RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 ZCCHC4Q9H5U6 513 aa5.15□□□□□ -1.59
CLNS1A-208ENST00000527265 PARD6AQ9NPB6 346 aa5.15□□□□□ -1.59
CLNS1A-208ENST00000527265 DCP1AQ9NPI6 582 aaPredicted RBP5.15□□□□□ -1.59
CLNS1A-208ENST00000527265 PPP4R2Q9NY27 417 aa5.15□□□□□ -1.59
CLNS1A-208ENST00000527265 TTF2Q9UNY4 1162 aaKnown RBP5.15□□□□□ -1.59
CLNS1A-208ENST00000527265 MRVI1Q9Y6F6 885 aa5.15□□□□□ -1.59
CLNS1A-208ENST00000527265 CREB3O43889 395 aa5.14□□□□□ -1.59
CLNS1A-208ENST00000527265 AOC2O75106 756 aa5.14□□□□□ -1.59
CLNS1A-208ENST00000527265 GSTT1P30711 240 aa5.14□□□□□ -1.59
CLNS1A-208ENST00000527265 FCGRTP55899 365 aa5.14□□□□□ -1.59
CLNS1A-208ENST00000527265 RHBDL3P58872 404 aa5.14□□□□□ -1.59
CLNS1A-208ENST00000527265 CHMP4BP1P59074 171 aa5.14□□□□□ -1.59
CLNS1A-208ENST00000527265 CCNJLQ8IV13 435 aa5.14□□□□□ -1.59
CLNS1A-208ENST00000527265 APPBP2Q92624 585 aa5.14□□□□□ -1.59
CLNS1A-208ENST00000527265 C20orf173Q96LM9 149 aa5.14□□□□□ -1.59
CLNS1A-208ENST00000527265 ATXN3LQ9H3M9 355 aa5.14□□□□□ -1.59
CLNS1A-208ENST00000527265 TMX1Q9H3N1 280 aa5.14□□□□□ -1.59
CLNS1A-208ENST00000527265 ABCB6Q9NP58 842 aa5.14□□□□□ -1.59
CLNS1A-208ENST00000527265 SYNGAP1Q96PV0 1343 aa5.14□□□□□ -1.59
CLNS1A-208ENST00000527265 TMEM238LA0A1B0GVL6 79 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 ESYT3A0FGR9 886 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 CCDC85CA6NKD9 419 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 METTL12A8MUP2 240 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 PRC1O43663 620 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 PSPNO60542 156 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 CTSBP07858 339 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 GLDCP23378 1020 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 DTHD1Q6ZMT9 781 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 KIAA0907Q7Z7F0 614 aaPredicted RBP5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 KIAA0825Q8IV33 1275 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 SMYD4Q8IYR2 804 aaPredicted RBP5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 PRPF38AQ8NAV1 312 aaKnown RBP5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 C3orf58Q8NDZ4 430 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 EVI5LQ96CN4 794 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 SGSM3Q96HU1 749 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 CCDC136Q96JN2 1154 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 IER2Q9BTL4 223 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 SPON2Q9BUD6 331 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 KBTBD4Q9NVX7 518 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 PLAGL2Q9UPG8 496 aa5.13□□□□□ -1.59
CLNS1A-208ENST00000527265 SLFN14P0C7P3 912 aa5.12□□□□□ -1.59
CLNS1A-208ENST00000527265 MED14OSP0DP75 135 aa5.12□□□□□ -1.59
CLNS1A-208ENST00000527265 GRIA4P48058 902 aa5.12□□□□□ -1.59
CLNS1A-208ENST00000527265 GYS2P54840 703 aa5.12□□□□□ -1.59
CLNS1A-208ENST00000527265 LINC00310P59036 64 aa5.12□□□□□ -1.59
CLNS1A-208ENST00000527265 SPRED3Q2MJR0 410 aa5.12□□□□□ -1.59
CLNS1A-208ENST00000527265 ARSHQ5FYA8 562 aa5.12□□□□□ -1.59
CLNS1A-208ENST00000527265 ERICH6BQ5W0A0 696 aa5.12□□□□□ -1.59
CLNS1A-208ENST00000527265 LRP10Q7Z4F1 713 aa5.12□□□□□ -1.59
CLNS1A-208ENST00000527265 LILRB2Q8N423 598 aa5.12□□□□□ -1.59
CLNS1A-208ENST00000527265 CCDC120Q96HB5 630 aa5.12□□□□□ -1.59
CLNS1A-208ENST00000527265 WDR18Q9BV38 432 aa5.12□□□□□ -1.59
CLNS1A-208ENST00000527265 DUSP23Q9BVJ7 150 aa5.12□□□□□ -1.59
CLNS1A-208ENST00000527265 TNKS2Q9H2K2 1166 aa5.12□□□□□ -1.59
CLNS1A-208ENST00000527265 STRIP2Q9ULQ0 834 aa5.12□□□□□ -1.59
CLNS1A-208ENST00000527265 AKAP2Q9Y2D5 859 aa5.12□□□□□ -1.59
CLNS1A-208ENST00000527265 EFR3BQ9Y2G0 817 aa5.12□□□□□ -1.59
CLNS1A-208ENST00000527265 A0A096LPE4 126 aa5.11□□□□□ -1.59
CLNS1A-208ENST00000527265 A0A1W2PPZ6 126 aa5.11□□□□□ -1.59
CLNS1A-208ENST00000527265 RNGTTO60942 597 aaKnown RBP5.11□□□□□ -1.59
CLNS1A-208ENST00000527265 PPFIA4O75335 1185 aa5.11□□□□□ -1.59
CLNS1A-208ENST00000527265 NFIXQ14938 502 aa5.11□□□□□ -1.59
CLNS1A-208ENST00000527265 RALBP1Q15311 655 aa5.11□□□□□ -1.59
CLNS1A-208ENST00000527265 FERMT3Q86UX7 667 aa5.11□□□□□ -1.59
CLNS1A-208ENST00000527265 HOMER1Q86YM7 354 aa5.11□□□□□ -1.59
CLNS1A-208ENST00000527265 GINM1Q9NU53 330 aa5.11□□□□□ -1.59
CLNS1A-208ENST00000527265 ADAMTS1Q9UHI8 967 aa5.11□□□□□ -1.59
CLNS1A-208ENST00000527265 GTF2IRD1Q9UHL9 959 aa5.11□□□□□ -1.59
CLNS1A-208ENST00000527265 PPP1R9AQ9ULJ8 1098 aa5.11□□□□□ -1.59
CLNS1A-208ENST00000527265 PPM1HQ9ULR3 514 aa5.11□□□□□ -1.59
CLNS1A-208ENST00000527265 SMG5Q9UPR3 1016 aaKnown RBP5.11□□□□□ -1.59
CLNS1A-208ENST00000527265 THRAP3Q9Y2W1 955 aaKnown RBP5.11□□□□□ -1.59
CLNS1A-208ENST00000527265 U3KQE9 123 aa5.11□□□□□ -1.59
CLNS1A-208ENST00000527265 FBXO24O75426 580 aa5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 LEFTY1O75610 366 aa5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 HCLS1P14317 486 aaPredicted RBP5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 BMP7P18075 431 aa5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 ITPKAP23677 461 aa5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 SOX9P48436 509 aa5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 MASP1P48740 699 aa5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 BIRC2Q13490 618 aa5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 RAVER1Q8IY67 606 aaKnown RBP5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 KCNN1Q92952 543 aa5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 C8orf48Q96LL4 319 aa5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 SLC26A8Q96RN1 970 aa5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 RPS6KC1Q96S38 1066 aa5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 DNAJC7Q99615 494 aa5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 UBA5Q9GZZ9 404 aa5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 GEMIN8Q9NWZ8 242 aaKnown RBP5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 TMEM260Q9NX78 707 aa5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 PRKAG3Q9UGI9 489 aa5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 MSRB2Q9Y3D2 182 aa5.1□□□□□ -1.59
CLNS1A-208ENST00000527265 ETV2O00321 342 aaPredicted RBP5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 TMPRSS2O15393 492 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 GDNFP39905 211 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 ID3Q02535 119 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 AP3B2Q13367 1082 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 CCDC85BQ15834 202 aaPredicted RBP5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 ZNF423Q2M1K9 1284 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 TKFCQ3LXA3 575 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms