RNA–Protein interactions for RNA: ENST00000527413.1

SSSCA1-204, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2

Gene SSSCA1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-204ENST00000527413 FARP2O94887 1054 aaPredicted RBP16.31■□□□□ 0.2
SSSCA1-204ENST00000527413 SLC34A2O95436 690 aa16.31■□□□□ 0.2
SSSCA1-204ENST00000527413 TRIM32Q13049 653 aa16.31■□□□□ 0.2
SSSCA1-204ENST00000527413 LRRFIP1Q32MZ4 808 aaKnown RBP16.31■□□□□ 0.2
SSSCA1-204ENST00000527413 SBK1Q52WX2 424 aa16.31■□□□□ 0.2
SSSCA1-204ENST00000527413 KIAA1755Q5JYT7 1200 aa16.31■□□□□ 0.2
SSSCA1-204ENST00000527413 MORN1Q5T089 497 aa16.31■□□□□ 0.2
SSSCA1-204ENST00000527413 GIMAP6Q6P9H5 292 aa16.31■□□□□ 0.2
SSSCA1-204ENST00000527413 PLEKHH3Q7Z736 793 aa16.31■□□□□ 0.2
SSSCA1-204ENST00000527413 SIAH1Q8IUQ4 282 aa16.31■□□□□ 0.2
SSSCA1-204ENST00000527413 LPAR1Q92633 364 aa16.31■□□□□ 0.2
SSSCA1-204ENST00000527413 TANGO6Q9C0B7 1094 aa16.31■□□□□ 0.2
SSSCA1-204ENST00000527413 CWC22Q9HCG8 908 aaKnown RBP16.31■□□□□ 0.2
SSSCA1-204ENST00000527413 EPB41L4AQ9HCS5 686 aaPredicted RBP16.31■□□□□ 0.2
SSSCA1-204ENST00000527413 BTBD7Q9P203 1132 aa16.31■□□□□ 0.2
SSSCA1-204ENST00000527413 TMX2Q9Y320 296 aa16.31■□□□□ 0.2
SSSCA1-204ENST00000527413 RPTORQ8N122 1335 aa16.3■□□□□ 0.2
SSSCA1-204ENST00000527413 XRCC5P13010 732 aaKnown RBP16.3■□□□□ 0.2
SSSCA1-204ENST00000527413 CAPN2P17655 700 aa16.3■□□□□ 0.2
SSSCA1-204ENST00000527413 GNAT2P19087 354 aa16.3■□□□□ 0.2
SSSCA1-204ENST00000527413 RGS2P41220 211 aa16.3■□□□□ 0.2
SSSCA1-204ENST00000527413 USP6NLQ92738 828 aa16.3■□□□□ 0.2
SSSCA1-204ENST00000527413 GCC1Q96CN9 775 aa16.3■□□□□ 0.2
SSSCA1-204ENST00000527413 APBA2Q99767 749 aa16.3■□□□□ 0.2
SSSCA1-204ENST00000527413 FSD1Q9BTV5 496 aa16.3■□□□□ 0.2
SSSCA1-204ENST00000527413 VCPKMTQ9H867 229 aa16.3■□□□□ 0.2
SSSCA1-204ENST00000527413 ZBTB47Q9UFB7 747 aaPredicted RBP16.3■□□□□ 0.2
SSSCA1-204ENST00000527413 ZNFX1Q9P2E3 1918 aaKnown RBP16.29■□□□□ 0.2
SSSCA1-204ENST00000527413 ZKSCAN1P17029 563 aaPredicted RBP16.29■□□□□ 0.2
SSSCA1-204ENST00000527413 HDAC1Q13547 482 aaPredicted RBP16.29■□□□□ 0.2
SSSCA1-204ENST00000527413 COG2Q14746 738 aa16.29■□□□□ 0.2
SSSCA1-204ENST00000527413 WDR78Q5VTH9 848 aa16.29■□□□□ 0.2
SSSCA1-204ENST00000527413 TRMT44Q8IYL2 757 aaKnown RBP16.29■□□□□ 0.2
SSSCA1-204ENST00000527413 SPICE1Q8N0Z3 855 aa16.29■□□□□ 0.2
SSSCA1-204ENST00000527413 CRISPLD2Q9H0B8 497 aa16.29■□□□□ 0.2
SSSCA1-204ENST00000527413 KANSL2Q9H9L4 492 aa16.29■□□□□ 0.2
SSSCA1-204ENST00000527413 HMX1Q9NP08 348 aaPredicted RBP16.29■□□□□ 0.2
SSSCA1-204ENST00000527413 CEP290O15078 2479 aa16.28■□□□□ 0.2
SSSCA1-204ENST00000527413 WDR46O15213 610 aaKnown RBP16.28■□□□□ 0.2
SSSCA1-204ENST00000527413 TFRCP02786 760 aaKnown RBP16.28■□□□□ 0.2
SSSCA1-204ENST00000527413 EEF2P13639 858 aaKnown RBP16.28■□□□□ 0.2
SSSCA1-204ENST00000527413 PRKAR2AP13861 404 aaKnown RBP16.28■□□□□ 0.2
SSSCA1-204ENST00000527413 RASA1P20936 1047 aa16.28■□□□□ 0.2
SSSCA1-204ENST00000527413 TDO2P48775 406 aa16.28■□□□□ 0.2
SSSCA1-204ENST00000527413 ATP2B2Q01814 1243 aa16.28■□□□□ 0.2
SSSCA1-204ENST00000527413 MAP3K21Q5TCX8 1036 aa16.28■□□□□ 0.2
SSSCA1-204ENST00000527413 ANKRD45Q5TZF3 282 aa16.28■□□□□ 0.2
SSSCA1-204ENST00000527413 SEC62Q99442 399 aaKnown RBP16.28■□□□□ 0.2
SSSCA1-204ENST00000527413 HTATIP2Q9BUP3 242 aa16.28■□□□□ 0.2
SSSCA1-204ENST00000527413 HOXC10Q9NYD6 342 aa16.28■□□□□ 0.2
SSSCA1-204ENST00000527413 PLXNA1Q9UIW2 1896 aa16.28■□□□□ 0.2
SSSCA1-204ENST00000527413 MINDY4BA8MYZ0 360 aa16.27■□□□□ 0.2
SSSCA1-204ENST00000527413 FLOT1O75955 427 aa16.27■□□□□ 0.2
SSSCA1-204ENST00000527413 APPP05067 770 aa16.27■□□□□ 0.2
SSSCA1-204ENST00000527413 PTPREP23469 700 aa16.27■□□□□ 0.2
SSSCA1-204ENST00000527413 DSG3P32926 999 aa16.27■□□□□ 0.2
SSSCA1-204ENST00000527413 MAP2K5Q13163 448 aa16.27■□□□□ 0.2
SSSCA1-204ENST00000527413 AAMPQ13685 434 aa16.27■□□□□ 0.2
SSSCA1-204ENST00000527413 CCL14Q16627 93 aa16.27■□□□□ 0.2
SSSCA1-204ENST00000527413 ZMYM1Q5SVZ6 1142 aa16.27■□□□□ 0.2
SSSCA1-204ENST00000527413 STK11IPQ8N1F8 1099 aa16.27■□□□□ 0.2
SSSCA1-204ENST00000527413 IVNS1ABPQ9Y6Y0 642 aa16.27■□□□□ 0.2
SSSCA1-204ENST00000527413 SLC15A5A6NIM6 579 aa16.26■□□□□ 0.19
SSSCA1-204ENST00000527413 GRB14Q14449 540 aa16.26■□□□□ 0.19
SSSCA1-204ENST00000527413 IFNL3Q8IZI9 196 aa16.26■□□□□ 0.19
SSSCA1-204ENST00000527413 MB21D1Q8N884 522 aa16.26■□□□□ 0.19
SSSCA1-204ENST00000527413 ATG4CQ96DT6 458 aa16.26■□□□□ 0.19
SSSCA1-204ENST00000527413 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.26■□□□□ 0.19
SSSCA1-204ENST00000527413 MOV10L1Q9BXT6 1211 aaKnown RBP16.26■□□□□ 0.19
SSSCA1-204ENST00000527413 SPATC1LQ9H0A9 340 aa16.26■□□□□ 0.19
SSSCA1-204ENST00000527413 MKNK2Q9HBH9 465 aa16.26■□□□□ 0.19
SSSCA1-204ENST00000527413 GOPCQ9HD26 462 aa16.26■□□□□ 0.19
SSSCA1-204ENST00000527413 PATL2C9JE40 543 aaKnown RBP16.25■□□□□ 0.19
SSSCA1-204ENST00000527413 CACNB2Q08289 660 aaPredicted RBP16.25■□□□□ 0.19
SSSCA1-204ENST00000527413 ANKLE1Q8NAG6 615 aa16.25■□□□□ 0.19
SSSCA1-204ENST00000527413 SHCBP1Q8NEM2 672 aa16.25■□□□□ 0.19
SSSCA1-204ENST00000527413 DPF3Q92784 378 aa16.25■□□□□ 0.19
SSSCA1-204ENST00000527413 STAP2Q9UGK3 403 aa16.25■□□□□ 0.19
SSSCA1-204ENST00000527413 H0YGN5 161 aa16.24■□□□□ 0.19
SSSCA1-204ENST00000527413 HOXC6P09630 235 aa16.24■□□□□ 0.19
SSSCA1-204ENST00000527413 PDE1AP54750 535 aa16.24■□□□□ 0.19
SSSCA1-204ENST00000527413 DIS3LQ8TF46 1054 aaKnown RBP16.24■□□□□ 0.19
SSSCA1-204ENST00000527413 PAWRQ96IZ0 340 aaKnown RBP16.24■□□□□ 0.19
SSSCA1-204ENST00000527413 NACAP1Q9BZK3 213 aa16.24■□□□□ 0.19
SSSCA1-204ENST00000527413 NAPBQ9H115 298 aa16.24■□□□□ 0.19
SSSCA1-204ENST00000527413 ZNF287Q9HBT7 754 aa16.24■□□□□ 0.19
SSSCA1-204ENST00000527413 PLIN4Q96Q06 1357 aa16.24■□□□□ 0.19
SSSCA1-204ENST00000527413 IGKV6D-41A0A0C4DH26 115 aa16.23■□□□□ 0.19
SSSCA1-204ENST00000527413 RAD21O60216 631 aa16.23■□□□□ 0.19
SSSCA1-204ENST00000527413 PRDM1O75626 825 aa16.23■□□□□ 0.19
SSSCA1-204ENST00000527413 ERCC3P19447 782 aa16.23■□□□□ 0.19
SSSCA1-204ENST00000527413 PLS1Q14651 629 aa16.23■□□□□ 0.19
SSSCA1-204ENST00000527413 FAM83BQ5T0W9 1011 aa16.23■□□□□ 0.19
SSSCA1-204ENST00000527413 SAMD1Q6SPF0 538 aaPredicted RBP16.23■□□□□ 0.19
SSSCA1-204ENST00000527413 NECAB2Q7Z6G3 386 aa16.23■□□□□ 0.19
SSSCA1-204ENST00000527413 EVI5LQ96CN4 794 aa16.23■□□□□ 0.19
SSSCA1-204ENST00000527413 FBXO28Q9NVF7 368 aa16.23■□□□□ 0.19
SSSCA1-204ENST00000527413 FLRT1Q9NZU1 646 aa16.23■□□□□ 0.19
SSSCA1-204ENST00000527413 NYAP2Q9P242 653 aa16.23■□□□□ 0.19
SSSCA1-204ENST00000527413 OGDHLQ9ULD0 1010 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms