647 500 aa13.96□□□□□ -0.18
TSKU-203ENST00000527881 PAPD7Q5XG87 772 aaKnown RBP13.96□□□□□ -0.18
TSKU-203ENST00000527881 MB21D2Q8IYB1 491 aaPredicted RBP13.96□□□□□ -0.18
TSKU-203ENST00000527881 SPDL1Q96EA4 605 aa13.96□□□□□ -0.18
TSKU-203ENST00000527881 FBXO2Q9UK22 296 aaPredicted RBP13.96□□□□□ -0.18
TSKU-203ENST00000527881 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.96□□□□□ -0.182e-6■■■■■ 55.4
TSKU-203ENST00000527881 ITSN1Q15811 1721 aa13.95□□□□□ -0.18
TSKU-203ENST00000527881 NR5A1Q13285 461 aa13.95□□□□□ -0.18
TSKU-203ENST00000527881 AP1ARQ63HQ0 302 aa13.95□□□□□ -0.18
TSKU-203ENST00000527881 ABTB2Q8N961 1025 aa13.95□□□□□ -0.18
TSKU-203ENST00000527881 SMCR8Q8TEV9 937 aaPredicted RBP13.95□□□□□ -0.18
TSKU-203ENST00000527881 LACRTQ9GZZ8 138 aa13.95□□□□□ -0.18
TSKU-203ENST00000527881 CABP5Q9NP86 173 aa13.95□□□□□ -0.18
TSKU-203ENST00000527881 DENND2AQ9ULE3 1009 aa13.95□□□□□ -0.18
TSKU-203ENST00000527881 ESYT3A0FGR9 886 aa13.95□□□□□ -0.18
TSKU-203ENST00000527881 ACTN4O43707 911 aaKnown RBP13.95□□□□□ -0.18
TSKU-203ENST00000527881 CCNHP51946 323 aaPredicted RBP13.95□□□□□ -0.18
TSKU-203ENST00000527881 ZKSCAN8Q15776 578 aaPredicted RBP13.95□□□□□ -0.18
TSKU-203ENST00000527881 CDKAL1Q5VV42 579 aa13.95□□□□□ -0.18
TSKU-203ENST00000527881 TRIM22Q8IYM9 498 aa13.95□□□□□ -0.18
TSKU-203ENST00000527881 EEF2KMTQ96G04 330 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms